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The map label for this gene is pduU [H]

Identifier: 226223745

GI number: 226223745

Start: 1158651

End: 1159001

Strand: Direct

Name: pduU [H]

Synonym: Lm4b_01149

Alternate gene names: 226223745

Gene position: 1158651-1159001 (Clockwise)

Preceding gene: 226223744

Following gene: 226223746

Centisome position: 39.78

GC content: 38.46

Gene sequence:

>351_bases
ATGAGTTTTGATGATAATAAAGAGCGTGTAATACAAGAATATGTACCGGGAAAACAGGTGACGCTGGCGCATTTAATCGC
CAACCCAAACCGTGATATTTATACAAAATTAGGATTAGAAGAAGGCGCAAGTGCGATTGGAATTTTAACGATTACGCCAA
GTGAGGCTTCCATTATTGCGAGTGACATTGCAACTAAATCAGGTGACGTACGAATTGGCTTTATTGATCGTTTTAGTGGG
TCCGTTGTACTTACAGGTGATGTTTCTTCTGTTGAATCAGCTTTACAACAAGTCGTTTATTCATTACATGAGATTTTGGA
CTTTTCTATTCCAAAAATCACTAGGAGCTGA

Upstream 100 bases:

>100_bases
GACTGTGGTTGCGTGCCTTTTGAACAATCTGACAAAATAGTGGCGCTTAAATATGATAGGATTATTTTGAGATAGTTTGT
CTAGATGAGGAGTGAAGAAA

Downstream 100 bases:

>100_bases
GTCACTTGAAGAAAATGATGGTAATGGGTTCAGTTGGTTGTGGTAAAACAACGCTGTGCCAGAAATTACATGGATATGAT
ATTTTATATAAAAAAACACA

Product: PduU protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MSFDDNKERVIQEYVPGKQVTLAHLIANPNRDIYTKLGLEEGASAIGILTITPSEASIIASDIATKSGDVRIGFIDRFSG
SVVLTGDVSSVESALQQVVYSLHEILDFSIPKITRS

Sequences:

>Translated_116_residues
MSFDDNKERVIQEYVPGKQVTLAHLIANPNRDIYTKLGLEEGASAIGILTITPSEASIIASDIATKSGDVRIGFIDRFSG
SVVLTGDVSSVESALQQVVYSLHEILDFSIPKITRS
>Mature_115_residues
SFDDNKERVIQEYVPGKQVTLAHLIANPNRDIYTKLGLEEGASAIGILTITPSEASIIASDIATKSGDVRIGFIDRFSGS
VVLTGDVSSVESALQQVVYSLHEILDFSIPKITRS

Specific function: May Be Involved In The Formation Of A Specific Microcompartiment In The Cell In Which The Metabolism Of Potentially Toxic By-Products Takes Place. [C]

COG id: COG4810

COG function: function code E; Ethanolamine utilization protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EutS/PduU family [H]

Homologues:

Organism=Escherichia coli, GI87082109, Length=111, Percent_Identity=53.1531531531532, Blast_Score=129, Evalue=7e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009307
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 12537; Mature: 12406

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFDDNKERVIQEYVPGKQVTLAHLIANPNRDIYTKLGLEEGASAIGILTITPSEASIIA
CCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCCCCCCCEEEEEEECCCCCHHHH
SDIATKSGDVRIGFIDRFSGSVVLTGDVSSVESALQQVVYSLHEILDFSIPKITRS
HHHCCCCCCEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SFDDNKERVIQEYVPGKQVTLAHLIANPNRDIYTKLGLEEGASAIGILTITPSEASIIA
CCCCHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCCCCCCCEEEEEEECCCCCHHHH
SDIATKSGDVRIGFIDRFSGSVVLTGDVSSVESALQQVVYSLHEILDFSIPKITRS
HHHCCCCCCEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]