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The map label for this gene is acrR [C]

Identifier: 226224694

GI number: 226224694

Start: 2166989

End: 2167579

Strand: Reverse

Name: acrR [C]

Synonym: Lm4b_02109

Alternate gene names: 226224694

Gene position: 2167579-2166989 (Counterclockwise)

Preceding gene: 226224695

Following gene: 226224693

Centisome position: 74.42

GC content: 37.56

Gene sequence:

>591_bases
ATGAGAAAAGAAGAAATCAAACAAGCTGCACTGACACTTTTTGCTAATAACGGTTTTGAAGGAACATCGCTTGCTGATAT
TGCAGGGGTTGTGGGGCTGAAGAAACAATCCATCTATTCTCATTTTAAAGATAAAGATGATTTGTTTTTATCCATTATGA
AGGACGCGAAATCAACAGAAATAGATTACTACCGGGCAAAACTTCGGGATAGTGATTTATCCAGACCAGATCTTGTTTTG
TCTAGTTTACTTTTTGGTGTGAAGGAATTATACGATACGGACGAGGCCTATCAATTTTGGTTGCGTTACGGGTTTTATCC
GCCGAAGCATTTGTATGAAGTGGTCCAAGCAGATATTACCGAGAATGTGCTACAAATGGAACATGAATTTACTAATTTAT
TTAGCAATTGGATGGAGCAAAAGTTAATTCCAATGCAAGATGTGGAAACGATGAAAGAAGCTTATATGGGAATTCTCGAC
GCAGTTATCGTAGACATTGTGTACGTGAACGACCCAGAAAGAACGGAAAAGAAAATTACAGCTTTATGGCAAATTTTCTG
GAGAGGAATTACGCTAAAAGCTTTGAATTAG

Upstream 100 bases:

>100_bases
CCACTCTTTTATTAGAGTGGATTTTTTTGTTGACAAAGAAATTTTTTCGTGAGAGAATGACTTACGAACGGTCGTCAGTT
TTTGCGAGAGGAGTGGAATG

Downstream 100 bases:

>100_bases
AGGTGTAGTATGGCAAAAAATATGGAAATTTTAGAAACAGATTCAGTTAAAAAGATTTACTTTAGATATTTAATTCCTTC
CTTAGTGGGAATGTTGTTAA

Product: transcription regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcription Regulator TetR/AcrR Family; Transcriptional Regulator; Transcription Regulator TetR/AcrR Family Protein; Tetr Family Transcriptional Regulator

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MRKEEIKQAALTLFANNGFEGTSLADIAGVVGLKKQSIYSHFKDKDDLFLSIMKDAKSTEIDYYRAKLRDSDLSRPDLVL
SSLLFGVKELYDTDEAYQFWLRYGFYPPKHLYEVVQADITENVLQMEHEFTNLFSNWMEQKLIPMQDVETMKEAYMGILD
AVIVDIVYVNDPERTEKKITALWQIFWRGITLKALN

Sequences:

>Translated_196_residues
MRKEEIKQAALTLFANNGFEGTSLADIAGVVGLKKQSIYSHFKDKDDLFLSIMKDAKSTEIDYYRAKLRDSDLSRPDLVL
SSLLFGVKELYDTDEAYQFWLRYGFYPPKHLYEVVQADITENVLQMEHEFTNLFSNWMEQKLIPMQDVETMKEAYMGILD
AVIVDIVYVNDPERTEKKITALWQIFWRGITLKALN
>Mature_196_residues
MRKEEIKQAALTLFANNGFEGTSLADIAGVVGLKKQSIYSHFKDKDDLFLSIMKDAKSTEIDYYRAKLRDSDLSRPDLVL
SSLLFGVKELYDTDEAYQFWLRYGFYPPKHLYEVVQADITENVLQMEHEFTNLFSNWMEQKLIPMQDVETMKEAYMGILD
AVIVDIVYVNDPERTEKKITALWQIFWRGITLKALN

Specific function: Potential Regulator Protein For The Acrab Genes. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22840; Mature: 22840

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKEEIKQAALTLFANNGFEGTSLADIAGVVGLKKQSIYSHFKDKDDLFLSIMKDAKSTE
CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCH
IDYYRAKLRDSDLSRPDLVLSSLLFGVKELYDTDEAYQFWLRYGFYPPKHLYEVVQADIT
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
ENVLQMEHEFTNLFSNWMEQKLIPMQDVETMKEAYMGILDAVIVDIVYVNDPERTEKKIT
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
ALWQIFWRGITLKALN
HHHHHHHHCCCEEECC
>Mature Secondary Structure
MRKEEIKQAALTLFANNGFEGTSLADIAGVVGLKKQSIYSHFKDKDDLFLSIMKDAKSTE
CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCH
IDYYRAKLRDSDLSRPDLVLSSLLFGVKELYDTDEAYQFWLRYGFYPPKHLYEVVQADIT
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
ENVLQMEHEFTNLFSNWMEQKLIPMQDVETMKEAYMGILDAVIVDIVYVNDPERTEKKIT
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
ALWQIFWRGITLKALN
HHHHHHHHCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA