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The map label for this gene is cbiC

Identifier: 226223793

GI number: 226223793

Start: 1199816

End: 1200448

Strand: Direct

Name: cbiC

Synonym: Lm4b_01197

Alternate gene names: 226223793

Gene position: 1199816-1200448 (Clockwise)

Preceding gene: 226223792

Following gene: 226223794

Centisome position: 41.19

GC content: 38.55

Gene sequence:

>633_bases
ATGAACTATATTAAGAATCCAGCCAAAATTGAAGAGAAAAGCTTTGAAATTATTCAACAAATTATTAATGATATTCGTCC
AGATTACACATTTCAAAACAAGTTAGAGGAAGCGATTATCAAGCGTGCAATACATACGACGGCAGATTTTGATTACTTAG
ATAGCCTCGTTTTTCAACAAGATGCCATCGCGAAAATCATTCATGTTCTTCAAAATAAAGGAACTATTTTCACGGATACG
AATATGGCACTTAGTGGAATTAATAAACGACTTTTAGATGAACTTGGGTGTAAATATCATTGTTATGTGAGTGACCCAGA
GACGATGGAGATTGCCAAACAGCATGGGATTACACGCTCTATGGCTGGAATTAAACTCGCTTCTTTAAAAGATGGACCGA
AACTATTTGTCCTCGGAAATGCGCCAACTGCGGTGTATAAAATTATCGAGATGACAGAAAGTGGGGAATTGCAAGCAGAT
GCAGTAGTGGCAGTACCGGTTGGTTTTGTCGGAGCGGCTGAATGTAAAGAGGAAATTTTAGAAACAGATATCCCAGCCAT
TGTCGCACGCGGTAGAAAAGGCGGTAGTAATCTTGCTGCAGCTATCATTAATGCAATCTTGATTACGATGTAA

Upstream 100 bases:

>100_bases
AGAAATTAGCCAAACGATTCATTTGCTATATACGGCTTCAACGATCGCTTTTATCATTTTTGCAAGTATTTATCTACTAT
TATTTTAAAGGAGTGGCAAG

Downstream 100 bases:

>100_bases
AGAAGGCGACGAGTAATGGAAGATTTTATTTATTATAACGGCAAAAAATACCGTAAAGGCTATACGACTGGTACGTGTGC
GGCTGCTGCTGCTAAAGCTT

Product: cobalt-precorrin-8X methylmutase

Products: hydrogenobyrinate

Alternate protein names: Cobalt-precorrin isomerase; HBA synthase [H]

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MNYIKNPAKIEEKSFEIIQQIINDIRPDYTFQNKLEEAIIKRAIHTTADFDYLDSLVFQQDAIAKIIHVLQNKGTIFTDT
NMALSGINKRLLDELGCKYHCYVSDPETMEIAKQHGITRSMAGIKLASLKDGPKLFVLGNAPTAVYKIIEMTESGELQAD
AVVAVPVGFVGAAECKEEILETDIPAIVARGRKGGSNLAAAIINAILITM

Sequences:

>Translated_210_residues
MNYIKNPAKIEEKSFEIIQQIINDIRPDYTFQNKLEEAIIKRAIHTTADFDYLDSLVFQQDAIAKIIHVLQNKGTIFTDT
NMALSGINKRLLDELGCKYHCYVSDPETMEIAKQHGITRSMAGIKLASLKDGPKLFVLGNAPTAVYKIIEMTESGELQAD
AVVAVPVGFVGAAECKEEILETDIPAIVARGRKGGSNLAAAIINAILITM
>Mature_210_residues
MNYIKNPAKIEEKSFEIIQQIINDIRPDYTFQNKLEEAIIKRAIHTTADFDYLDSLVFQQDAIAKIIHVLQNKGTIFTDT
NMALSGINKRLLDELGCKYHCYVSDPETMEIAKQHGITRSMAGIKLASLKDGPKLFVLGNAPTAVYKIIEMTESGELQAD
AVVAVPVGFVGAAECKEEILETDIPAIVARGRKGGSNLAAAIINAILITM

Specific function: Catalyzes the conversion of cobalt-precorrin-8X to cobyrinic acid; a methyl migration reaction during the transformation of cobalt-precorrin-3 to form cobyrinic acid [H]

COG id: COG2082

COG function: function code H; Precorrin isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CobH family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003722 [H]

Pfam domain/function: PF02570 CbiC [H]

EC number: 5.4.1.2

Molecular weight: Translated: 23067; Mature: 23067

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYIKNPAKIEEKSFEIIQQIINDIRPDYTFQNKLEEAIIKRAIHTTADFDYLDSLVFQQ
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
DAIAKIIHVLQNKGTIFTDTNMALSGINKRLLDELGCKYHCYVSDPETMEIAKQHGITRS
HHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHCCCHHH
MAGIKLASLKDGPKLFVLGNAPTAVYKIIEMTESGELQADAVVAVPVGFVGAAECKEEIL
HHCEEEECCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHH
ETDIPAIVARGRKGGSNLAAAIINAILITM
HCCCHHHHHCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNYIKNPAKIEEKSFEIIQQIINDIRPDYTFQNKLEEAIIKRAIHTTADFDYLDSLVFQQ
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
DAIAKIIHVLQNKGTIFTDTNMALSGINKRLLDELGCKYHCYVSDPETMEIAKQHGITRS
HHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHCCCHHH
MAGIKLASLKDGPKLFVLGNAPTAVYKIIEMTESGELQADAVVAVPVGFVGAAECKEEIL
HHCEEEECCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHH
ETDIPAIVARGRKGGSNLAAAIINAILITM
HCCCHHHHHCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Precorrin 8X

Specific reaction: precorrin-8X = hydrogenobyrinate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8501034; 11677609; 1451790 [H]