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The map label for this gene is petP [H]

Identifier: 226223138

GI number: 226223138

Start: 543385

End: 543843

Strand: Reverse

Name: petP [H]

Synonym: Lm4b_00535

Alternate gene names: 226223138

Gene position: 543843-543385 (Counterclockwise)

Preceding gene: 226223141

Following gene: 226223137

Centisome position: 18.67

GC content: 40.52

Gene sequence:

>459_bases
ATGAACAATGAGCAAAACATGAATCAACAAATCGCTTTATTTTACTTTGGTTATAAAGCATTTACAGAGACCGCTGATTT
GATTATTGCCAAACATTCACTCAAAAGATTGCATCATCGTATTTTATTTTTCACGGCGCGGATGCCTGGACTTACAATTA
ATGAACTTTTAACTTTTTTAGAAATATCAAAACAAGCCCTACACCAGCCGCTCGCTGAACTGAAAGAGCGCGAACTTCTC
ACGATCGAGCAAGGTAGACGCGACAAACGCCAACGCTGCATCTTCCTAACTACAGCAGGCAAAGAATTAGAAAATGAACT
TGGTGCCGCACAACGTAAGCAAATGGCAGAAATATTCGCCAATTCCTCCGATACTGACGGATTACATTTCACTGAAGTTA
TGGAAGGATATGCGAAAAACCGACCAGGCGCCGCTTTGATAAAAGATTTTAAGGAGTGA

Upstream 100 bases:

>100_bases
AATAATGCGAAAAAGCTTCTAAAAAAGTGATGCGCTAACTGTTATTGTGTCCCCTTATTTATGCTATACTGTTGATATTG
ACAGAAAAAGGGGTATATTT

Downstream 100 bases:

>100_bases
TTTATGATGGAACAAATTCTATTTATCCAAACTGGCTTTGGCGTTGATGTTCACGGCCAAAATATTACAAAAGCAGCCGA
ACGAGCTGTAAGAAATGCGA

Product: transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MNNEQNMNQQIALFYFGYKAFTETADLIIAKHSLKRLHHRILFFTARMPGLTINELLTFLEISKQALHQPLAELKERELL
TIEQGRRDKRQRCIFLTTAGKELENELGAAQRKQMAEIFANSSDTDGLHFTEVMEGYAKNRPGAALIKDFKE

Sequences:

>Translated_152_residues
MNNEQNMNQQIALFYFGYKAFTETADLIIAKHSLKRLHHRILFFTARMPGLTINELLTFLEISKQALHQPLAELKERELL
TIEQGRRDKRQRCIFLTTAGKELENELGAAQRKQMAEIFANSSDTDGLHFTEVMEGYAKNRPGAALIKDFKE
>Mature_152_residues
MNNEQNMNQQIALFYFGYKAFTETADLIIAKHSLKRLHHRILFFTARMPGLTINELLTFLEISKQALHQPLAELKERELL
TIEQGRRDKRQRCIFLTTAGKELENELGAAQRKQMAEIFANSSDTDGLHFTEVMEGYAKNRPGAALIKDFKE

Specific function: Necessary for photosynthetic and respiratory growth [H]

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 17528; Mature: 17528

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNEQNMNQQIALFYFGYKAFTETADLIIAKHSLKRLHHRILFFTARMPGLTINELLTFL
CCCCCCCCCEEEHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
EISKQALHQPLAELKERELLTIEQGRRDKRQRCIFLTTAGKELENELGAAQRKQMAEIFA
HHHHHHHHHHHHHHHHCCCHHHHHCCCHHHCEEEEEEECCHHHHHHHHHHHHHHHHHHHC
NSSDTDGLHFTEVMEGYAKNRPGAALIKDFKE
CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCC
>Mature Secondary Structure
MNNEQNMNQQIALFYFGYKAFTETADLIIAKHSLKRLHHRILFFTARMPGLTINELLTFL
CCCCCCCCCEEEHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
EISKQALHQPLAELKERELLTIEQGRRDKRQRCIFLTTAGKELENELGAAQRKQMAEIFA
HHHHHHHHHHHHHHHHCCCHHHHHCCCHHHCEEEEEEECCHHHHHHHHHHHHHHHHHHHC
NSSDTDGLHFTEVMEGYAKNRPGAALIKDFKE
CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1323023 [H]