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The map label for this gene is ykoQ [H]

Identifier: 226224712

GI number: 226224712

Start: 2186191

End: 2187045

Strand: Reverse

Name: ykoQ [H]

Synonym: Lm4b_02128

Alternate gene names: 226224712

Gene position: 2187045-2186191 (Counterclockwise)

Preceding gene: 226224716

Following gene: 226224708

Centisome position: 75.09

GC content: 36.96

Gene sequence:

>855_bases
ATGGCTTTAAAGATAAAGTGGATTATAGCAATCAGTATGATTATTGTACTTTTAGTTGTAGGATGGTTTTTGGGGACTAG
GCTAACGGTGAAAAAATATGAAGTGAGTTCTGCTAAAATTGAAAAAGAAATTAAACTAGTGCAATTATCGGATTTGCATT
TTAGTGAATTTGGCGATAAGAATGAAAATTTGTTACATAAAGTGGCAAATTTAAATCCAGATGTGATTGCAATTACTGGA
GATCTTTTTGATAGGCAAGGGGATAGTGTTCCTAAAGAGCTTATTAAAAAGCTTACGAAGATTGCGCCGGTTTATTTTTC
GCCGGGGAACCATGAATATGATGTTAAAAATGCCTATGAGGACGATTACAAGCCATTTTTAGAAAAAATTGGTGTAGTTA
ACTTAGAAGATCAAACTGCTACTATCGACGTGGGAGGACAGAAATTTCAAATGTCTGGATTGCGGAGTAGTGCGAATTTA
GATTATGACTATCCTTATTATAAAGAAGGACTAGCAGAAATAAAAAAGCAGCAAGATTCAACGTATTATCAAATTCTTTT
GTCGCATATGCCGGACTATTTTGAGCTTTATGTGGAGAATGGTTTTGATTTAACTTTAAGTGGTCACACGCATGGAGGGA
TTGTGCGTATTCCGTATACGAATATTGGTGCGATTGCTCCAGGACCGCAGCGAACACTTTTGCCGGATTATGTATACGGA
GAACATTCAAAAGATGGAAAGACAATGATAATTTCAGCTGGACTTGGTGCGGGAAGCCTTCATCAAAAAGCATTTCCGAG
GTTAGGAAATCCATATGAAATTGTTGCAGTGACGATAAAGCCAGCGACGAACTGA

Upstream 100 bases:

>100_bases
TTTGAGTCAACACTTAATCTAGGTTATAATGATAGGGGTAACATATAATGGATGACAAAATATTGATAATAAATGGAAAT
AGCAACATAGAGGTGAGAAA

Downstream 100 bases:

>100_bases
AAAAAGAGCCTTCATCAAGGCTCTTTTTTCTATTTAAAGATATGATCCAAATTTGTATGTTCGTCTGACTCGCAATTACA
GGCTTTTTCAAGTTCACAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MALKIKWIIAISMIIVLLVVGWFLGTRLTVKKYEVSSAKIEKEIKLVQLSDLHFSEFGDKNENLLHKVANLNPDVIAITG
DLFDRQGDSVPKELIKKLTKIAPVYFSPGNHEYDVKNAYEDDYKPFLEKIGVVNLEDQTATIDVGGQKFQMSGLRSSANL
DYDYPYYKEGLAEIKKQQDSTYYQILLSHMPDYFELYVENGFDLTLSGHTHGGIVRIPYTNIGAIAPGPQRTLLPDYVYG
EHSKDGKTMIISAGLGAGSLHQKAFPRLGNPYEIVAVTIKPATN

Sequences:

