| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is (cry22Aa [H]
Identifier: 226223021
GI number: 226223021
Start: 421111
End: 422334
Strand: Direct
Name: (cry22Aa [H]
Synonym: Lm4b_00415
Alternate gene names: 226223021
Gene position: 421111-422334 (Clockwise)
Preceding gene: 226223019
Following gene: 226223022
Centisome position: 14.46
GC content: 35.87
Gene sequence:
>1224_bases ATGAAAAAAATAATCGCGTTAATCACAGCAGTTGCACTTCTATCAATGATTGGATTTGCCTTTATCCCTGGTACTGTTGC GAATGCAGCGAATTCATCAGAAAGCAGTTTAACATACAAAGATGTACGCAGTGGATTTTACTTTGTTGGTTATGAAAATG TACAACTTGAAACAGGAAAAACATACAAGTACACAGTAGCGTATGAAGCAAATGTTGATATGAAAATGACAGATACTATT ACAGGACAATCAGCAAAAGCAGGACTTTTTACACCAAAATCATCCGGTGCCGAGCTGAACACTAGTTACGTAAGCCGAAC AAAGAATAACGTTATAGACGTAGCTGATGCAGGTAATAAGGTTTTTAAACACACATTTGAATTTACAGCGAAGGAAAATA CAAAAGCAGATATCGGTGTTTTCTTAGGAGCAGGTTCTGTTCTTCCAACAACTCCAGAAACCACGTCCCTTTGGAAAAAC GTAACCGTGACAAATGAAACTCCACTAGTACAAGCGGAGGCTCCAGTTATTAGTGCAGAAGATAAAACTATCAATCAAAA TGAAAGTTTTAATCCACTAAATGAAGTCACTGCGTCAGACGAAAAAGACGGTGATATTACAAAGGACATCCACGTAACCA AAAATACGGTAGATACGACTAAGAGTGGCAAATATGATGTGGATTATAGCGTTACAAATTCAAGCAACTTAACAACGACA AAAAGTATTAAAGTAACCGTAACCCCAGCAGCAATAAGCAAAAATACAGCCCCAGTTATTAATGCAAAAGATCAAACAAT CAAAGTTGGAGATGTGTTTAATGTGTTAAAAGGAGTTACTGCGAAAGATAACGAAGATGGTGATTTAACAGCAAAAATCA AAGTGACCAAGGATACAGTGAATAATTCGAAAAAAGGTGTTTATCAAGTTACATATACTGTGACAGATTCTGGCAATCTA TCAGCTTCACTTACAATTAAAGTGACTGTAACTCAAGATGGAAAACTAATAGTAAATCCAAGTGATCCAACAAAGCCATC TATCACAAAAACACCTGTGGAACCAACAAAAATTGAAAAAGATCCTGAAAATAGAGCGACTTCCGTTTTGAAAGCAAGTA AAATACCAAAAACTGGTGATAGTTCAATGATATGGCTAGTATTTGTCGGACTCGGCTTAACAGCTATTGGTATTAGTTCT TATCAAAAAAAAGCAAATAAATAA
Upstream 100 bases:
>100_bases CTTTGGTTAATTGCCAATTAGAATAAGTTGAAATATAGGGTTAAGGCTAACTTAACCCTATTTTCTAATTAAAGATGTAA ATAAGGAGGATTTTAAATCC
Downstream 100 bases:
>100_bases TGCATACTGGATGAAAAGAGTATTTTAGATTAGATACTCTTTTCATTAACTAGATGGTAAAATGGCATTCTAAAGCTGTT TTTAAACAGCTTTATAGAGA
Product: cell surface protein (LPXTG motif)
Products: NA
Alternate protein names: 79 kDa crystal protein; Crystaline entomocidal protoxin; Insecticidal delta-endotoxin CryXXIIA(a) [H]
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MKKIIALITAVALLSMIGFAFIPGTVANAANSSESSLTYKDVRSGFYFVGYENVQLETGKTYKYTVAYEANVDMKMTDTI TGQSAKAGLFTPKSSGAELNTSYVSRTKNNVIDVADAGNKVFKHTFEFTAKENTKADIGVFLGAGSVLPTTPETTSLWKN VTVTNETPLVQAEAPVISAEDKTINQNESFNPLNEVTASDEKDGDITKDIHVTKNTVDTTKSGKYDVDYSVTNSSNLTTT KSIKVTVTPAAISKNTAPVINAKDQTIKVGDVFNVLKGVTAKDNEDGDLTAKIKVTKDTVNNSKKGVYQVTYTVTDSGNL SASLTIKVTVTQDGKLIVNPSDPTKPSITKTPVEPTKIEKDPENRATSVLKASKIPKTGDSSMIWLVFVGLGLTAIGISS YQKKANK
Sequences:
>Translated_407_residues MKKIIALITAVALLSMIGFAFIPGTVANAANSSESSLTYKDVRSGFYFVGYENVQLETGKTYKYTVAYEANVDMKMTDTI TGQSAKAGLFTPKSSGAELNTSYVSRTKNNVIDVADAGNKVFKHTFEFTAKENTKADIGVFLGAGSVLPTTPETTSLWKN VTVTNETPLVQAEAPVISAEDKTINQNESFNPLNEVTASDEKDGDITKDIHVTKNTVDTTKSGKYDVDYSVTNSSNLTTT KSIKVTVTPAAISKNTAPVINAKDQTIKVGDVFNVLKGVTAKDNEDGDLTAKIKVTKDTVNNSKKGVYQVTYTVTDSGNL SASLTIKVTVTQDGKLIVNPSDPTKPSITKTPVEPTKIEKDPENRATSVLKASKIPKTGDSSMIWLVFVGLGLTAIGISS YQKKANK >Mature_407_residues MKKIIALITAVALLSMIGFAFIPGTVANAANSSESSLTYKDVRSGFYFVGYENVQLETGKTYKYTVAYEANVDMKMTDTI TGQSAKAGLFTPKSSGAELNTSYVSRTKNNVIDVADAGNKVFKHTFEFTAKENTKADIGVFLGAGSVLPTTPETTSLWKN VTVTNETPLVQAEAPVISAEDKTINQNESFNPLNEVTASDEKDGDITKDIHVTKNTVDTTKSGKYDVDYSVTNSSNLTTT KSIKVTVTPAAISKNTAPVINAKDQTIKVGDVFNVLKGVTAKDNEDGDLTAKIKVTKDTVNNSKKGVYQVTYTVTDSGNL SASLTIKVTVTQDGKLIVNPSDPTKPSITKTPVEPTKIEKDPENRATSVLKASKIPKTGDSSMIWLVFVGLGLTAIGISS YQKKANK
Specific function: Promotes colloidosmotic lysis by binding to the midgut epithelial cells of hymenopteran species [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011080 - InterPro: IPR008985 - InterPro: IPR013320 [H]
Pfam domain/function: PF07523 Big_3 [H]
EC number: NA
Molecular weight: Translated: 43576; Mature: 43576
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIIALITAVALLSMIGFAFIPGTVANAANSSESSLTYKDVRSGFYFVGYENVQLETGK CHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCEEHHHHHCCEEEEEEEEEEEECCC TYKYTVAYEANVDMKMTDTITGQSAKAGLFTPKSSGAELNTSYVSRTKNNVIDVADAGNK EEEEEEEEECCCCEEEEEEECCCCCCCCEECCCCCCCEECHHHHHHCCCCEEEEECCCCH VFKHTFEFTAKENTKADIGVFLGAGSVLPTTPETTSLWKNVTVTNETPLVQAEAPVISAE HEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCHHHHHEEEEECCCCCEEEECCCEEECC DKTINQNESFNPLNEVTASDEKDGDITKDIHVTKNTVDTTKSGKYDVDYSVTNSSNLTTT CCCCCCCCCCCCHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEEECCCCCEEE KSIKVTVTPAAISKNTAPVINAKDQTIKVGDVFNVLKGVTAKDNEDGDLTAKIKVTKDTV EEEEEEEECHHHCCCCCCEECCCCCEEEEHHHHHHHCCCCCCCCCCCCEEEEEEEEECCC NNSKKGVYQVTYTVTDSGNLSASLTIKVTVTQDGKLIVNPSDPTKPSITKTPVEPTKIEK CCCCCCEEEEEEEEECCCCEEEEEEEEEEEECCCEEEECCCCCCCCCCEECCCCCCCCCC DPENRATSVLKASKIPKTGDSSMIWLVFVGLGLTAIGISSYQKKANK CCCHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHEECHHHHHHHCCC >Mature Secondary Structure MKKIIALITAVALLSMIGFAFIPGTVANAANSSESSLTYKDVRSGFYFVGYENVQLETGK CHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCEEHHHHHCCEEEEEEEEEEEECCC TYKYTVAYEANVDMKMTDTITGQSAKAGLFTPKSSGAELNTSYVSRTKNNVIDVADAGNK EEEEEEEEECCCCEEEEEEECCCCCCCCEECCCCCCCEECHHHHHHCCCCEEEEECCCCH VFKHTFEFTAKENTKADIGVFLGAGSVLPTTPETTSLWKNVTVTNETPLVQAEAPVISAE HEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCHHHHHEEEEECCCCCEEEECCCEEECC DKTINQNESFNPLNEVTASDEKDGDITKDIHVTKNTVDTTKSGKYDVDYSVTNSSNLTTT CCCCCCCCCCCCHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEEECCCCCEEE KSIKVTVTPAAISKNTAPVINAKDQTIKVGDVFNVLKGVTAKDNEDGDLTAKIKVTKDTV EEEEEEEECHHHCCCCCCEECCCCCEEEEHHHHHHHCCCCCCCCCCCCEEEEEEEEECCC NNSKKGVYQVTYTVTDSGNLSASLTIKVTVTQDGKLIVNPSDPTKPSITKTPVEPTKIEK CCCCCCEEEEEEEEECCCCEEEEEEEEEEEECCCEEEECCCCCCCCCCEECCCCCCCCCC DPENRATSVLKASKIPKTGDSSMIWLVFVGLGLTAIGISSYQKKANK CCCHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHEECHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA