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The map label for this gene is 226223022

Identifier: 226223022

GI number: 226223022

Start: 422451

End: 423101

Strand: Direct

Name: 226223022

Synonym: Lm4b_00416

Alternate gene names: NA

Gene position: 422451-423101 (Clockwise)

Preceding gene: 226223021

Following gene: 226223023

Centisome position: 14.5

GC content: 30.88

Gene sequence:

>651_bases
ATGCCAAAAATTGCTAAAGGTAATCGACTCGAGAATGTTGCTTTTGAGTACATTAAGAACAAAATCACAACTGGGGAGTA
TCCAACGGGTTATCGTGTTGTAGAAGCAAAGTTATCTCAAGAACTAAATATGAGTAGGACACCAATTAGGCGAGCGATTA
TCAACCTTTGCCATTCTGGATTTTTAGTCCACCAATATAATCGGGGTGCTTTTGTTCAAAACACTGAAGTAACTATTACA
GAATTTTTTTCGCGAATGAAATTAGTCGAACTATTGATGTATGAAAGTACAGAAAAATTAATTCTACGTGAAGATTATAT
TGTAGTGGACGATATAATAGAAATAGCAGAGAAAGTAATTCAATATGAAAAAAACAAAGAATATGAATTAATGCGCGATA
CGTTTGAAGATTTTATCGTCGCATTTATAGGTAAGCTAAATAATGATTATTTTAATAGAATAATTCAAGAATTATGGAAT
GGAATCAATGATAATGCAACAAAAGAAGTAAGACTAATTATTGTTTCGGCAAGTGATCGAATTGCGGAAGAATTAGCTAA
TATAATTGAAATTTTAAAATCATGGAATTACGGGGAACTAAAAAAATGTTTTCAACACATAATGAACGCAATGATTTTGA
TTGCTTTTTAA

Upstream 100 bases:

>100_bases
AGAGTATTTTAGATTAGATACTCTTTTCATTAACTAGATGGTAAAATGGCATTCTAAAGCTGTTTTTAAACAGCTTTATA
GAGAGAGAGGGGAATCATTT

Downstream 100 bases:

>100_bases
AGAGAGGTTTTTAAATATTGAAAAAAATAAGCTGGGTGATTATCATGCTGGTTATCGTTGCTGCATCGGTTGGCTATTAT
TTTATAAAAGAAAATGAGCG

Product: transcription regulator

Products: NA

Alternate protein names: Transcription Regulator

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MPKIAKGNRLENVAFEYIKNKITTGEYPTGYRVVEAKLSQELNMSRTPIRRAIINLCHSGFLVHQYNRGAFVQNTEVTIT
EFFSRMKLVELLMYESTEKLILREDYIVVDDIIEIAEKVIQYEKNKEYELMRDTFEDFIVAFIGKLNNDYFNRIIQELWN
GINDNATKEVRLIIVSASDRIAEELANIIEILKSWNYGELKKCFQHIMNAMILIAF

Sequences:

>Translated_216_residues
MPKIAKGNRLENVAFEYIKNKITTGEYPTGYRVVEAKLSQELNMSRTPIRRAIINLCHSGFLVHQYNRGAFVQNTEVTIT
EFFSRMKLVELLMYESTEKLILREDYIVVDDIIEIAEKVIQYEKNKEYELMRDTFEDFIVAFIGKLNNDYFNRIIQELWN
GINDNATKEVRLIIVSASDRIAEELANIIEILKSWNYGELKKCFQHIMNAMILIAF
>Mature_215_residues
PKIAKGNRLENVAFEYIKNKITTGEYPTGYRVVEAKLSQELNMSRTPIRRAIINLCHSGFLVHQYNRGAFVQNTEVTITE
FFSRMKLVELLMYESTEKLILREDYIVVDDIIEIAEKVIQYEKNKEYELMRDTFEDFIVAFIGKLNNDYFNRIIQELWNG
INDNATKEVRLIIVSASDRIAEELANIIEILKSWNYGELKKCFQHIMNAMILIAF

Specific function: Unknown

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25334; Mature: 25203

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKIAKGNRLENVAFEYIKNKITTGEYPTGYRVVEAKLSQELNMSRTPIRRAIINLCHSG
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
FLVHQYNRGAFVQNTEVTITEFFSRMKLVELLMYESTEKLILREDYIVVDDIIEIAEKVI
CEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHH
QYEKNKEYELMRDTFEDFIVAFIGKLNNDYFNRIIQELWNGINDNATKEVRLIIVSASDR
HHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCHH
IAEELANIIEILKSWNYGELKKCFQHIMNAMILIAF
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PKIAKGNRLENVAFEYIKNKITTGEYPTGYRVVEAKLSQELNMSRTPIRRAIINLCHSG
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
FLVHQYNRGAFVQNTEVTITEFFSRMKLVELLMYESTEKLILREDYIVVDDIIEIAEKVI
CEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHH
QYEKNKEYELMRDTFEDFIVAFIGKLNNDYFNRIIQELWNGINDNATKEVRLIIVSASDR
HHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCHH
IAEELANIIEILKSWNYGELKKCFQHIMNAMILIAF
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA