Click here to switch to the map view.

The map label for this gene is 226222678

Identifier: 226222678

GI number: 226222678

Start: 41796

End: 44198

Strand: Direct

Name: 226222678

Synonym: Lm4b_00042

Alternate gene names: NA

Gene position: 41796-44198 (Clockwise)

Preceding gene: 226222677

Following gene: 226222679

Centisome position: 1.43

GC content: 40.91

Gene sequence:

>2403_bases
ATGAAGCCAAGTATGAAACGACAAATTGCGCAAACTGGTATTATTCATCGACCACTCCCTATTGAAACCAAGCATGCGTT
AGAAACTTTAGCGAAAAAGAAACAAGTTTTATCAAGTAGGACTTTATTTAGCTCTAAACAACATGTTTCTTTAGAGTTTG
CACATCAAGGAGCAGGAGATTTTACTATTTCTGACCAAGATGAAATCAAGCTTTCTTCGCCTGTGGTTATGCCGCATTGG
CCCGCTGGTGCTCCGGATGACGGTGATTATACTAATTTTGGTAACGTTACCATATCGGCCCCGATTGAAAATGAGGACTG
GAGCGGCTTTAATCGTGTGCGAATCCAAGTTTTCCCTGATTTTCCTGGAGTAACAAATCCCTATTTAATGATTAGTTTTA
AAAACGACGGGAGCGTGAAAGTGCCTGATATATATGGGCGAGAAGGTGTTCACGGTGTGAATTTAATCAACCATGAATGG
AATGATGTCATTTTTGAAATTGAAGGTTTGCCGCGTGACCGAATGACCGAAATGAGTTTTAGTTATTACTTGAATGGCCC
AGAGCGATTGACTGCTGGAACGATGGAATTATTCATTAATGAAATTAAATTAGAACAAATCAGTGAGCCGGAAATCTCCA
AGGGTTGGATTCCGCAAGATAATACGCTAGTTTATTCGCATAACGGTTACTCTAAGGGCATGCCCAAAGTAGCGTTTTGC
GCCAACAAGTTTGCAGCGACTTCCTTTACAATTCACGACAAAGAAACAGACAAAGTTGTTTTTACTGGAAAAAGTTACCA
AAACGCAACAGAAACTGGCGATTTCATTATTCTTGATTTTTCTGATTTACAAACTGTGGGTGAATACTATTTAAAATTTG
CGGATATGCAAACGGAAATTTTTCAAATTGGGACTTCCGAAGTGATCTGGGAATCTTCTATCTGGAAATCGCTTAACTTT
ATTTTCTGCGAACGATGCGGTTGCCCGGTTTTTGGGAAACATACGACTTGTCACGCAGATATTATCGCTGAACACGATGG
GAAACAGTTGTCATTTAATGGTGGATGGCACGATGCGGGCGATGTTTCGCAGCAGCTCATTCAAACGGCGGAAGTAACGA
TGGCTTTATATGAAATGGCTTCGAGTTTACCTGAAAAAGAGGAAATGTTGCGGATGCGCCTTTTAGAAGAAGGCGAGTGG
GGACTAGATTTTATTTTGAAAACGCGCTTCGGAGACGGTTTTAGAGCGACTAGCGCAGGTATGACGAGATGGACGGATGG
GCTTGTTGGTGGGATGGATGATGCAATTGCGCGCGTTCATAACCAAGCTTATGAGAACTTTTATTGTGCTGGGATTGAAG
CGTATATTGGCAGCCAAATTGCGGATAATGCTACTATGCAGAATCATTTGCTGAGAATCGCGGAAGAGGATTTACTTTTT
GCGATAAAGGAACTGGAAAAACACGGAACGAGCCAAAAGCCGATTTTCTGGGAGCATACGTATCAAACCTCAGAAAGTCT
ATATTATGCGACTGCTTCTTGGGCAGCTTCGATGGTTTATCAACTAACAAACAAAGAAATATATGCAGAAAAAGCGGCCG
AATGGTTATATTTGATGCTAGAAGCGCAAGAAAAAGCTGGAATTAGAGACAGCGAAACTAGCGAACTTTACAAAGGATTT
TTCTACCGCGATAAAACGCACAAGGTCATTCAGCATTTTAATCATCAAGCACGCGAACATCTTTATTTACTGGCACTTGA
GGCGGCGCTTGAAACGCAACCGAGTAACGCTGAAAAACAAACTTGGCTACAAGCGGTCGAAATGTACGGCGACTATTTGA
AAAAAGTAACACGTTTCACTAAACCATATCCGCTTATTCCAGCAGGACTTTATAAAAAAGATGAGTATTTAGACGAAGCA
AGTTTCCACTTACAACATTTACTCATAGATGAACGGGCGATAGAAGAATACCAATTACAATTCGAGCAAGGTATCCAAAT
AAACGACGAGATAGCGTTGCGAAAATTCCCAATTTGGTTCTCGTTTAGAGGAAATAACGCTATTTTACTTTCGGCAGGAA
AAGCCGCATCGATTGCTGGAAAAATTTTGAAAGATAAGTCGCTTTTAGATATTGCGGAAGGTCAGTTACAGTGGGTAATT
GGAATGAACCCGTTTGGACAATCAATGATGCATGGCGAAGGTTATCGCTACGCACAGCAATACAGTGTACTAAATGGCGA
AATCACAGGAGAAATACCAGTCGGAATGGAAACTTTTAGAAATGAAGATGAACCATACTGGCCGGAGTTTAATAATGCAA
CTTATAAGGAAGTTTGGGTCGGTAATGCCGGCAAATGGATGTCAATTGTAGCAGATTTAAACAAAATAACAGGAAAGTCA
TAG

Upstream 100 bases:

>100_bases
TTACAAAAGGTGTTGTCCGCTCTAAGCTTGAGAAGGATAAGGTTGGCTTAATTGGTGCAGCCGTTATTGGAATGAGACTA
GGAAATGAAGGAGGAAAAGA

Downstream 100 bases:

>100_bases
GAGGACAAAAAAATGAGTTCAGAGAGAAGTTTATCTAGCCGATTTATTGAAGGATTATCAATTTTTGCCCAAAAAATTTC
ATCGCAAAAGCATATCATGG

Product: endoglucanase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 800; Mature: 800

Protein sequence:

>800_residues
MKPSMKRQIAQTGIIHRPLPIETKHALETLAKKKQVLSSRTLFSSKQHVSLEFAHQGAGDFTISDQDEIKLSSPVVMPHW
PAGAPDDGDYTNFGNVTISAPIENEDWSGFNRVRIQVFPDFPGVTNPYLMISFKNDGSVKVPDIYGREGVHGVNLINHEW
NDVIFEIEGLPRDRMTEMSFSYYLNGPERLTAGTMELFINEIKLEQISEPEISKGWIPQDNTLVYSHNGYSKGMPKVAFC
ANKFAATSFTIHDKETDKVVFTGKSYQNATETGDFIILDFSDLQTVGEYYLKFADMQTEIFQIGTSEVIWESSIWKSLNF
IFCERCGCPVFGKHTTCHADIIAEHDGKQLSFNGGWHDAGDVSQQLIQTAEVTMALYEMASSLPEKEEMLRMRLLEEGEW
GLDFILKTRFGDGFRATSAGMTRWTDGLVGGMDDAIARVHNQAYENFYCAGIEAYIGSQIADNATMQNHLLRIAEEDLLF
AIKELEKHGTSQKPIFWEHTYQTSESLYYATASWAASMVYQLTNKEIYAEKAAEWLYLMLEAQEKAGIRDSETSELYKGF
FYRDKTHKVIQHFNHQAREHLYLLALEAALETQPSNAEKQTWLQAVEMYGDYLKKVTRFTKPYPLIPAGLYKKDEYLDEA
SFHLQHLLIDERAIEEYQLQFEQGIQINDEIALRKFPIWFSFRGNNAILLSAGKAASIAGKILKDKSLLDIAEGQLQWVI
GMNPFGQSMMHGEGYRYAQQYSVLNGEITGEIPVGMETFRNEDEPYWPEFNNATYKEVWVGNAGKWMSIVADLNKITGKS

Sequences:

>Translated_800_residues
MKPSMKRQIAQTGIIHRPLPIETKHALETLAKKKQVLSSRTLFSSKQHVSLEFAHQGAGDFTISDQDEIKLSSPVVMPHW
PAGAPDDGDYTNFGNVTISAPIENEDWSGFNRVRIQVFPDFPGVTNPYLMISFKNDGSVKVPDIYGREGVHGVNLINHEW
NDVIFEIEGLPRDRMTEMSFSYYLNGPERLTAGTMELFINEIKLEQISEPEISKGWIPQDNTLVYSHNGYSKGMPKVAFC
ANKFAATSFTIHDKETDKVVFTGKSYQNATETGDFIILDFSDLQTVGEYYLKFADMQTEIFQIGTSEVIWESSIWKSLNF
IFCERCGCPVFGKHTTCHADIIAEHDGKQLSFNGGWHDAGDVSQQLIQTAEVTMALYEMASSLPEKEEMLRMRLLEEGEW
GLDFILKTRFGDGFRATSAGMTRWTDGLVGGMDDAIARVHNQAYENFYCAGIEAYIGSQIADNATMQNHLLRIAEEDLLF
AIKELEKHGTSQKPIFWEHTYQTSESLYYATASWAASMVYQLTNKEIYAEKAAEWLYLMLEAQEKAGIRDSETSELYKGF
FYRDKTHKVIQHFNHQAREHLYLLALEAALETQPSNAEKQTWLQAVEMYGDYLKKVTRFTKPYPLIPAGLYKKDEYLDEA
SFHLQHLLIDERAIEEYQLQFEQGIQINDEIALRKFPIWFSFRGNNAILLSAGKAASIAGKILKDKSLLDIAEGQLQWVI
GMNPFGQSMMHGEGYRYAQQYSVLNGEITGEIPVGMETFRNEDEPYWPEFNNATYKEVWVGNAGKWMSIVADLNKITGKS
>Mature_800_residues
MKPSMKRQIAQTGIIHRPLPIETKHALETLAKKKQVLSSRTLFSSKQHVSLEFAHQGAGDFTISDQDEIKLSSPVVMPHW
PAGAPDDGDYTNFGNVTISAPIENEDWSGFNRVRIQVFPDFPGVTNPYLMISFKNDGSVKVPDIYGREGVHGVNLINHEW
NDVIFEIEGLPRDRMTEMSFSYYLNGPERLTAGTMELFINEIKLEQISEPEISKGWIPQDNTLVYSHNGYSKGMPKVAFC
ANKFAATSFTIHDKETDKVVFTGKSYQNATETGDFIILDFSDLQTVGEYYLKFADMQTEIFQIGTSEVIWESSIWKSLNF
IFCERCGCPVFGKHTTCHADIIAEHDGKQLSFNGGWHDAGDVSQQLIQTAEVTMALYEMASSLPEKEEMLRMRLLEEGEW
GLDFILKTRFGDGFRATSAGMTRWTDGLVGGMDDAIARVHNQAYENFYCAGIEAYIGSQIADNATMQNHLLRIAEEDLLF
AIKELEKHGTSQKPIFWEHTYQTSESLYYATASWAASMVYQLTNKEIYAEKAAEWLYLMLEAQEKAGIRDSETSELYKGF
FYRDKTHKVIQHFNHQAREHLYLLALEAALETQPSNAEKQTWLQAVEMYGDYLKKVTRFTKPYPLIPAGLYKKDEYLDEA
SFHLQHLLIDERAIEEYQLQFEQGIQINDEIALRKFPIWFSFRGNNAILLSAGKAASIAGKILKDKSLLDIAEGQLQWVI
GMNPFGQSMMHGEGYRYAQQYSVLNGEITGEIPVGMETFRNEDEPYWPEFNNATYKEVWVGNAGKWMSIVADLNKITGKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 90957; Mature: 90957

