Definition | Listeria monocytogenes Clip81459, complete genome. |
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Accession | NC_012488 |
Length | 2,912,690 |
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The map label for this gene is ykuE [H]
Identifier: 226223381
GI number: 226223381
Start: 788468
End: 789340
Strand: Direct
Name: ykuE [H]
Synonym: Lm4b_00779
Alternate gene names: 226223381
Gene position: 788468-789340 (Clockwise)
Preceding gene: 226223380
Following gene: 226223382
Centisome position: 27.07
GC content: 43.18
Gene sequence:
>873_bases ATGAAAAAAACTGGATGGGGTATACTTGGGGCAGTTGCTGCTTTCACAGGATATGCATACTGGTCAACCAAACATTTAAC TGTAACAGATTATGAAATAGTATCAGATAAAATTCCAGCAGAATGGGACGGCGCAACTTTTGTTCAGTTGTCTGATCTGC ATAGTGCAAGTTTTGGTTTATATAATAATCCTTTGCTTAGTATCGTGAATGAACTAGCGCCGGATGCTGTTTTTCTAACA GGAGATATGATTGATGGAGATGAGTCGCCATATGTAGCGATGGCAGTTGTGCGCAAATTGGCTAAAGAATTCCCGGTTTT TTATGTGAGCGGAAATCATGAGGGTCGAAGCGCATTTTATGAAGATTTTAAAGCAGACATGGAGAAACATCACGTTACTG TCCTTGAAAATGAACGCTATTTTCTAAAAAAAGATGGCGCCGCAATCATGGTAGCAGGCGTCCGGGATCCTCGTTTTGTA AGAGATGACTGGGCAGAAAAAGAACTACCAAAAGAAGTATGGGAAGAAGCGGCATTAAAAGAAGCTTTAGACGATGCGAC AGCTAATTTATCACCGGATTACTTTACGATATTACTGGCGCATCGTCCGGAGTTTTGGCCACTATACCAAGCCTATCCAA TTGATTTAGTATTATCTGGACATGCGCACGGCGGTCAATTTAGACTACCTTTAACAGAAGGCCTTTTCGCACCGGGACAA GGTCTCATGCCGAAATGGACAGCAGGGATTCACCGGGCTGGCGGTAAAGCGCTTATTGTGAGCCGCGGCTTAGGAAATGT CACGAAACTACCGCGCTTATTTAATGACCCAGAAATCATTCGAATGACACTTAGAGCAAAAGGGGATGCATAG
Upstream 100 bases:
>100_bases TACAGAAGCTAGCAGAATACCAAGTAGCTGAGTAAAGCGAGTTCCAGCTGAATTTGCTATAATGAAACATACAGCAAATT TAGTGAGGAGATTTCTAACT
Downstream 100 bases:
>100_bases GAAAAGTGATTTATTTAGATAATGAAGATGTACTCGATCAAGCGTACAACTTTGCGATGGAAGAATATGCGCTTCGTTCT TTAGATGAAAATGAAACGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MKKTGWGILGAVAAFTGYAYWSTKHLTVTDYEIVSDKIPAEWDGATFVQLSDLHSASFGLYNNPLLSIVNELAPDAVFLT GDMIDGDESPYVAMAVVRKLAKEFPVFYVSGNHEGRSAFYEDFKADMEKHHVTVLENERYFLKKDGAAIMVAGVRDPRFV RDDWAEKELPKEVWEEAALKEALDDATANLSPDYFTILLAHRPEFWPLYQAYPIDLVLSGHAHGGQFRLPLTEGLFAPGQ GLMPKWTAGIHRAGGKALIVSRGLGNVTKLPRLFNDPEIIRMTLRAKGDA
Sequences:
