Definition Listeria monocytogenes Clip81459, complete genome.
Accession NC_012488
Length 2,912,690

Click here to switch to the map view.

The map label for this gene is 226223137

Identifier: 226223137

GI number: 226223137

Start: 543019

End: 543378

Strand: Reverse

Name: 226223137

Synonym: Lm4b_00534b

Alternate gene names: NA

Gene position: 543378-543019 (Counterclockwise)

Preceding gene: 226223138

Following gene: 226223119

Centisome position: 18.66

GC content: 40.0

Gene sequence:

>360_bases
ATGGAACAAATTCTATTTATCCAAACTGGCTTTGGCGTTGATGTTCACGGCCAAAATATTACAAAAGCAGCCGAACGAGC
TGTAAGAAATGCGATTTTTACGAACTCTATGCCCGGTATTCAAGGGCTTCTTCCAGATGGCGACTTACAAAACATGGTTG
TTAATATCAAATTGGCGCTACCGTGTGATGAAGAAAAACTTGACGAAGATACCATTCGCGCGATTATCCCTTATGGCACT
GTAACTATTGAGAAAATGGCTGGCGGAATGATGACTACAAGCGGCATTTTCTTAGAAGACAAAGAAGACAAAAACGATTT
AATGTATATCGTCAACGCTTCTGTTGAAACTGGATACTAA

Upstream 100 bases:

>100_bases
CTCCGATACTGACGGATTACATTTCACTGAAGTTATGGAAGGATATGCGAAAAACCGACCAGGCGCCGCTTTGATAAAAG
ATTTTAAGGAGTGATTTATG

Downstream 100 bases:

>100_bases
AGAAAAAACCATCTGACTTTCTCGTCAGATGGTTTTTGGATTTATTAAATAATCTAAAATAGCCTCAAGCATTTGTTTAT
TATCTTCTGGAACATCCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MEQILFIQTGFGVDVHGQNITKAAERAVRNAIFTNSMPGIQGLLPDGDLQNMVVNIKLALPCDEEKLDEDTIRAIIPYGT
VTIEKMAGGMMTTSGIFLEDKEDKNDLMYIVNASVETGY

Sequences:

>Translated_119_residues
MEQILFIQTGFGVDVHGQNITKAAERAVRNAIFTNSMPGIQGLLPDGDLQNMVVNIKLALPCDEEKLDEDTIRAIIPYGT
VTIEKMAGGMMTTSGIFLEDKEDKNDLMYIVNASVETGY
>Mature_119_residues
MEQILFIQTGFGVDVHGQNITKAAERAVRNAIFTNSMPGIQGLLPDGDLQNMVVNIKLALPCDEEKLDEDTIRAIIPYGT
VTIEKMAGGMMTTSGIFLEDKEDKNDLMYIVNASVETGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13055; Mature: 13055

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQILFIQTGFGVDVHGQNITKAAERAVRNAIFTNSMPGIQGLLPDGDLQNMVVNIKLAL
CCEEEEEEECCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEC
PCDEEKLDEDTIRAIIPYGTVTIEKMAGGMMTTSGIFLEDKEDKNDLMYIVNASVETGY
CCCHHHCCCCCEEEEECCCCEEEEHHCCCEEECCCEEEECCCCCCCEEEEEECCEECCC
>Mature Secondary Structure
MEQILFIQTGFGVDVHGQNITKAAERAVRNAIFTNSMPGIQGLLPDGDLQNMVVNIKLAL
CCEEEEEEECCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEC
PCDEEKLDEDTIRAIIPYGTVTIEKMAGGMMTTSGIFLEDKEDKNDLMYIVNASVETGY
CCCHHHCCCCCEEEEECCCCEEEEHHCCCEEECCCEEEECCCCCCCEEEEEECCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA