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The map label for this gene is yloC [H]

Identifier: 226224431

GI number: 226224431

Start: 1889376

End: 1890251

Strand: Reverse

Name: yloC [H]

Synonym: Lm4b_01844

Alternate gene names: 226224431

Gene position: 1890251-1889376 (Counterclockwise)

Preceding gene: 226224434

Following gene: 226224430

Centisome position: 64.9

GC content: 38.13

Gene sequence:

>876_bases
ATGGTGAAAAGCATGACGGGATTTGGGCGTGCGACGAAAGAATTTGAAGCGTTCAAAGTAACCATTGAATTAAAAGCAGT
CAACCACCGCTACTCCGAATTTCTTTTTCGGATGCCAAAACAACTTGCTTATTTAGAAGGAAAATTAAAAAAAATCATAA
GTAAGCAAATCAAACGTGGTAGAATCGAAGTTTTCTTTTCCATCACGGGAGAGCAAATCACAAAACGCGAACTACATATT
GACTGGGACCTCGCAGATAGCTATTACCGTTTTATTAAACAAGCAAGCGCTAGATATGAATTACAAGAATTACCAACTAT
GGCTGATTTACTGCAAGAACAAGCCTATCTTTCTATTGAGGAAGAAATGGAAGCAAGTAGCGAACTAGAGCGATTAGTTT
TAGAAACACTTGCCCGCGCAACTGAGCGACTGGATGAGATGAGAAGTATGGAAGGAGCAGAATTACTGCTTTATTTCAAA
CAACATCTTACCGCATTGGAGAAAAGTTTGGAGATCATTCAAGCTGAAATTCCAAATACAGAAAAACATTACCAAGAAAA
AATTGAAACACGTTTACAAAACGTTGTAGGCGACCAATTTGATCCAAGTATCGTTCTTACCGAAGTCGCAATGCTACTTG
AAAAGGCAGATATTAACGAAGAAGTCGAACGAACAAAGAGTCATTTAAAGCAATTTTATGGTATTATTTTACTCGAAGAA
CCAATTGGGCGGAAGCTGGATTTTCTGATTCAAGAGATGAACCGCGAAGTCAACACGATTGGCTCCAAAGCAAGTTCTCT
AAAAATCACTGAACAAGTGGTAGAAATGAAAACGACGCTTGAAAAAATTCGAGAACAAGTGCAAAATGTGGAATGA

Upstream 100 bases:

>100_bases
ATGTATTGTATGCAAGGAGTAGCTTTGGTATAATAAGAAGTCAGAACAAATTTCAAGTAATCTTAGAGGGAACTTTAAGT
TATGAAAGGTGTCTTGCCAA

Downstream 100 bases:

>100_bases
TATGCAGGAGGGGAAATGATGACAGAAAGAGGACTGTTAATTGTACTTTCAGGTCCATCTGGAGTAGGTAAGGGAACTGT
TCGGGAAGCTGTTTTTAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MVKSMTGFGRATKEFEAFKVTIELKAVNHRYSEFLFRMPKQLAYLEGKLKKIISKQIKRGRIEVFFSITGEQITKRELHI
DWDLADSYYRFIKQASARYELQELPTMADLLQEQAYLSIEEEMEASSELERLVLETLARATERLDEMRSMEGAELLLYFK
QHLTALEKSLEIIQAEIPNTEKHYQEKIETRLQNVVGDQFDPSIVLTEVAMLLEKADINEEVERTKSHLKQFYGIILLEE
PIGRKLDFLIQEMNREVNTIGSKASSLKITEQVVEMKTTLEKIREQVQNVE

Sequences:

>Translated_291_residues
MVKSMTGFGRATKEFEAFKVTIELKAVNHRYSEFLFRMPKQLAYLEGKLKKIISKQIKRGRIEVFFSITGEQITKRELHI
DWDLADSYYRFIKQASARYELQELPTMADLLQEQAYLSIEEEMEASSELERLVLETLARATERLDEMRSMEGAELLLYFK
QHLTALEKSLEIIQAEIPNTEKHYQEKIETRLQNVVGDQFDPSIVLTEVAMLLEKADINEEVERTKSHLKQFYGIILLEE
PIGRKLDFLIQEMNREVNTIGSKASSLKITEQVVEMKTTLEKIREQVQNVE
>Mature_291_residues
MVKSMTGFGRATKEFEAFKVTIELKAVNHRYSEFLFRMPKQLAYLEGKLKKIISKQIKRGRIEVFFSITGEQITKRELHI
DWDLADSYYRFIKQASARYELQELPTMADLLQEQAYLSIEEEMEASSELERLVLETLARATERLDEMRSMEGAELLLYFK
QHLTALEKSLEIIQAEIPNTEKHYQEKIETRLQNVVGDQFDPSIVLTEVAMLLEKADINEEVERTKSHLKQFYGIILLEE
PIGRKLDFLIQEMNREVNTIGSKASSLKITEQVVEMKTTLEKIREQVQNVE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=304, Percent_Identity=29.9342105263158, Blast_Score=122, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 33989; Mature: 33989

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKSMTGFGRATKEFEAFKVTIELKAVNHRYSEFLFRMPKQLAYLEGKLKKIISKQIKRG
CCCCCCCCCCHHHHHHHEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RIEVFFSITGEQITKRELHIDWDLADSYYRFIKQASARYELQELPTMADLLQEQAYLSIE
CEEEEEEECCCHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
EEMEASSELERLVLETLARATERLDEMRSMEGAELLLYFKQHLTALEKSLEIIQAEIPNT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EKHYQEKIETRLQNVVGDQFDPSIVLTEVAMLLEKADINEEVERTKSHLKQFYGIILLEE
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCEEEECC
PIGRKLDFLIQEMNREVNTIGSKASSLKITEQVVEMKTTLEKIREQVQNVE
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVKSMTGFGRATKEFEAFKVTIELKAVNHRYSEFLFRMPKQLAYLEGKLKKIISKQIKRG
CCCCCCCCCCHHHHHHHEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RIEVFFSITGEQITKRELHIDWDLADSYYRFIKQASARYELQELPTMADLLQEQAYLSIE
CEEEEEEECCCHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
EEMEASSELERLVLETLARATERLDEMRSMEGAELLLYFKQHLTALEKSLEIIQAEIPNT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EKHYQEKIETRLQNVVGDQFDPSIVLTEVAMLLEKADINEEVERTKSHLKQFYGIILLEE
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCEEEECC
PIGRKLDFLIQEMNREVNTIGSKASSLKITEQVVEMKTTLEKIREQVQNVE
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]