>Translated_290_residues MKKTGWGILGAVAAFTGYAYWSTKHLTVTDYEIVSDKIPAEWDGATFVQLSDLHSASFGLYNNPLLSIVNELAPDAVFLT GDMIDGDESPYVAMAVVRKLAKEFPVFYVSGNHEGRSAFYEDFKADMEKHHVTVLENERYFLKKDGAAIMVAGVRDPRFV RDDWAEKELPKEVWEEAALKEALDDATANLSPDYFTILLAHRPEFWPLYQAYPIDLVLSGHAHGGQFRLPLTEGLFAPGQ GLMPKWTAGIHRAGGKALIVSRGLGNVTKLPRLFNDPEIIRMTLRAKGDA >Mature_290_residues MKKTGWGILGAVAAFTGYAYWSTKHLTVTDYEIVSDKIPAEWDGATFVQLSDLHSASFGLYNNPLLSIVNELAPDAVFLT GDMIDGDESPYVAMAVVRKLAKEFPVFYVSGNHEGRSAFYEDFKADMEKHHVTVLENERYFLKKDGAAIMVAGVRDPRFV RDDWAEKELPKEVWEEAALKEALDDATANLSPDYFTILLAHRPEFWPLYQAYPIDLVLSGHAHGGQFRLPLTEGLFAPGQ GLMPKWTAGIHRAGGKALIVSRGLGNVTKLPRLFNDPEIIRMTLRAKGDA
Specific function: Unknown
COG id: COG1408
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallophosphoesterase superfamily [H]
Homologues:
Organism=Homo sapiens, GI210031210, Length=276, Percent_Identity=27.1739130434783, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI210031196, Length=276, Percent_Identity=27.1739130434783, Blast_Score=73, Evalue=3e-13, Organism=Escherichia coli, GI87081695, Length=275, Percent_Identity=28, Blast_Score=69, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 - InterPro: IPR006311 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 32260; Mature: 32260
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTGWGILGAVAAFTGYAYWSTKHLTVTDYEIVSDKIPAEWDGATFVQLSDLHSASFGL CCCCCCHHHHHHHHHHHHEEEEECEEEEECHHHHCCCCCCCCCCEEEEEEECCCCCCCCC YNNPLLSIVNELAPDAVFLTGDMIDGDESPYVAMAVVRKLAKEFPVFYVSGNHEGRSAFY CCCHHHHHHHHHCCCEEEEECCEECCCCCCCHHHHHHHHHHHHCCEEEEECCCCCHHHHH EDFKADMEKHHVTVLENERYFLKKDGAAIMVAGVRDPRFVRDDWAEKELPKEVWEEAALK HHHHHHHHHCCEEEEECCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH EALDDATANLSPDYFTILLAHRPEFWPLYQAYPIDLVLSGHAHGGQFRLPLTEGLFAPGQ HHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEECHHHCCCCCCC GLMPKWTAGIHRAGGKALIVSRGLGNVTKLPRLFNDPEIIRMTLRAKGDA CCCCHHHHHHHCCCCCEEEEECCCCCHHHHHHHCCCHHHEEEEEECCCCC >Mature Secondary Structure MKKTGWGILGAVAAFTGYAYWSTKHLTVTDYEIVSDKIPAEWDGATFVQLSDLHSASFGL CCCCCCHHHHHHHHHHHHEEEEECEEEEECHHHHCCCCCCCCCCEEEEEEECCCCCCCCC YNNPLLSIVNELAPDAVFLTGDMIDGDESPYVAMAVVRKLAKEFPVFYVSGNHEGRSAFY CCCHHHHHHHHHCCCEEEEECCEECCCCCCCHHHHHHHHHHHHCCEEEEECCCCCHHHHH EDFKADMEKHHVTVLENERYFLKKDGAAIMVAGVRDPRFVRDDWAEKELPKEVWEEAALK HHHHHHHHHCCEEEEECCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH EALDDATANLSPDYFTILLAHRPEFWPLYQAYPIDLVLSGHAHGGQFRLPLTEGLFAPGQ HHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEECHHHCCCCCCC GLMPKWTAGIHRAGGKALIVSRGLGNVTKLPRLFNDPEIIRMTLRAKGDA CCCCHHHHHHHCCCCCEEEEECCCCCHHHHHHHCCCHHHEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]