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPSMKRQIAQTGIIHRPLPIETKHALETLAKKKQVLSSRTLFSSKQHVSLEFAHQGAGD
CCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC
FTISDQDEIKLSSPVVMPHWPAGAPDDGDYTNFGNVTISAPIENEDWSGFNRVRIQVFPD
CEECCCCCEEECCCEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEEECC
FPGVTNPYLMISFKNDGSVKVPDIYGREGVHGVNLINHEWNDVIFEIEGLPRDRMTEMSF
CCCCCCCEEEEEECCCCCEECCCCCCCCCCCCCEEECCCCCEEEEEECCCCHHHHHHCEE
SYYLNGPERLTAGTMELFINEIKLEQISEPEISKGWIPQDNTLVYSHNGYSKGMPKVAFC
EEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHH
ANKFAATSFTIHDKETDKVVFTGKSYQNATETGDFIILDFSDLQTVGEYYLKFADMQTEI
HCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHH
FQIGTSEVIWESSIWKSLNFIFCERCGCPVFGKHTTCHADIIAEHDGKQLSFNGGWHDAG
HHCCCCHHEECHHHHHHHHHHEEHHCCCCCCCCCCEEEEEEEECCCCCEEEECCCCCCHH
DVSQQLIQTAEVTMALYEMASSLPEKEEMLRMRLLEEGEWGLDFILKTRFGDGFRATSAG
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCC
MTRWTDGLVGGMDDAIARVHNQAYENFYCAGIEAYIGSQIADNATMQNHLLRIAEEDLLF
CHHHHCCCCCCHHHHHHHHHHHHHCCEEEECHHHHHCCHHHCCHHHHHHHHHHHHHHHHH
AIKELEKHGTSQKPIFWEHTYQTSESLYYATASWAASMVYQLTNKEIYAEKAAEWLYLML
HHHHHHHCCCCCCCEEEEECCCCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHEEEE
EAQEKAGIRDSETSELYKGFFYRDKTHKVIQHFNHQAREHLYLLALEAALETQPSNAEKQ
ECHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEEEEHHHCCCCCCCHHH
TWLQAVEMYGDYLKKVTRFTKPYPLIPAGLYKKDEYLDEASFHLQHLLIDERAIEEYQLQ
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FEQGIQINDEIALRKFPIWFSFRGNNAILLSAGKAASIAGKILKDKSLLDIAEGQLQWVI
HHCCCCCCCCEEEEEEEEEEEEECCCEEEEECCCHHHHHHHHHCCCCHHEECCCCEEEEE
GMNPFGQSMMHGEGYRYAQQYSVLNGEITGEIPVGMETFRNEDEPYWPEFNNATYKEVWV
ECCHHCHHHHCCCCCHHHHHHHHCCCEEEECCCCCHHHHCCCCCCCCCCCCCCEEEEEEE
GNAGKWMSIVADLNKITGKS
CCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKPSMKRQIAQTGIIHRPLPIETKHALETLAKKKQVLSSRTLFSSKQHVSLEFAHQGAGD
CCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC
FTISDQDEIKLSSPVVMPHWPAGAPDDGDYTNFGNVTISAPIENEDWSGFNRVRIQVFPD
CEECCCCCEEECCCEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEEECC
FPGVTNPYLMISFKNDGSVKVPDIYGREGVHGVNLINHEWNDVIFEIEGLPRDRMTEMSF
CCCCCCCEEEEEECCCCCEECCCCCCCCCCCCCEEECCCCCEEEEEECCCCHHHHHHCEE
SYYLNGPERLTAGTMELFINEIKLEQISEPEISKGWIPQDNTLVYSHNGYSKGMPKVAFC
EEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHH
ANKFAATSFTIHDKETDKVVFTGKSYQNATETGDFIILDFSDLQTVGEYYLKFADMQTEI
HCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHH
FQIGTSEVIWESSIWKSLNFIFCERCGCPVFGKHTTCHADIIAEHDGKQLSFNGGWHDAG
HHCCCCHHEECHHHHHHHHHHEEHHCCCCCCCCCCEEEEEEEECCCCCEEEECCCCCCHH
DVSQQLIQTAEVTMALYEMASSLPEKEEMLRMRLLEEGEWGLDFILKTRFGDGFRATSAG
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCC
MTRWTDGLVGGMDDAIARVHNQAYENFYCAGIEAYIGSQIADNATMQNHLLRIAEEDLLF
CHHHHCCCCCCHHHHHHHHHHHHHCCEEEECHHHHHCCHHHCCHHHHHHHHHHHHHHHHH
AIKELEKHGTSQKPIFWEHTYQTSESLYYATASWAASMVYQLTNKEIYAEKAAEWLYLML
HHHHHHHCCCCCCCEEEEECCCCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHEEEE
EAQEKAGIRDSETSELYKGFFYRDKTHKVIQHFNHQAREHLYLLALEAALETQPSNAEKQ
ECHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEEEEHHHCCCCCCCHHH
TWLQAVEMYGDYLKKVTRFTKPYPLIPAGLYKKDEYLDEASFHLQHLLIDERAIEEYQLQ
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FEQGIQINDEIALRKFPIWFSFRGNNAILLSAGKAASIAGKILKDKSLLDIAEGQLQWVI
HHCCCCCCCCEEEEEEEEEEEEECCCEEEEECCCHHHHHHHHHCCCCHHEECCCCEEEEE
GMNPFGQSMMHGEGYRYAQQYSVLNGEITGEIPVGMETFRNEDEPYWPEFNNATYKEVWV
ECCHHCHHHHCCCCCHHHHHHHHCCCEEEECCCCCHHHHCCCCCCCCCCCCCCEEEEEEE
GNAGKWMSIVADLNKITGKS
CCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA