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The map label for this gene is yycB [H]

Identifier: 226223565

GI number: 226223565

Start: 982795

End: 984012

Strand: Reverse

Name: yycB [H]

Synonym: Lm4b_00967

Alternate gene names: 226223565

Gene position: 984012-982795 (Counterclockwise)

Preceding gene: 226223566

Following gene: 226223560

Centisome position: 33.78

GC content: 38.59

Gene sequence:

>1218_bases
ATGAATTCAGATTTAACCAATAAAAAAATCCTTACACGCTCGAGTAAGGTAATGCTTGTTTTAGGAATTATTTTAATTGC
GGCAAACTTACGGACACCAATTACCTCTGTAGGTCCGTTACTTGGAATGATTCAATCAGATTTACATTTAACCAATACGA
TGGCTGGATTACTTACAACAATTCCGCTACTTGCATTTGCAGGACTATCCCCGTTCGTTTCTAAGCTAAGTCGAGCACTT
GGTATAGAGGTATTAATTTTTGTAGCACTATTGACACTTGTACTTGGTAGCTTACTTCGACCTTTTGGTGGCGAACTCAA
TTTATTTGCTGGAACGTTTATGATTGGTCTTGCTATTGCTGTCGGAAATGTTATTTTGCCAAGTTTGATAAAAAAAGAAT
TTCCATTTAAATTGGGTCTAATGACTGGAGTTTATTCCATTTCGATGAATTTGTGTGCAGCGATTGCAGCTGGCTTAACG
GTTCCAATTGCTATGAACAATCGCTTTAGCTGGCATGGAAGTATGGTTTTCTGGGCAATTCTTGGAATCGTTGCTTTAGT
CATTTGGCTTCCACAGTTAAAATATAATCAACGCTCGACGGAAAAAATTGCAACTCACTTGGTTACAACTTCGGTTTGGA
AGTCTCCGCTTGCGTGGAAAATTTCTTTATTTATGGGTTCGCAGTCAGCAATTTTTTATATTTCGATTGCCTGGTTACCA
AATATTTTGGCGGACCAAGGATTATCTAGTACTTCTAGTGGCTTAATGCTCTCCTTAATGCAGTTTGCGGTTATGCCGAT
TACGTTTATTATTCCTATTGTTGCCGGACGAATGAAAAATCAGCAATTACTAGTTGGAATTTCTATTTTATTCTTTTTAA
TTGGGATTTTTGGCATTATGTTTGCTTCTGGTAGCGTGCTTATTTTATCGATTGCTATCATTGTATACGGAATTGGTTCG
GGGATGTCATTTAGTTTGTCGATGATGTTCTTTAATTTGCGAACAACAAGCGCTACCGAATCAGCGGATCTCTCTGGAAT
GGCGCAATCTATCGGTTACTTGTTTGCCGCTTCAGGTCCGATATTATTTGGTACCCTGCATGATGCGCTTGGTAGCTGGC
AACCAACCTTATATGTTTTAGTCGGTATTACCATGCTTATGTTATACTGCGGCCTAGATGCTGGACGCAATAAATTTCTC
TTTCCACAGAAAAAGTGA

Upstream 100 bases:

>100_bases
TCAAAGCGATTGAAAAACGAAATAAAGAACAAGCAGCTCATGAAGTAACAGAGTATATTACTCTTTTCAAACGAATTGAT
GCTAAGAATGGAGAAAAGAA

Downstream 100 bases:

>100_bases
TTTTTGCGCATAAAAAAACTAGTGCGGAAAAAGGGAGTAAACCGCACTAGCTAAAAGGGAGTTTGGGATTTTCATTCTAA
AAAGGGAAAGAAATGAAAAT

Product: putative transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MNSDLTNKKILTRSSKVMLVLGIILIAANLRTPITSVGPLLGMIQSDLHLTNTMAGLLTTIPLLAFAGLSPFVSKLSRAL
GIEVLIFVALLTLVLGSLLRPFGGELNLFAGTFMIGLAIAVGNVILPSLIKKEFPFKLGLMTGVYSISMNLCAAIAAGLT
VPIAMNNRFSWHGSMVFWAILGIVALVIWLPQLKYNQRSTEKIATHLVTTSVWKSPLAWKISLFMGSQSAIFYISIAWLP
NILADQGLSSTSSGLMLSLMQFAVMPITFIIPIVAGRMKNQQLLVGISILFFLIGIFGIMFASGSVLILSIAIIVYGIGS
GMSFSLSMMFFNLRTTSATESADLSGMAQSIGYLFAASGPILFGTLHDALGSWQPTLYVLVGITMLMLYCGLDAGRNKFL
FPQKK

Sequences:

>Translated_405_residues
MNSDLTNKKILTRSSKVMLVLGIILIAANLRTPITSVGPLLGMIQSDLHLTNTMAGLLTTIPLLAFAGLSPFVSKLSRAL
GIEVLIFVALLTLVLGSLLRPFGGELNLFAGTFMIGLAIAVGNVILPSLIKKEFPFKLGLMTGVYSISMNLCAAIAAGLT
VPIAMNNRFSWHGSMVFWAILGIVALVIWLPQLKYNQRSTEKIATHLVTTSVWKSPLAWKISLFMGSQSAIFYISIAWLP
NILADQGLSSTSSGLMLSLMQFAVMPITFIIPIVAGRMKNQQLLVGISILFFLIGIFGIMFASGSVLILSIAIIVYGIGS
GMSFSLSMMFFNLRTTSATESADLSGMAQSIGYLFAASGPILFGTLHDALGSWQPTLYVLVGITMLMLYCGLDAGRNKFL
FPQKK
>Mature_405_residues
MNSDLTNKKILTRSSKVMLVLGIILIAANLRTPITSVGPLLGMIQSDLHLTNTMAGLLTTIPLLAFAGLSPFVSKLSRAL
GIEVLIFVALLTLVLGSLLRPFGGELNLFAGTFMIGLAIAVGNVILPSLIKKEFPFKLGLMTGVYSISMNLCAAIAAGLT
VPIAMNNRFSWHGSMVFWAILGIVALVIWLPQLKYNQRSTEKIATHLVTTSVWKSPLAWKISLFMGSQSAIFYISIAWLP
NILADQGLSSTSSGLMLSLMQFAVMPITFIIPIVAGRMKNQQLLVGISILFFLIGIFGIMFASGSVLILSIAIIVYGIGS
GMSFSLSMMFFNLRTTSATESADLSGMAQSIGYLFAASGPILFGTLHDALGSWQPTLYVLVGITMLMLYCGLDAGRNKFL
FPQKK

Specific function: Unknown

COG id: COG2807

COG function: function code P; Cyanate permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Cyanate porter (TC 2.A.1.17) family [H]

Homologues:

Organism=Escherichia coli, GI1788092, Length=394, Percent_Identity=38.5786802030457, Blast_Score=260, Evalue=1e-70,
Organism=Escherichia coli, GI1786536, Length=358, Percent_Identity=25.4189944134078, Blast_Score=103, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004747
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43576; Mature: 43576

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSDLTNKKILTRSSKVMLVLGIILIAANLRTPITSVGPLLGMIQSDLHLTNTMAGLLTT
CCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPLLAFAGLSPFVSKLSRALGIEVLIFVALLTLVLGSLLRPFGGELNLFAGTFMIGLAIA
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
VGNVILPSLIKKEFPFKLGLMTGVYSISMNLCAAIAAGLTVPIAMNNRFSWHGSMVFWAI
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHH
LGIVALVIWLPQLKYNQRSTEKIATHLVTTSVWKSPLAWKISLFMGSQSAIFYISIAWLP
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEHHHHH
NILADQGLSSTSSGLMLSLMQFAVMPITFIIPIVAGRMKNQQLLVGISILFFLIGIFGIM
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
FASGSVLILSIAIIVYGIGSGMSFSLSMMFFNLRTTSATESADLSGMAQSIGYLFAASGP
HHCCHHHHHHHHHHHHHCCCCCHHEEEEHEEEEECCCCCCCHHHHHHHHHHHHHHCCCCC
ILFGTLHDALGSWQPTLYVLVGITMLMLYCGLDAGRNKFLFPQKK
EEEEEHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNSDLTNKKILTRSSKVMLVLGIILIAANLRTPITSVGPLLGMIQSDLHLTNTMAGLLTT
CCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPLLAFAGLSPFVSKLSRALGIEVLIFVALLTLVLGSLLRPFGGELNLFAGTFMIGLAIA
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
VGNVILPSLIKKEFPFKLGLMTGVYSISMNLCAAIAAGLTVPIAMNNRFSWHGSMVFWAI
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHH
LGIVALVIWLPQLKYNQRSTEKIATHLVTTSVWKSPLAWKISLFMGSQSAIFYISIAWLP
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEHHHHH
NILADQGLSSTSSGLMLSLMQFAVMPITFIIPIVAGRMKNQQLLVGISILFFLIGIFGIM
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
FASGSVLILSIAIIVYGIGSGMSFSLSMMFFNLRTTSATESADLSGMAQSIGYLFAASGP
HHCCHHHHHHHHHHHHHCCCCCHHEEEEHEEEEECCCCCCCHHHHHHHHHHHHHHCCCCC
ILFGTLHDALGSWQPTLYVLVGITMLMLYCGLDAGRNKFLFPQKK
EEEEEHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]