| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
Click here to switch to the map view.
The map label for this gene is manX [H]
Identifier: 226223400
GI number: 226223400
Start: 806111
End: 806596
Strand: Reverse
Name: manX [H]
Synonym: Lm4b_00798
Alternate gene names: 226223400
Gene position: 806596-806111 (Counterclockwise)
Preceding gene: 226223401
Following gene: 226223399
Centisome position: 27.69
GC content: 39.3
Gene sequence:
>486_bases ATGGAAATTCGCTTAGCACGTATTGATGATCGCTTAATTCATGGTCAAGTAGCAACCGTTTGGACAAAAGAAACGCAGGT AGAACGTATCATCGTTATTAGTGACGATGTAGCAAAAGATGAAGTGCGTAAAACACTTCTTACACAAGTAGCACCTCCAG GAGTTAAAGCAAGCGTCGTGGATGTACAAAAAGGTATCCGCGTATACAACAACCCTAAATATGCTACAACTCCAGTCATG CTATTATTCACTAACCCTACCGATGTGCTAACACTCGTAGAAGCAGGTGTAAACATTACAACTGTAAACATTGGTGGTAT GGCATTCCGCGAAGGTAAACACATGATTACAAATGCTGTGTCTGTGGACGAAACGGATGAAGCAGCATTCCGCAAATTAG ATGAAAAAGGAATTGAACTTGAAATTCGTAAAGTCGCTTCTGACAATAAAGTCAAACTTATCCCATTACTAGATAAAGAT AAATAA
Upstream 100 bases:
>100_bases ATCTAGTTGAAACAGCTCTTACAGCAGGATCAGGTGGCGTTAAGTCACTCAAACAATCATTACCAAAAATAGAAACCGAA GTCGGGGAGGACGATTTATA
Downstream 100 bases:
>100_bases TTCATCCGCGGCTCGCTTGTTTTTTAGAGCCCCGAAAATGCAAACGTTTAAAGGAAGACCTTTAAAGGGGTGATTCATGA ATAAAAGCTTATGTAATAGA
Product: mannose-specific phosphotransferase system (PTS) component IIB
Products: NA
Alternate protein names: EIIAB-Man; Mannose-specific phosphotransferase enzyme IIA component; EIII-Man; PTS system mannose-specific EIIA component; Mannose-specific phosphotransferase enzyme IIB component; PTS system mannose-specific EIIB component [H]
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MEIRLARIDDRLIHGQVATVWTKETQVERIIVISDDVAKDEVRKTLLTQVAPPGVKASVVDVQKGIRVYNNPKYATTPVM LLFTNPTDVLTLVEAGVNITTVNIGGMAFREGKHMITNAVSVDETDEAAFRKLDEKGIELEIRKVASDNKVKLIPLLDKD K
Sequences:
>Translated_161_residues MEIRLARIDDRLIHGQVATVWTKETQVERIIVISDDVAKDEVRKTLLTQVAPPGVKASVVDVQKGIRVYNNPKYATTPVM LLFTNPTDVLTLVEAGVNITTVNIGGMAFREGKHMITNAVSVDETDEAAFRKLDEKGIELEIRKVASDNKVKLIPLLDKD K >Mature_161_residues MEIRLARIDDRLIHGQVATVWTKETQVERIIVISDDVAKDEVRKTLLTQVAPPGVKASVVDVQKGIRVYNNPKYATTPVM LLFTNPTDVLTLVEAGVNITTVNIGGMAFREGKHMITNAVSVDETDEAAFRKLDEKGIELEIRKVASDNKVKLIPLLDKD K
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG3444
COG function: function code G; Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-4 domain [H]
Homologues:
Organism=Escherichia coli, GI1788120, Length=159, Percent_Identity=72.3270440251572, Blast_Score=227, Evalue=2e-61, Organism=Escherichia coli, GI87082217, Length=157, Percent_Identity=36.9426751592357, Blast_Score=98, Evalue=2e-22, Organism=Escherichia coli, GI1789527, Length=149, Percent_Identity=33.5570469798658, Blast_Score=73, Evalue=1e-14,
Paralogues:
None
Copy number: 220 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2880 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 260 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004701 - InterPro: IPR013789 - InterPro: IPR004720 - InterPro: IPR018455 [H]
Pfam domain/function: PF03610 EIIA-man; PF03830 PTSIIB_sorb [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 17879; Mature: 17879
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: PS51101 PTS_EIIB_TYPE_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIRLARIDDRLIHGQVATVWTKETQVERIIVISDDVAKDEVRKTLLTQVAPPGVKASVV CEEEEEECCCEEECCEEEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEE DVQKGIRVYNNPKYATTPVMLLFTNPTDVLTLVEAGVNITTVNIGGMAFREGKHMITNAV EHHCCCEEECCCCCCCCEEEEEEECCHHHHHHHHCCCEEEEEEECCEEEECCCEEEEEEE SVDETDEAAFRKLDEKGIELEIRKVASDNKVKLIPLLDKDK CCCCCHHHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCCC >Mature Secondary Structure MEIRLARIDDRLIHGQVATVWTKETQVERIIVISDDVAKDEVRKTLLTQVAPPGVKASVV CEEEEEECCCEEECCEEEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEE DVQKGIRVYNNPKYATTPVMLLFTNPTDVLTLVEAGVNITTVNIGGMAFREGKHMITNAV EHHCCCEEECCCCCCCCEEEEEEECCHHHHHHHHCCCEEEEEEECCEEEECCCEEEEEEE SVDETDEAAFRKLDEKGIELEIRKVASDNKVKLIPLLDKDK CCCCCHHHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]