| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226223281
Identifier: 226223281
GI number: 226223281
Start: 696275
End: 696691
Strand: Direct
Name: 226223281
Synonym: Lm4b_00678
Alternate gene names: NA
Gene position: 696275-696691 (Clockwise)
Preceding gene: 226223279
Following gene: 226223282
Centisome position: 23.9
GC content: 40.29
Gene sequence:
>417_bases ATGTCGATTATTGCACGAGAACTAACGAAAGCGGAAGAAGCTGAAATTATCCGTTTAAAAGAAGAAGGCGAAGTGATGCT CCAAACAGACGGAACTCCAGAAGAACGCATCGAGAAAATTGCTGAGTACTTAAAACAAACCTCGCCAGACCCTGATTTAG CAGAAGAGCTTGGTTATATTTTAGGCTCTTTGTACGGAGAGGCAGTGCGTGAAAAGTATGAGTGGCGCTGGCTGTTTGTC TCAGAAAATGATTTAGAAGGCTACGCGATTACGTCGAAAGAGCATGGCTATACATTTATGGTGCATGATTATTTTATGCA AGTAATCGTTCAGAATAAGCCAGATAATAGCAAAATGCTATTTGAATTGATGGTTGATATGACTGGGAATCGAAACGATT TTCGGATGATTGGTTAA
Upstream 100 bases:
>100_bases ATATAAAAATTGCTGTACTTCTTTCATTATACATGACGAACATATCGGATGCGAAAGATTGAGCTTTTGAGTTATAATGA GTGGGGAAAGGGTGTTTCTA
Downstream 100 bases:
>100_bases GGAGAATAACTGGGAATAACTGCTATTTTGACTATATCCTGGACAGAGAAGTTTTAAATTTTTTCACTTTTTGGTCATTT TCGTCGTTAGATTAGTTATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MSIIARELTKAEEAEIIRLKEEGEVMLQTDGTPEERIEKIAEYLKQTSPDPDLAEELGYILGSLYGEAVREKYEWRWLFV SENDLEGYAITSKEHGYTFMVHDYFMQVIVQNKPDNSKMLFELMVDMTGNRNDFRMIG
Sequences:
>Translated_138_residues MSIIARELTKAEEAEIIRLKEEGEVMLQTDGTPEERIEKIAEYLKQTSPDPDLAEELGYILGSLYGEAVREKYEWRWLFV SENDLEGYAITSKEHGYTFMVHDYFMQVIVQNKPDNSKMLFELMVDMTGNRNDFRMIG >Mature_137_residues SIIARELTKAEEAEIIRLKEEGEVMLQTDGTPEERIEKIAEYLKQTSPDPDLAEELGYILGSLYGEAVREKYEWRWLFVS ENDLEGYAITSKEHGYTFMVHDYFMQVIVQNKPDNSKMLFELMVDMTGNRNDFRMIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16111; Mature: 15979
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIIARELTKAEEAEIIRLKEEGEVMLQTDGTPEERIEKIAEYLKQTSPDPDLAEELGYI CCCHHHHHHCCCCHHEEEEECCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH LGSLYGEAVREKYEWRWLFVSENDLEGYAITSKEHGYTFMVHDYFMQVIVQNKPDNSKML HHHHHHHHHHHHHCEEEEEEECCCCCCEEEECCCCCEEEEHHHHHHHHHHCCCCCCHHHH FELMVDMTGNRNDFRMIG HHHHHHCCCCCCCEEECC >Mature Secondary Structure SIIARELTKAEEAEIIRLKEEGEVMLQTDGTPEERIEKIAEYLKQTSPDPDLAEELGYI CCHHHHHHCCCCHHEEEEECCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH LGSLYGEAVREKYEWRWLFVSENDLEGYAITSKEHGYTFMVHDYFMQVIVQNKPDNSKML HHHHHHHHHHHHHCEEEEEEECCCCCCEEEECCCCCEEEEHHHHHHHHHHCCCCCCHHHH FELMVDMTGNRNDFRMIG HHHHHHCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA