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The map label for this gene is yodM [H]

Identifier: 226224614

GI number: 226224614

Start: 2084102

End: 2084797

Strand: Reverse

Name: yodM [H]

Synonym: Lm4b_02029

Alternate gene names: 226224614

Gene position: 2084797-2084102 (Counterclockwise)

Preceding gene: 226224615

Following gene: 226224613

Centisome position: 71.58

GC content: 38.65

Gene sequence:

>696_bases
ATGAATACAAATCGTAAAAAAGCAACACCGTTATTCGTTATTGGCGGATTTTGCCTTATTTTATTTATTACTATCGCTTC
TGCTATCGCAACAGAAAGTAACTGGGTAGCACGTTTTGACTTAAGCTGGATTGAAAAAATCCGCGGCGGCATTCAACCGG
ATAAAACAGCCATCGTTAAATTTATGACAACCCTAGGAAGCGCAGAAACGACAATTATTTTGACTATTGTAGTCGTTCTT
ATTTTATTCTTTTTACGAAAATTTGTTGTCGGACTTTGGTTTGGTGGAACGATGCTTGTTTGTGGAGTAGTCCTAAATCT
TGTCTTGAAAAGTTTGGTTGGTCGTACGCGTCCAGCTAGCGTGAACTGGTTAGTTAGCGAGTCTGGCTTTAGTTTCCCAA
GTGGACATGCGACGGCAACGGCTGTTTTTTATGGTCTTGCAGCGATGTTCTTGATTTTCACAGTGCCAAAAATGTGGCAA
AAAATCGTTATCGGTATTATCGGTTATGGTTTTATCCTGTTTGTCATGTATACACGCGTTTATCTTGGTGTGCATTTCCC
GACGGATGTACTTGGTGGATTTTTCCTTGGTACAGCATCGGTATTTATCTCACTAGGCGTTTATTTCTTAGTACGAAAAC
CATTACATAATTTACTTGTGAAATGGCGTATTAAAGATAAAAGTATTACAGAATAA

Upstream 100 bases:

>100_bases
GAGCTTACAAATGAAGCGACAGATGAACAAGGTCAGTATCAGGCGCTTGTAAAAGAAGTAAAAGAATTTCTAAAAACAAC
CGAATGAAAAGGAGTTAACC

Downstream 100 bases:

>100_bases
TATAAAAACCCTGTTATAAGAATTAGCTTATAGCAGGGTTTTTCAGATAGTAAACTGAATACTCTATTTTGTAACCGTAC
GGCTTTTTCACTTGATTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MNTNRKKATPLFVIGGFCLILFITIASAIATESNWVARFDLSWIEKIRGGIQPDKTAIVKFMTTLGSAETTIILTIVVVL
ILFFLRKFVVGLWFGGTMLVCGVVLNLVLKSLVGRTRPASVNWLVSESGFSFPSGHATATAVFYGLAAMFLIFTVPKMWQ
KIVIGIIGYGFILFVMYTRVYLGVHFPTDVLGGFFLGTASVFISLGVYFLVRKPLHNLLVKWRIKDKSITE

Sequences:

>Translated_231_residues
MNTNRKKATPLFVIGGFCLILFITIASAIATESNWVARFDLSWIEKIRGGIQPDKTAIVKFMTTLGSAETTIILTIVVVL
ILFFLRKFVVGLWFGGTMLVCGVVLNLVLKSLVGRTRPASVNWLVSESGFSFPSGHATATAVFYGLAAMFLIFTVPKMWQ
KIVIGIIGYGFILFVMYTRVYLGVHFPTDVLGGFFLGTASVFISLGVYFLVRKPLHNLLVKWRIKDKSITE
>Mature_231_residues
MNTNRKKATPLFVIGGFCLILFITIASAIATESNWVARFDLSWIEKIRGGIQPDKTAIVKFMTTLGSAETTIILTIVVVL
ILFFLRKFVVGLWFGGTMLVCGVVLNLVLKSLVGRTRPASVNWLVSESGFSFPSGHATATAVFYGLAAMFLIFTVPKMWQ
KIVIGIIGYGFILFVMYTRVYLGVHFPTDVLGGFFLGTASVFISLGVYFLVRKPLHNLLVKWRIKDKSITE

Specific function: Unknown

COG id: COG0671

COG function: function code I; Membrane-associated phospholipid phosphatase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PA-phosphatase related phosphoesterase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016118
- InterPro:   IPR000326 [H]

Pfam domain/function: PF01569 PAP2 [H]

EC number: NA

Molecular weight: Translated: 25614; Mature: 25614

Theoretical pI: Translated: 10.71; Mature: 10.71

Prosite motif: PS00962 RIBOSOMAL_S2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTNRKKATPLFVIGGFCLILFITIASAIATESNWVARFDLSWIEKIRGGIQPDKTAIVK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHCCCCCCHHHHHH
FMTTLGSAETTIILTIVVVLILFFLRKFVVGLWFGGTMLVCGVVLNLVLKSLVGRTRPAS
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VNWLVSESGFSFPSGHATATAVFYGLAAMFLIFTVPKMWQKIVIGIIGYGFILFVMYTRV
EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLGVHFPTDVLGGFFLGTASVFISLGVYFLVRKPLHNLLVKWRIKDKSITE
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCC
>Mature Secondary Structure
MNTNRKKATPLFVIGGFCLILFITIASAIATESNWVARFDLSWIEKIRGGIQPDKTAIVK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHCCCCCCHHHHHH
FMTTLGSAETTIILTIVVVLILFFLRKFVVGLWFGGTMLVCGVVLNLVLKSLVGRTRPAS
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VNWLVSESGFSFPSGHATATAVFYGLAAMFLIFTVPKMWQKIVIGIIGYGFILFVMYTRV
EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLGVHFPTDVLGGFFLGTASVFISLGVYFLVRKPLHNLLVKWRIKDKSITE
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]