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The map label for this gene is ydbT [H]

Identifier: 226223502

GI number: 226223502

Start: 921892

End: 923367

Strand: Direct

Name: ydbT [H]

Synonym: Lm4b_00901

Alternate gene names: 226223502

Gene position: 921892-923367 (Clockwise)

Preceding gene: 226223501

Following gene: 226223503

Centisome position: 31.65

GC content: 39.77

Gene sequence:

>1476_bases
ATGTTTGAAGAAAGACGCCTCCATCCGATTGCCCTCATTAAAGAAATTATTACGAACGTAAGACGCAATATTGTTCCTAT
CGTCGTCGGTTTATTTTCCGTTTTCCGCGCCATTAATAGTAACGGTTATTTGCCGGACTGGGCTGTATATTTAATTATTG
TCATCGTTATATTACTCATTTTAACCCCCGCAGTCTTAAAATACATAACCTACAAATACACCCTCGAAGACCAAGGGATT
CGCATCAAATACGGTTTGATTTTTCGAAAAAATACATACATACCTTACGAGCGCATCCAAACCGTCCAAAAGAAACAATG
GTTTTTCTTTATCCCATTTAATGTCTGCCAAATTTTAATCGAAACAGCTGGCGGTAACGGGAAAGCAGAAGCCGATTTAG
TCGCTGTCCCAGTTGGCGTAGTAGACGAATTAAATGATTTACGCGACGGTAAAAAGAGAGACATCCAAGAAGCCGTGCCA
GAAACCGAGGAAACCACAGTAGAAGTGGCAGAAGCACCAGAAAAAACGGTCATGCTACAAACAAAACAGCTTATTTTAAT
GGCAGTAACATCCGGCGGCGTTTTCGGGACGCTCCTTATCGTTCTAGCATTCATGCAACAATTCCGAGAAGTCATCCCGA
CAGACTGGATGGAAGCTCAAGCAGAAGAGTTATGGAAAATGGGCATTATCGTACTAATTGTATTAATTGTCTTGATTCTT
TTGGTATTATGGGGAATATCGATTGTGACGACATTGTTCAAGTATTTCCAGTTCAAATTGATGAAATATCCCAATTCACT
TGTTGTAGAAAAAGGACTATTAGAACGAAACCATACAACCATTTCACTTTCGCGTATTCAAGGAATCACCATTATTGAAT
CACCACTACGACAAATGCTCGGCTTAGTAGCGGTCAAAGTTACTACTGCAGGGAACTCAGGTGATGAAAAACTATCCGGC
GACATTTTACTTTTGCCTATTATGAAAAAAGCGTTGGCTTTAAAAACATTAAAAGAAATGCTACCAGATTATTTATTTGA
AATAGAAAAAATGGAACGTGCTCCAAAAGCCAGTTTGCGCAGATTTTTGCAGATTTACTTGATCTGGACAATTATCCCAG
CCGCAGTAGCAAGTATTTTATTTTTCCCACTCGGCTTAATTAGTATTATTTTGCCAGTTTTAGCAGGGATAAAAGGGGTA
GCCAGCTACCGCGCGACTGGAGTTTTCACAGATAAGCACACACTCCTTGTCCAGTCACGCCCAATTTTCTCCAAGTTAAC
GCACATTATCCGCAAAGAGCGAATTCAAGGTTTAAGCTTAAGACAAAGCATTTGGATGGAAAAAGGCCGATCAAGGCACT
TAAATGTTTGGCTTAAATCAGGAAGTACAAGCGCTGAAGCTTATGTTCGCTATATCAATCAAGACTTAGCTATCAAGGTA
TACAATTGGTACAGCCCGTCCAAAACAATAAATTAA

Upstream 100 bases:

>100_bases
ACAACTGCTGCAAAAACACATAAGATTGAAGCGGTAAACGAGTCTGAATCAGATGAACTTAGACATCATATTCTTGAACT
TGTGAAGGTGGCGAAAGAAG

Downstream 100 bases:

>100_bases
AAAAGAACACGTCATTTCCTAAAAATCGCTGATCAATAGCGACTGTAATTTTGGAAATGGCTGTTCTTTTATTTTTTGTT
CAATTACCCTGAAATCTGGT

Product: YbtB protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 491; Mature: 491

Protein sequence:

>491_residues
MFEERRLHPIALIKEIITNVRRNIVPIVVGLFSVFRAINSNGYLPDWAVYLIIVIVILLILTPAVLKYITYKYTLEDQGI
RIKYGLIFRKNTYIPYERIQTVQKKQWFFFIPFNVCQILIETAGGNGKAEADLVAVPVGVVDELNDLRDGKKRDIQEAVP
ETEETTVEVAEAPEKTVMLQTKQLILMAVTSGGVFGTLLIVLAFMQQFREVIPTDWMEAQAEELWKMGIIVLIVLIVLIL
LVLWGISIVTTLFKYFQFKLMKYPNSLVVEKGLLERNHTTISLSRIQGITIIESPLRQMLGLVAVKVTTAGNSGDEKLSG
DILLLPIMKKALALKTLKEMLPDYLFEIEKMERAPKASLRRFLQIYLIWTIIPAAVASILFFPLGLISIILPVLAGIKGV
ASYRATGVFTDKHTLLVQSRPIFSKLTHIIRKERIQGLSLRQSIWMEKGRSRHLNVWLKSGSTSAEAYVRYINQDLAIKV
YNWYSPSKTIN

Sequences:

>Translated_491_residues
MFEERRLHPIALIKEIITNVRRNIVPIVVGLFSVFRAINSNGYLPDWAVYLIIVIVILLILTPAVLKYITYKYTLEDQGI
RIKYGLIFRKNTYIPYERIQTVQKKQWFFFIPFNVCQILIETAGGNGKAEADLVAVPVGVVDELNDLRDGKKRDIQEAVP
ETEETTVEVAEAPEKTVMLQTKQLILMAVTSGGVFGTLLIVLAFMQQFREVIPTDWMEAQAEELWKMGIIVLIVLIVLIL
LVLWGISIVTTLFKYFQFKLMKYPNSLVVEKGLLERNHTTISLSRIQGITIIESPLRQMLGLVAVKVTTAGNSGDEKLSG
DILLLPIMKKALALKTLKEMLPDYLFEIEKMERAPKASLRRFLQIYLIWTIIPAAVASILFFPLGLISIILPVLAGIKGV
ASYRATGVFTDKHTLLVQSRPIFSKLTHIIRKERIQGLSLRQSIWMEKGRSRHLNVWLKSGSTSAEAYVRYINQDLAIKV
YNWYSPSKTIN
>Mature_491_residues
MFEERRLHPIALIKEIITNVRRNIVPIVVGLFSVFRAINSNGYLPDWAVYLIIVIVILLILTPAVLKYITYKYTLEDQGI
RIKYGLIFRKNTYIPYERIQTVQKKQWFFFIPFNVCQILIETAGGNGKAEADLVAVPVGVVDELNDLRDGKKRDIQEAVP
ETEETTVEVAEAPEKTVMLQTKQLILMAVTSGGVFGTLLIVLAFMQQFREVIPTDWMEAQAEELWKMGIIVLIVLIVLIL
LVLWGISIVTTLFKYFQFKLMKYPNSLVVEKGLLERNHTTISLSRIQGITIIESPLRQMLGLVAVKVTTAGNSGDEKLSG
DILLLPIMKKALALKTLKEMLPDYLFEIEKMERAPKASLRRFLQIYLIWTIIPAAVASILFFPLGLISIILPVLAGIKGV
ASYRATGVFTDKHTLLVQSRPIFSKLTHIIRKERIQGLSLRQSIWMEKGRSRHLNVWLKSGSTSAEAYVRYINQDLAIKV
YNWYSPSKTIN

Specific function: Unknown

COG id: COG3428

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0699 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005182
- InterPro:   IPR014529 [H]

Pfam domain/function: PF03703 DUF304 [H]

EC number: NA

Molecular weight: Translated: 55793; Mature: 55793

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEERRLHPIALIKEIITNVRRNIVPIVVGLFSVFRAINSNGYLPDWAVYLIIVIVILLI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
LTPAVLKYITYKYTLEDQGIRIKYGLIFRKNTYIPYERIQTVQKKQWFFFIPFNVCQILI
HHHHHHHHHHHEEEECCCCEEEEEEEEEECCCCCCHHHHHHHHHCCEEEEEHHHHHHHHH
ETAGGNGKAEADLVAVPVGVVDELNDLRDGKKRDIQEAVPETEETTVEVAEAPEKTVMLQ
HHCCCCCCCCCCEEEECHHHHHHHHHHCCCHHHHHHHHCCCCHHHEHHHHCCCCHHHHHH
TKQLILMAVTSGGVFGTLLIVLAFMQQFREVIPTDWMEAQAEELWKMGIIVLIVLIVLIL
HHHEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LVLWGISIVTTLFKYFQFKLMKYPNSLVVEKGLLERNHTTISLSRIQGITIIESPLRQML
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEHHHHCCCHHHHHHHHHHH
GLVAVKVTTAGNSGDEKLSGDILLLPIMKKALALKTLKEMLPDYLFEIEKMERAPKASLR
HHHEEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
RFLQIYLIWTIIPAAVASILFFPLGLISIILPVLAGIKGVASYRATGVFTDKHTLLVQSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCEEEEECC
PIFSKLTHIIRKERIQGLSLRQSIWMEKGRSRHLNVWLKSGSTSAEAYVRYINQDLAIKV
CHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCCEEEE
YNWYSPSKTIN
EEEECCCCCCC
>Mature Secondary Structure
MFEERRLHPIALIKEIITNVRRNIVPIVVGLFSVFRAINSNGYLPDWAVYLIIVIVILLI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
LTPAVLKYITYKYTLEDQGIRIKYGLIFRKNTYIPYERIQTVQKKQWFFFIPFNVCQILI
HHHHHHHHHHHEEEECCCCEEEEEEEEEECCCCCCHHHHHHHHHCCEEEEEHHHHHHHHH
ETAGGNGKAEADLVAVPVGVVDELNDLRDGKKRDIQEAVPETEETTVEVAEAPEKTVMLQ
HHCCCCCCCCCCEEEECHHHHHHHHHHCCCHHHHHHHHCCCCHHHEHHHHCCCCHHHHHH
TKQLILMAVTSGGVFGTLLIVLAFMQQFREVIPTDWMEAQAEELWKMGIIVLIVLIVLIL
HHHEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LVLWGISIVTTLFKYFQFKLMKYPNSLVVEKGLLERNHTTISLSRIQGITIIESPLRQML
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEHHHHCCCHHHHHHHHHHH
GLVAVKVTTAGNSGDEKLSGDILLLPIMKKALALKTLKEMLPDYLFEIEKMERAPKASLR
HHHEEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
RFLQIYLIWTIIPAAVASILFFPLGLISIILPVLAGIKGVASYRATGVFTDKHTLLVQSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCEEEEECC
PIFSKLTHIIRKERIQGLSLRQSIWMEKGRSRHLNVWLKSGSTSAEAYVRYINQDLAIKV
CHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCCEEEE
YNWYSPSKTIN
EEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]