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The map label for this gene is yteP [H]

Identifier: 226224607

GI number: 226224607

Start: 2071232

End: 2072161

Strand: Reverse

Name: yteP [H]

Synonym: Lm4b_02021

Alternate gene names: 226224607

Gene position: 2072161-2071232 (Counterclockwise)

Preceding gene: 226224608

Following gene: 226224606

Centisome position: 71.14

GC content: 38.39

Gene sequence:

>930_bases
TTGAAAAAAGTTTTATCACAAATTCGAGCTAATCGGATTTGGCTTTTAATGGTACTTCCAGGCGTCCTTTGGTTCCTGGT
TTTCTCATACTTACCAATGTTTGGTACAGTGATTGCATTCAAAGATTACAAAATTGATGGGAAAGGATTTTTATCCAGTA
TTATGAGTAGCGACTGGGTGGGACTTGAAAATTTTAAATTCCTATTCCAAACAAACGACGCTTTTATTATTACCCGAAAC
ACCGTTCTTTATAATTTAGTATTTATTATTGTTGGGCTGTTTCTTGGTGTAGCACTTGCTATTATTTTCAACAGCTTACT
AAATAAGCGAGGAGCAAAAATTTATCAAACGGGAATGCTTTTCCCCCATTTTTTATCATGGGTAGTTGTCAGCTATTTCT
TGTTCAGTTTTTTGAGCGAAGACAGTGGGCTGATGAATAATATTTTACTTGCATTCGGACAGGACCCGATTTCCTGGTAT
AACGATCCGAAATACTGGCCGTTTATCCTTATCATGATGAATGTTTGGAAAGGCTTGGGTTATGGAAGTATTGTCTACCT
GGCAGCAATTGCCGGAATTGACCGGACCTACTACGAGGCGGCAATGATTGATGGCGCTGGCAAATGGCAACAAATTAGGC
ATGTAACAATTCCGGCACTAACGCCACTGATGGTTATTTTAACGATTTTGAATGTCGGGAAGATTTTTAACTCTGATTTT
GGTTTGTTTTATCAACTACCGCGAAATTCAGGACCACTTTATCCTGTGACGGATGTTATTGATACATATGTATACCGAGG
TTTAACGTCACTTGGAGATATGAGTATGAGTGCGGCAGCTGGTTTCTATCAGTCCATCGTCGGCTTTATTCTAGTGCTAC
TCACAAACTACATCGTGAAAAAAATAAATCCAGAATATGGCTTATTTTAG

Upstream 100 bases:

>100_bases
TATTTGTCTATAAATCTAAACATCCGCAACTATTTAACCCCACGTAAAAACGATAAACTAAAGATGTTGAAAGCACTTAC
AAAAAAGAGGGGTGAATGGA

Downstream 100 bases:

>100_bases
AAAAGGAGGCGAGGTGCTTTGGCAGAACAGCTTGAAGCAGTGAGTGAAATAGAACAAGTCCGAGGCGAAATGGAAAAACC
AGCAAAAAATAAACCAGCTA

Product: transport system integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MKKVLSQIRANRIWLLMVLPGVLWFLVFSYLPMFGTVIAFKDYKIDGKGFLSSIMSSDWVGLENFKFLFQTNDAFIITRN
TVLYNLVFIIVGLFLGVALAIIFNSLLNKRGAKIYQTGMLFPHFLSWVVVSYFLFSFLSEDSGLMNNILLAFGQDPISWY
NDPKYWPFILIMMNVWKGLGYGSIVYLAAIAGIDRTYYEAAMIDGAGKWQQIRHVTIPALTPLMVILTILNVGKIFNSDF
GLFYQLPRNSGPLYPVTDVIDTYVYRGLTSLGDMSMSAAAGFYQSIVGFILVLLTNYIVKKINPEYGLF

Sequences:

>Translated_309_residues
MKKVLSQIRANRIWLLMVLPGVLWFLVFSYLPMFGTVIAFKDYKIDGKGFLSSIMSSDWVGLENFKFLFQTNDAFIITRN
TVLYNLVFIIVGLFLGVALAIIFNSLLNKRGAKIYQTGMLFPHFLSWVVVSYFLFSFLSEDSGLMNNILLAFGQDPISWY
NDPKYWPFILIMMNVWKGLGYGSIVYLAAIAGIDRTYYEAAMIDGAGKWQQIRHVTIPALTPLMVILTILNVGKIFNSDF
GLFYQLPRNSGPLYPVTDVIDTYVYRGLTSLGDMSMSAAAGFYQSIVGFILVLLTNYIVKKINPEYGLF
>Mature_309_residues
MKKVLSQIRANRIWLLMVLPGVLWFLVFSYLPMFGTVIAFKDYKIDGKGFLSSIMSSDWVGLENFKFLFQTNDAFIITRN
TVLYNLVFIIVGLFLGVALAIIFNSLLNKRGAKIYQTGMLFPHFLSWVVVSYFLFSFLSEDSGLMNNILLAFGQDPISWY
NDPKYWPFILIMMNVWKGLGYGSIVYLAAIAGIDRTYYEAAMIDGAGKWQQIRHVTIPALTPLMVILTILNVGKIFNSDF
GLFYQLPRNSGPLYPVTDVIDTYVYRGLTSLGDMSMSAAAGFYQSIVGFILVLLTNYIVKKINPEYGLF

Specific function: Part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane. May play a role in the degradation of type I rhamnogalacturonan derived from plant cell walls [H]

COG id: COG4209

COG function: function code G; ABC-type polysaccharide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=300, Percent_Identity=27, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1787570, Length=256, Percent_Identity=25, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1790465, Length=199, Percent_Identity=28.643216080402, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 35037; Mature: 35037

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVLSQIRANRIWLLMVLPGVLWFLVFSYLPMFGTVIAFKDYKIDGKGFLSSIMSSDWV
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCEECHHHHHHHHHHCCCC
GLENFKFLFQTNDAFIITRNTVLYNLVFIIVGLFLGVALAIIFNSLLNKRGAKIYQTGML
CHHHEEEEEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCH
FPHFLSWVVVSYFLFSFLSEDSGLMNNILLAFGQDPISWYNDPKYWPFILIMMNVWKGLG
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCC
YGSIVYLAAIAGIDRTYYEAAMIDGAGKWQQIRHVTIPALTPLMVILTILNVGKIFNSDF
CHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GLFYQLPRNSGPLYPVTDVIDTYVYRGLTSLGDMSMSAAAGFYQSIVGFILVLLTNYIVK
CEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KINPEYGLF
HCCCCCCCC
>Mature Secondary Structure
MKKVLSQIRANRIWLLMVLPGVLWFLVFSYLPMFGTVIAFKDYKIDGKGFLSSIMSSDWV
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCEECHHHHHHHHHHCCCC
GLENFKFLFQTNDAFIITRNTVLYNLVFIIVGLFLGVALAIIFNSLLNKRGAKIYQTGML
CHHHEEEEEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCH
FPHFLSWVVVSYFLFSFLSEDSGLMNNILLAFGQDPISWYNDPKYWPFILIMMNVWKGLG
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCC
YGSIVYLAAIAGIDRTYYEAAMIDGAGKWQQIRHVTIPALTPLMVILTILNVGKIFNSDF
CHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GLFYQLPRNSGPLYPVTDVIDTYVYRGLTSLGDMSMSAAAGFYQSIVGFILVLLTNYIVK
CEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KINPEYGLF
HCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]