Click here to switch to the map view.

The map label for this gene is 226223744

Identifier: 226223744

GI number: 226223744

Start: 1157949

End: 1158503

Strand: Direct

Name: 226223744

Synonym: Lm4b_01148

Alternate gene names: NA

Gene position: 1157949-1158503 (Clockwise)

Preceding gene: 226223743

Following gene: 226223745

Centisome position: 39.76

GC content: 40.54

Gene sequence:

>555_bases
ATGAAAATGGATACATTAGGATTTCTCGAATTAAATAGTATTTCGAAAGGCATCGAGGCGGTTGACACAATGCTAAAAGC
GGCCAACTCCGAATTGATTTATGCTAAAGCAAGCTGCCCTGGGAAGTATTATATATTAATTGCAGGGACAGTAGATTCTG
TAGCTCAATCAATTGAAGCTGGAACGAAGATTGGTGCGGCAAATATCGTCGGGAATTTAGTCATTCCTCGCGTGTCCGAC
CAAGTAATTAAAGCAATTAACAAAACGGAAGTGCCAGATGAGATGAATGCAGTTGGTGTTATGGAGTATTATTCCTGTTC
AGGATCAATTATTGCTGCAGATGCCGCAGTAAAAGCTGCAGATGTTCAGTTAATGGATATTCGGTTGGCAACGGGGATTG
CTGGTAAATCTTTCGTTGTTCTAACTGGTGATACAGCAGCATGTGAAGCGGCTGTGGAAGCTGGACTTGCGGCAGCCAAA
GAAGAAGCACTTTTAATTAATAAAGTAGTTATACCAAGACCTCGTAAAGAAGTTTTTGAGAGTTTAATCTATTAA

Upstream 100 bases:

>100_bases
AAATTCCTGATGCTGCTCTTGGGGCAAATATCCATGCAAGTATTGACGGTCAAATTATTCGTATAACCGAAGAACAAGTT
CATATTAAGAAGGTGATGTC

Downstream 100 bases:

>100_bases
AAAGATAACAATATATTGTCATAGAGTTTTTGAGAAAGGTACGCACTGACTGTGGTTGCGTGCCTTTTGAACAATCTGAC
AAAATAGTGGCGCTTAAATA

Product: PduT protein

Products: NA

Alternate protein names: BMC Domain Protein; Propanediol Utilization Protein; Propanediol Utilization Protein PduT; Propanediol Utilization Protein Polyhedral Bodies; Propanediol Utilization Polyhedral Bodies PduT; Propanediol Utilization Polyhedral Body Protein PduT; PduT Protein; Ethanolamine/Propanediol Utilization Protein; Ethanolamine Utilization Protein; Microcompartment Shellprotein; Propanediol Utilization Polyhedral Bodies; Ethanolamine Utilization Protein EutM; Propanediol Utilization Protein-Like

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MKMDTLGFLELNSISKGIEAVDTMLKAANSELIYAKASCPGKYYILIAGTVDSVAQSIEAGTKIGAANIVGNLVIPRVSD
QVIKAINKTEVPDEMNAVGVMEYYSCSGSIIAADAAVKAADVQLMDIRLATGIAGKSFVVLTGDTAACEAAVEAGLAAAK
EEALLINKVVIPRPRKEVFESLIY

Sequences:

>Translated_184_residues
MKMDTLGFLELNSISKGIEAVDTMLKAANSELIYAKASCPGKYYILIAGTVDSVAQSIEAGTKIGAANIVGNLVIPRVSD
QVIKAINKTEVPDEMNAVGVMEYYSCSGSIIAADAAVKAADVQLMDIRLATGIAGKSFVVLTGDTAACEAAVEAGLAAAK
EEALLINKVVIPRPRKEVFESLIY
>Mature_184_residues
MKMDTLGFLELNSISKGIEAVDTMLKAANSELIYAKASCPGKYYILIAGTVDSVAQSIEAGTKIGAANIVGNLVIPRVSD
QVIKAINKTEVPDEMNAVGVMEYYSCSGSIIAADAAVKAADVQLMDIRLATGIAGKSFVVLTGDTAACEAAVEAGLAAAK
EEALLINKVVIPRPRKEVFESLIY

Specific function: Unknown

COG id: COG4577

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19272; Mature: 19272

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMDTLGFLELNSISKGIEAVDTMLKAANSELIYAKASCPGKYYILIAGTVDSVAQSIEA
CCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEECCHHHHHHHHHH
GTKIGAANIVGNLVIPRVSDQVIKAINKTEVPDEMNAVGVMEYYSCSGSIIAADAAVKAA
CCCCCHHHHHHCEECCCCHHHHHHHHCCCCCCCCCCCEEHHHEECCCCCEEEECCHHHHC
DVQLMDIRLATGIAGKSFVVLTGDTAACEAAVEAGLAAAKEEALLINKVVIPRPRKEVFE
CEEEEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHH
SLIY
HHCC
>Mature Secondary Structure
MKMDTLGFLELNSISKGIEAVDTMLKAANSELIYAKASCPGKYYILIAGTVDSVAQSIEA
CCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEECCHHHHHHHHHH
GTKIGAANIVGNLVIPRVSDQVIKAINKTEVPDEMNAVGVMEYYSCSGSIIAADAAVKAA
CCCCCHHHHHHCEECCCCHHHHHHHHCCCCCCCCCCCEEHHHEECCCCCEEEECCHHHHC
DVQLMDIRLATGIAGKSFVVLTGDTAACEAAVEAGLAAAKEEALLINKVVIPRPRKEVFE
CEEEEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHH
SLIY
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA