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The map label for this gene is ylbC [H]

Identifier: 226224662

GI number: 226224662

Start: 2137337

End: 2138392

Strand: Reverse

Name: ylbC [H]

Synonym: Lm4b_02077

Alternate gene names: 226224662

Gene position: 2138392-2137337 (Counterclockwise)

Preceding gene: 226224663

Following gene: 226224661

Centisome position: 73.42

GC content: 35.42

Gene sequence:

>1056_bases
GTGAAGTTTATAATGCGAGTAGCTGTGCTATTAATCATTTGCCTGTTCATTGGATACAACACAGATCTTTTTTTTAGTAA
ATCAGTAGAGAAAAATACAGCCGAAGATACGGCAACAAAGTCTAATTTTCCTGATAATAAAAAAACAACGAATGAAAATC
CGAAACAAGTGCAAGATAGTTCCAGCTTGGCAAGATTTATTAATAAAAACGTAAGTGAATTAAAGAAAGAGTTTGGGGAC
CCGGTGCGTGTAGACAAAACAGCATACGGTTACGATAATTACATTTATAGTCAACCAGGAACAAGCTATATGCAAGTAGG
TGTAACAAAAAATATCGTGCAAACCATTTATGCGCTAGGACAAGATTTAAATGTCATGCCATATACAATTGGTATGTCCA
CTGAGAAAGTATTTACCGATGCCAACTTACAATCGGAAATATCCTTCAACTATAAAGACAGCTATTATAAATTCGAACTT
TCTGAAGAAGACTTAAATGCCCGTCCAATCGTTAATATTGGAAGTGGCGTTTATGCGCAACTGAATTTCGATAAATTTAA
GTCAAAACTGATTAGTGTTCGTTACCTCAATAAATTATCCTTCGTCAAAATGCGCCCCTATGAATTATCTTACCAAGGTG
AAATTTATGAAGAAAAGTTGACGCCAGCAGATTGGAATGCAATTGATGATGCTTCTAGTAAACAAGTGCTAGAAATCACT
AATGTTATTCGTGATCGATACGGAATAGAAGAAGTAGCTTGGGACGAGTCTGTTGCGAAAGTTGCATATGGACATAGTGT
TGATATGAAGAAAAATGATTATTTTGACCATACTTCACCGACACAAGGAGATCTAAGCAAACGACTTAGTAAAGGGGATG
TCAAATATACTAAAGCTGGTGAAAATATCGCCTATAACTATGTCGATAGTGCAGCAGCAGTAGAAGGTTGGCTCAACTCT
AAAGGACATAGAGAAAATCTACTAGATGGTTCATATACCTATATGGGTGCGGGAACATATCGAAAATACTATACGCAAAA
TTTTATTATTAAATAA

Upstream 100 bases:

>100_bases
ATTGTTTTTTTTATGATTTTTAAAGCTTTTCAAATGATAATAGTATTGGTAAAATGAAAGTTACATCAAGAAAACAAAAT
ACTGCCGAGGAGGGCAAAAT

Downstream 100 bases:

>100_bases
TAGTTCTATGGTATAATAAAAAAGTAAGTTATATGGAGGTGGCTAGATTGCTCGCTACAATGGAAAATATGGCGCTACTC
GATTTATCAGATGAGCTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MKFIMRVAVLLIICLFIGYNTDLFFSKSVEKNTAEDTATKSNFPDNKKTTNENPKQVQDSSSLARFINKNVSELKKEFGD
PVRVDKTAYGYDNYIYSQPGTSYMQVGVTKNIVQTIYALGQDLNVMPYTIGMSTEKVFTDANLQSEISFNYKDSYYKFEL
SEEDLNARPIVNIGSGVYAQLNFDKFKSKLISVRYLNKLSFVKMRPYELSYQGEIYEEKLTPADWNAIDDASSKQVLEIT
NVIRDRYGIEEVAWDESVAKVAYGHSVDMKKNDYFDHTSPTQGDLSKRLSKGDVKYTKAGENIAYNYVDSAAAVEGWLNS
KGHRENLLDGSYTYMGAGTYRKYYTQNFIIK

Sequences:

>Translated_351_residues
MKFIMRVAVLLIICLFIGYNTDLFFSKSVEKNTAEDTATKSNFPDNKKTTNENPKQVQDSSSLARFINKNVSELKKEFGD
PVRVDKTAYGYDNYIYSQPGTSYMQVGVTKNIVQTIYALGQDLNVMPYTIGMSTEKVFTDANLQSEISFNYKDSYYKFEL
SEEDLNARPIVNIGSGVYAQLNFDKFKSKLISVRYLNKLSFVKMRPYELSYQGEIYEEKLTPADWNAIDDASSKQVLEIT
NVIRDRYGIEEVAWDESVAKVAYGHSVDMKKNDYFDHTSPTQGDLSKRLSKGDVKYTKAGENIAYNYVDSAAAVEGWLNS
KGHRENLLDGSYTYMGAGTYRKYYTQNFIIK
>Mature_351_residues
MKFIMRVAVLLIICLFIGYNTDLFFSKSVEKNTAEDTATKSNFPDNKKTTNENPKQVQDSSSLARFINKNVSELKKEFGD
PVRVDKTAYGYDNYIYSQPGTSYMQVGVTKNIVQTIYALGQDLNVMPYTIGMSTEKVFTDANLQSEISFNYKDSYYKFEL
SEEDLNARPIVNIGSGVYAQLNFDKFKSKLISVRYLNKLSFVKMRPYELSYQGEIYEEKLTPADWNAIDDASSKQVLEIT
NVIRDRYGIEEVAWDESVAKVAYGHSVDMKKNDYFDHTSPTQGDLSKRLSKGDVKYTKAGENIAYNYVDSAAAVEGWLNS
KGHRENLLDGSYTYMGAGTYRKYYTQNFIIK

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SCP domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014044 [H]

Pfam domain/function: PF00188 SCP [H]

EC number: NA

Molecular weight: Translated: 40051; Mature: 40051

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFIMRVAVLLIICLFIGYNTDLFFSKSVEKNTAEDTATKSNFPDNKKTTNENPKQVQDS
CHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHH
SSLARFINKNVSELKKEFGDPVRVDKTAYGYDNYIYSQPGTSYMQVGVTKNIVQTIYALG
HHHHHHHHCCHHHHHHHCCCCEEECCEECCCCCEEECCCCCCEEEECCHHHHHHHHHHHC
QDLNVMPYTIGMSTEKVFTDANLQSEISFNYKDSYYKFELSEEDLNARPIVNIGSGVYAQ
CCCCCEEEEECCCHHHEEECCCCCCEEEECCCCCEEEEEECCCCCCCCCEEEECCCEEEE
LNFDKFKSKLISVRYLNKLSFVKMRPYELSYQGEIYEEKLTPADWNAIDDASSKQVLEIT
ECHHHHHHHHHHHHHHHHHHEEEECCEEECCCCCHHHHCCCCCCCCCCCCCCCHHHHHHH
NVIRDRYGIEEVAWDESVAKVAYGHSVDMKKNDYFDHTSPTQGDLSKRLSKGDVKYTKAG
HHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECC
ENIAYNYVDSAAAVEGWLNSKGHRENLLDGSYTYMGAGTYRKYYTQNFIIK
CCEEEEHHHHHHHHHHHHCCCCCHHHCCCCCEEEECCCHHHHHHCCCCCCC
>Mature Secondary Structure
MKFIMRVAVLLIICLFIGYNTDLFFSKSVEKNTAEDTATKSNFPDNKKTTNENPKQVQDS
CHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHH
SSLARFINKNVSELKKEFGDPVRVDKTAYGYDNYIYSQPGTSYMQVGVTKNIVQTIYALG
HHHHHHHHCCHHHHHHHCCCCEEECCEECCCCCEEECCCCCCEEEECCHHHHHHHHHHHC
QDLNVMPYTIGMSTEKVFTDANLQSEISFNYKDSYYKFELSEEDLNARPIVNIGSGVYAQ
CCCCCEEEEECCCHHHEEECCCCCCEEEECCCCCEEEEEECCCCCCCCCEEEECCCEEEE
LNFDKFKSKLISVRYLNKLSFVKMRPYELSYQGEIYEEKLTPADWNAIDDASSKQVLEIT
ECHHHHHHHHHHHHHHHHHHEEEECCEEECCCCCHHHHCCCCCCCCCCCCCCCHHHHHHH
NVIRDRYGIEEVAWDESVAKVAYGHSVDMKKNDYFDHTSPTQGDLSKRLSKGDVKYTKAG
HHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECC
ENIAYNYVDSAAAVEGWLNSKGHRENLLDGSYTYMGAGTYRKYYTQNFIIK
CCEEEEHHHHHHHHHHHHCCCCCHHHCCCCCEEEECCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]