>Translated_284_residues
MALKIKWIIAISMIIVLLVVGWFLGTRLTVKKYEVSSAKIEKEIKLVQLSDLHFSEFGDKNENLLHKVANLNPDVIAITG
DLFDRQGDSVPKELIKKLTKIAPVYFSPGNHEYDVKNAYEDDYKPFLEKIGVVNLEDQTATIDVGGQKFQMSGLRSSANL
DYDYPYYKEGLAEIKKQQDSTYYQILLSHMPDYFELYVENGFDLTLSGHTHGGIVRIPYTNIGAIAPGPQRTLLPDYVYG
EHSKDGKTMIISAGLGAGSLHQKAFPRLGNPYEIVAVTIKPATN
>Mature_283_residues
ALKIKWIIAISMIIVLLVVGWFLGTRLTVKKYEVSSAKIEKEIKLVQLSDLHFSEFGDKNENLLHKVANLNPDVIAITGD
LFDRQGDSVPKELIKKLTKIAPVYFSPGNHEYDVKNAYEDDYKPFLEKIGVVNLEDQTATIDVGGQKFQMSGLRSSANLD
YDYPYYKEGLAEIKKQQDSTYYQILLSHMPDYFELYVENGFDLTLSGHTHGGIVRIPYTNIGAIAPGPQRTLLPDYVYGE
HSKDGKTMIISAGLGAGSLHQKAFPRLGNPYEIVAVTIKPATN

Specific function: Unknown

COG id: COG1408

COG function: function code R; Predicted phosphohydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallophosphoesterase superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081695, Length=205, Percent_Identity=26.8292682926829, Blast_Score=66, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI115535030, Length=196, Percent_Identity=29.5918367346939, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI115535028, Length=196, Percent_Identity=30.1020408163265, Blast_Score=68, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31761; Mature: 31630

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00133 CARBOXYPEPT_ZN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALKIKWIIAISMIIVLLVVGWFLGTRLTVKKYEVSSAKIEKEIKLVQLSDLHFSEFGDK
CEEEEHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCHHHHHHHEEEEEEECCCHHHCCCC
NENLLHKVANLNPDVIAITGDLFDRQGDSVPKELIKKLTKIAPVYFSPGNHEYDVKNAYE
CHHHHHHHHCCCCCEEEEECCHHCCCCCCCHHHHHHHHHHHCCEEECCCCCCCCCCCCCC
DDYKPFLEKIGVVNLEDQTATIDVGGQKFQMSGLRSSANLDYDYPYYKEGLAEIKKQQDS
HHHHHHHHHCCEEEECCCEEEEEECCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCC
TYYQILLSHMPDYFELYVENGFDLTLSGHTHGGIVRIPYTNIGAIAPGPQRTLLPDYVYG
HHHHHHHHHCCHHHEEEEECCEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC
EHSKDGKTMIISAGLGAGSLHQKAFPRLGNPYEIVAVTIKPATN
CCCCCCCEEEEECCCCCCCHHHHHHCCCCCCEEEEEEEEECCCC
>Mature Secondary Structure 
ALKIKWIIAISMIIVLLVVGWFLGTRLTVKKYEVSSAKIEKEIKLVQLSDLHFSEFGDK
EEEEHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCHHHHHHHEEEEEEECCCHHHCCCC
NENLLHKVANLNPDVIAITGDLFDRQGDSVPKELIKKLTKIAPVYFSPGNHEYDVKNAYE
CHHHHHHHHCCCCCEEEEECCHHCCCCCCCHHHHHHHHHHHCCEEECCCCCCCCCCCCCC
DDYKPFLEKIGVVNLEDQTATIDVGGQKFQMSGLRSSANLDYDYPYYKEGLAEIKKQQDS
HHHHHHHHHCCEEEECCCEEEEEECCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCC
TYYQILLSHMPDYFELYVENGFDLTLSGHTHGGIVRIPYTNIGAIAPGPQRTLLPDYVYG
HHHHHHHHHCCHHHEEEEECCEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC
EHSKDGKTMIISAGLGAGSLHQKAFPRLGNPYEIVAVTIKPATN
CCCCCCCEEEEECCCCCCCHHHHHHCCCCCCEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]