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The map label for this gene is ysdA [H]

Identifier: 226223461

GI number: 226223461

Start: 882357

End: 882614

Strand: Reverse

Name: ysdA [H]

Synonym: Lm4b_00859

Alternate gene names: 226223461

Gene position: 882614-882357 (Counterclockwise)

Preceding gene: 226223467

Following gene: 226223458

Centisome position: 30.3

GC content: 40.7

Gene sequence:

>258_bases
ATGATTTTAACGATATATTTAATCGCGATAACGCTTGTTTCTTTTCTATTATTCGCTGTTGATAAACGGAAAGCAATTAA
ACACGCTTACCGGATACCTGAATCTGTACTGCTTTTCACCGCTTTTCTTGGTGGGGCGTTTGGTAGCTGGATGTCGATGC
AACTATTTCACCATAAAACCCAAAAACCAAAGTTCCGGATTTTAGTGCCGCTTGCGATGGTTTGGACTGTTGGAATGGTG
ATTTGGTGGTTGTACTGA

Upstream 100 bases:

>100_bases
TTGAATAATTTCTTTTGCCATTTTATCCCTGCTTTCTTTTATGGTATGCTTTTATTCTAATCAATAAAGTTTGTTTTAGC
AATGAAGGGGGATTTTCTAA

Downstream 100 bases:

>100_bases
ATTAACAAATCAGTAGCATTACCTCAAAAAAACATCAATTAACTTCTATATTTCTCGATAAAAAAATACCGACCAGAAAA
ATCTGGTCGGTATTTAGTTT

Product: protein YsdA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MILTIYLIAITLVSFLLFAVDKRKAIKHAYRIPESVLLFTAFLGGAFGSWMSMQLFHHKTQKPKFRILVPLAMVWTVGMV
IWWLY

Sequences:

>Translated_85_residues
MILTIYLIAITLVSFLLFAVDKRKAIKHAYRIPESVLLFTAFLGGAFGSWMSMQLFHHKTQKPKFRILVPLAMVWTVGMV
IWWLY
>Mature_85_residues
MILTIYLIAITLVSFLLFAVDKRKAIKHAYRIPESVLLFTAFLGGAFGSWMSMQLFHHKTQKPKFRILVPLAMVWTVGMV
IWWLY

Specific function: Unknown

COG id: COG3326

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010718 [H]

Pfam domain/function: PF06961 DUF1294 [H]

EC number: NA

Molecular weight: Translated: 9916; Mature: 9916

Theoretical pI: Translated: 10.90; Mature: 10.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILTIYLIAITLVSFLLFAVDKRKAIKHAYRIPESVLLFTAFLGGAFGSWMSMQLFHHKT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
QKPKFRILVPLAMVWTVGMVIWWLY
CCCCEEEHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MILTIYLIAITLVSFLLFAVDKRKAIKHAYRIPESVLLFTAFLGGAFGSWMSMQLFHHKT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
QKPKFRILVPLAMVWTVGMVIWWLY
CCCCEEEHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]