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The map label for this gene is yycJ [H]

Identifier: 226222927

GI number: 226222927

Start: 323693

End: 324523

Strand: Direct

Name: yycJ [H]

Synonym: Lm4b_00319

Alternate gene names: 226222927

Gene position: 323693-324523 (Clockwise)

Preceding gene: 226222926

Following gene: 226222928

Centisome position: 11.11

GC content: 38.27

Gene sequence:

>831_bases
ATGTTCGCAAATAAAATTTTAACGGAAAAAGATACGGATCAAATCCGATTTAGTATATTAGCCAGTGGAAGCTCAGGGAA
TGCCACACTTGTCGAAACAGGAGACCAAAAAATTCTGATCGATTGTGGTTTGAGTGGAAAGAAAATGGAAGGATTATTCG
CGCAAGTTGGTCGTGATATGAACGATTTAGACGCGATTCTAATTACTCATGAACATTCAGATCATATTAAAGGTCTTGGT
GTGCTTGCTCGGAAATACAAACTCCCTATTTATGCTAACGCGAAAACGTGGAAAGCAATGGATAATATGATTGGCGAAGT
GTCTTCAGATCAAAAATTCCAATTTGATATGGAAACAGTAAAAACCTTTGGTAGCATGCAAGTGGAATCCTTTGGAGTCT
CTCATGATGCAATTGAGCCGATGTTTTACATATTTCATAAAGGGAATAAAAAATTTGTAATGATAACGGACACTGGTTAT
GTAAGCGACCGAATGAAAGGTCATATTGCGGGGGCTGATGCTTATCTTTTTGAAAGTAATCATGATGTAGAAATGCTTCG
AATGGGACGCTATCCGTGGAATGTAAAACGCAGAATTCTTGGTGACGAGGGACACGTGAGCAATGAGGACGCTGCAATAG
CAATGAGCGAAGTCATTACCGATCAAACAAAACGAATTTATTTGGGACACCTTAGTAAAGACAACAATATGAAAGAACTT
GCGAGAATGAGCGTAACACAAACACTTATGGCAGAAGGTATTGATGTTGGGGGTAAACTAGAAATTTTTGACACAGACCC
TGATAATGCTACATCTATCTTTACTATTTAA

Upstream 100 bases:

>100_bases
ATCATGAAAAATTAGGTTGGCTTTTTCAAACGATAGGGCATGCAATTTTGCCGAATTAGCGTTACAATGAAAGATATATA
AGCCTTTAGGGGGATAAAAA

Downstream 100 bases:

>100_bases
GTTTCACCGTTTTTTTAAAGCTTTTTCATCGTTTTTTCATATTTGGGGTTTATTATGGAAGTATATAAATGCGAAATTTG
CAGAGAGGAAGGAAGACATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MFANKILTEKDTDQIRFSILASGSSGNATLVETGDQKILIDCGLSGKKMEGLFAQVGRDMNDLDAILITHEHSDHIKGLG
VLARKYKLPIYANAKTWKAMDNMIGEVSSDQKFQFDMETVKTFGSMQVESFGVSHDAIEPMFYIFHKGNKKFVMITDTGY
VSDRMKGHIAGADAYLFESNHDVEMLRMGRYPWNVKRRILGDEGHVSNEDAAIAMSEVITDQTKRIYLGHLSKDNNMKEL
ARMSVTQTLMAEGIDVGGKLEIFDTDPDNATSIFTI

Sequences:

>Translated_276_residues
MFANKILTEKDTDQIRFSILASGSSGNATLVETGDQKILIDCGLSGKKMEGLFAQVGRDMNDLDAILITHEHSDHIKGLG
VLARKYKLPIYANAKTWKAMDNMIGEVSSDQKFQFDMETVKTFGSMQVESFGVSHDAIEPMFYIFHKGNKKFVMITDTGY
VSDRMKGHIAGADAYLFESNHDVEMLRMGRYPWNVKRRILGDEGHVSNEDAAIAMSEVITDQTKRIYLGHLSKDNNMKEL
ARMSVTQTLMAEGIDVGGKLEIFDTDPDNATSIFTI
>Mature_276_residues
MFANKILTEKDTDQIRFSILASGSSGNATLVETGDQKILIDCGLSGKKMEGLFAQVGRDMNDLDAILITHEHSDHIKGLG
VLARKYKLPIYANAKTWKAMDNMIGEVSSDQKFQFDMETVKTFGSMQVESFGVSHDAIEPMFYIFHKGNKKFVMITDTGY
VSDRMKGHIAGADAYLFESNHDVEMLRMGRYPWNVKRRILGDEGHVSNEDAAIAMSEVITDQTKRIYLGHLSKDNNMKEL
ARMSVTQTLMAEGIDVGGKLEIFDTDPDNATSIFTI

Specific function: Unknown

COG id: COG1235

COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily I

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 30823; Mature: 30823

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFANKILTEKDTDQIRFSILASGSSGNATLVETGDQKILIDCGLSGKKMEGLFAQVGRDM
CCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHCCCC
NDLDAILITHEHSDHIKGLGVLARKYKLPIYANAKTWKAMDNMIGEVSSDQKFQFDMETV
CCCEEEEEEECCCCHHHHHHHHHHHEECCEEECCHHHHHHHHHHHCCCCCCEEEEEHHHH
KTFGSMQVESFGVSHDAIEPMFYIFHKGNKKFVMITDTGYVSDRMKGHIAGADAYLFESN
HHHCCEEEECCCCCCHHHCCEEEEEECCCEEEEEEECCCCCCCCCCCEEECCEEEEEECC
HDVEMLRMGRYPWNVKRRILGDEGHVSNEDAAIAMSEVITDQTKRIYLGHLSKDNNMKEL
CCEEEEEECCCCCCHHHEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHH
ARMSVTQTLMAEGIDVGGKLEIFDTDPDNATSIFTI
HHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEC
>Mature Secondary Structure
MFANKILTEKDTDQIRFSILASGSSGNATLVETGDQKILIDCGLSGKKMEGLFAQVGRDM
CCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHCCCC
NDLDAILITHEHSDHIKGLGVLARKYKLPIYANAKTWKAMDNMIGEVSSDQKFQFDMETV
CCCEEEEEEECCCCHHHHHHHHHHHEECCEEECCHHHHHHHHHHHCCCCCCEEEEEHHHH
KTFGSMQVESFGVSHDAIEPMFYIFHKGNKKFVMITDTGYVSDRMKGHIAGADAYLFESN
HHHCCEEEECCCCCCHHHCCEEEEEECCCEEEEEEECCCCCCCCCCCEEECCEEEEEECC
HDVEMLRMGRYPWNVKRRILGDEGHVSNEDAAIAMSEVITDQTKRIYLGHLSKDNNMKEL
CCEEEEEECCCCCCHHHEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHH
ARMSVTQTLMAEGIDVGGKLEIFDTDPDNATSIFTI
HHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]