| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is ggaA [H]
Identifier: 226223699
GI number: 226223699
Start: 1116876
End: 1118255
Strand: Direct
Name: ggaA [H]
Synonym: Lm4b_01101
Alternate gene names: 226223699
Gene position: 1116876-1118255 (Clockwise)
Preceding gene: 226223698
Following gene: 226223700
Centisome position: 38.35
GC content: 36.3
Gene sequence:
>1380_bases ATGAAATTTGCTATTATAATGCCTTTTTACAATGCCGAAAAAAGGTTAGCACTATCCATAGATAGTATAATTAAGCAGTC TTACAGCTTTTTGAAGCATGTGGAAGTACTGCTTATTAATGATGGAAGCACGGATGGAAGTGGCGCTATCGCAAATCGTT ACGCTACAAAATATCCTAACAATATTCGCGTGTTGACCGTTCCAAATGGTGGACCGGCAAAAGCGCGTAATATCGGAATA CATAATGTAAGTGAAGATACTGATTTTGTTGGTTTTTTAGACGCCGATGATATAATGTCAGAGAATATGTTAGCGAGTAT AGTTACATTTCTAAATGAGTCTAACGTTTCTATGCTTGTGCCAGCTTTTTATTACTTAGATGATTTTGGAAGTAAGAAAA AAATTTCACCACATAAATTAAATTACCGTTTTGCGAATGGAAATCGAGTTGCTGATATTGAAAAAGAACCGGAAGCAATT CATTTTTATATTGGCGGTACTTTTTTACGTTATGATTGTTTGAAAGAATTTACTTTTGATGAGTCGCTTTATTTTGCGGA GGATCAGTTATTAATTACCCAGTTCTTACTGAAATATCGGAGCTATGGCTTGATTGCGGATGCGGGGTATTATTACTATC GTGATCTAAAGCAAAAAGGTTCTTTAGTAAGTTCGTCTTGGAAAAAACCAGAACGATACACGCCTTTTTTGCAGAAAGTA TATCAAACCTATTTAACTGACTCGAAAGAAATATATGGCAAAGTGATTCCCTATGTGAAGTATCTAATTGCGTACCATGC AAAATTGTTTTTTTATAAAGAAAATACTTATTTCCGGGAAGTTTTAAGCGAGTCGGAGCAAGCGATTTTCGTGCAAGAAT TACAAAAGATTTTGCAGGAAGTCGGAGCAAGTACGATTATGGAATTAGACACACCTCTCGTAGTAAAAGAAATGATGTGC TCGATTTTGCAAAATGGATGGCCGCTGCAATTTGAAACGGCTGAAAAACAAGATATTCCACTTGTGACAGTAAAAGAAAA TTATCGTATCGGCAAAACAGTCGCGATTGAATTACTTCTAGAAGAAGCGGATATTCATGACGTGAAATGGGTTGCTCGCA CGTCTTTTAAAGAAATGCCAGCTCGGTTAGTCAAACGAAAAGAGAATCAAACTATTTGGGATGTCGTTGTCAGAGAAAAA GGCACAGTAGAAAAAGCTGTATTTAAATTAAAACCGTATCAAACGAAAGCGCGTCTTTTTTATCAAGATGAGGAAAAGGA TACGCCTATCGCCGACATAAATATCATAAGTAGCATCTTAGGGAAATTAAAACGAAATCGAGCGTTAAAGCGAAAGTTTA AACAGGGGGGAGTATCCTGA
Upstream 100 bases:
>100_bases TGCTAAAGTATTTTAGGAAGCAAGAAAATCGAATGTAAGTATTCGATGGTCATTTGCTAAATCCTTAACTTCCCAGCTTT TATATGGAGAGGGAAAAAGA
Downstream 100 bases:
>100_bases TGAAGTTAGTACAAAAAGTGTATTATTTGTTGTTTAGATTAGTGGGATTTTTACCGCGAAAAAAAGATTTAGTGATATTT GAAAGCTTTTCAGGTAAGCA
Product: galactosamine-containing minor teichoic acid biosynthesis protein GgaA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 459; Mature: 459
Protein sequence:
>459_residues MKFAIIMPFYNAEKRLALSIDSIIKQSYSFLKHVEVLLINDGSTDGSGAIANRYATKYPNNIRVLTVPNGGPAKARNIGI HNVSEDTDFVGFLDADDIMSENMLASIVTFLNESNVSMLVPAFYYLDDFGSKKKISPHKLNYRFANGNRVADIEKEPEAI HFYIGGTFLRYDCLKEFTFDESLYFAEDQLLITQFLLKYRSYGLIADAGYYYYRDLKQKGSLVSSSWKKPERYTPFLQKV YQTYLTDSKEIYGKVIPYVKYLIAYHAKLFFYKENTYFREVLSESEQAIFVQELQKILQEVGASTIMELDTPLVVKEMMC SILQNGWPLQFETAEKQDIPLVTVKENYRIGKTVAIELLLEEADIHDVKWVARTSFKEMPARLVKRKENQTIWDVVVREK GTVEKAVFKLKPYQTKARLFYQDEEKDTPIADINIISSILGKLKRNRALKRKFKQGGVS
Sequences:
>Translated_459_residues MKFAIIMPFYNAEKRLALSIDSIIKQSYSFLKHVEVLLINDGSTDGSGAIANRYATKYPNNIRVLTVPNGGPAKARNIGI HNVSEDTDFVGFLDADDIMSENMLASIVTFLNESNVSMLVPAFYYLDDFGSKKKISPHKLNYRFANGNRVADIEKEPEAI HFYIGGTFLRYDCLKEFTFDESLYFAEDQLLITQFLLKYRSYGLIADAGYYYYRDLKQKGSLVSSSWKKPERYTPFLQKV YQTYLTDSKEIYGKVIPYVKYLIAYHAKLFFYKENTYFREVLSESEQAIFVQELQKILQEVGASTIMELDTPLVVKEMMC SILQNGWPLQFETAEKQDIPLVTVKENYRIGKTVAIELLLEEADIHDVKWVARTSFKEMPARLVKRKENQTIWDVVVREK GTVEKAVFKLKPYQTKARLFYQDEEKDTPIADINIISSILGKLKRNRALKRKFKQGGVS >Mature_459_residues MKFAIIMPFYNAEKRLALSIDSIIKQSYSFLKHVEVLLINDGSTDGSGAIANRYATKYPNNIRVLTVPNGGPAKARNIGI HNVSEDTDFVGFLDADDIMSENMLASIVTFLNESNVSMLVPAFYYLDDFGSKKKISPHKLNYRFANGNRVADIEKEPEAI HFYIGGTFLRYDCLKEFTFDESLYFAEDQLLITQFLLKYRSYGLIADAGYYYYRDLKQKGSLVSSSWKKPERYTPFLQKV YQTYLTDSKEIYGKVIPYVKYLIAYHAKLFFYKENTYFREVLSESEQAIFVQELQKILQEVGASTIMELDTPLVVKEMMC SILQNGWPLQFETAEKQDIPLVTVKENYRIGKTVAIELLLEEADIHDVKWVARTSFKEMPARLVKRKENQTIWDVVVREK GTVEKAVFKLKPYQTKARLFYQDEEKDTPIADINIISSILGKLKRNRALKRKFKQGGVS
Specific function: Involved in the biosynthesis of galactosamine-containing minor teichoic acid, a non-essential cell wall polymer in B.subtilis 168 [H]
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
Organism=Escherichia coli, GI1790044, Length=117, Percent_Identity=36.7521367521368, Blast_Score=76, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 52959; Mature: 52959
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFAIIMPFYNAEKRLALSIDSIIKQSYSFLKHVEVLLINDGSTDGSGAIANRYATKYPN CCEEEEEECCCCCCCEEHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCHHHHHHHCCCC NIRVLTVPNGGPAKARNIGIHNVSEDTDFVGFLDADDIMSENMLASIVTFLNESNVSMLV CEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCEEEH PAFYYLDDFGSKKKISPHKLNYRFANGNRVADIEKEPEAIHFYIGGTFLRYDCLKEFTFD HHHHHHHCCCCCCCCCCCEEEEEECCCCEEECCCCCCCEEEEEECCHHHHHHHHHHCCCC ESLYFAEDQLLITQFLLKYRSYGLIADAGYYYYRDLKQKGSLVSSSWKKPERYTPFLQKV CCEEECCHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHH YQTYLTDSKEIYGKVIPYVKYLIAYHAKLFFYKENTYFREVLSESEQAIFVQELQKILQE HHHHCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHCCCHHHHHHHHHHHHHHH VGASTIMELDTPLVVKEMMCSILQNGWPLQFETAEKQDIPLVTVKENYRIGKTVAIELLL HCCHHHHHCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCCHHEEEEEHH EEADIHDVKWVARTSFKEMPARLVKRKENQTIWDVVVREKGTVEKAVFKLKPYQTKARLF HHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHCCCCCCHHHHHHCCCCCCCCEEEE YQDEEKDTPIADINIISSILGKLKRNRALKRKFKQGGVS ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKFAIIMPFYNAEKRLALSIDSIIKQSYSFLKHVEVLLINDGSTDGSGAIANRYATKYPN CCEEEEEECCCCCCCEEHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCHHHHHHHCCCC NIRVLTVPNGGPAKARNIGIHNVSEDTDFVGFLDADDIMSENMLASIVTFLNESNVSMLV CEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCEEEH PAFYYLDDFGSKKKISPHKLNYRFANGNRVADIEKEPEAIHFYIGGTFLRYDCLKEFTFD HHHHHHHCCCCCCCCCCCEEEEEECCCCEEECCCCCCCEEEEEECCHHHHHHHHHHCCCC ESLYFAEDQLLITQFLLKYRSYGLIADAGYYYYRDLKQKGSLVSSSWKKPERYTPFLQKV CCEEECCHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHH YQTYLTDSKEIYGKVIPYVKYLIAYHAKLFFYKENTYFREVLSESEQAIFVQELQKILQE HHHHCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHCCCHHHHHHHHHHHHHHH VGASTIMELDTPLVVKEMMCSILQNGWPLQFETAEKQDIPLVTVKENYRIGKTVAIELLL HCCHHHHHCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCCHHEEEEEHH EEADIHDVKWVARTSFKEMPARLVKRKENQTIWDVVVREKGTVEKAVFKLKPYQTKARLF HHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHCCCCCCHHHHHHCCCCCCCCEEEE YQDEEKDTPIADINIISSILGKLKRNRALKRKFKQGGVS ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]