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The map label for this gene is virB9 [H]

Identifier: 225685928

GI number: 225685928

Start: 59042

End: 59911

Strand: Reverse

Name: virB9 [H]

Synonym: BMEA_B0065

Alternate gene names: 225685928

Gene position: 59911-59042 (Counterclockwise)

Preceding gene: 225685929

Following gene: 225685927

Centisome position: 5.05

GC content: 57.59

Gene sequence:

>870_bases
ATGAAAAGATTCCTGCTTGCGTGCATACTGATCACGCTGGCCTCGCCCTCCTGGGCAACCAAAATCCCGTCCGGCTCAAA
ATACGACAGCCGAATTCAGTATGTCGATTACAATTCCGGCGATGTCGTGCTGGTTCGGGCCCTGCCCGGCGTTGGCGCAC
GCATCGTGTTTGCGCCGGGCGAGAATATTGAGGATGTCGCCTCAGGATTTACGCAAGGCTGGGAGTTCAAGGCGAGCCAC
AACATCCTGTATCTCAAGGCCCGCTCCATGACGCTCTCCCACTCGAACCAATCGATCGACATGGCCCCGGAACCGGGCAA
GTGGGACACAAACCTGATGGTCACGACAGATCAGCGCATGTACGATTTCGATTTGCGCTTGATGCCCGGCCGCAACAATC
AGCGTGTTGCCTATCGTGTTCAGTTCCGCTACCCGGCGGCAGCGGCAGCGGCGGCAGTAGCAGCCGCGCAAAAGCGAGTG
GTACAGGCCCGCATGAATGCCAGACCGTCGCCGGTAAACTGGAACTACACGATGCAGGTCGGCACTAATTCGGCCAGCAT
CGCGCCCACTCTTGCCTATGACGATGGGCGGTTCACATATTTGCGCTTTCCGAACAACAGAGACTTTCCGGCCGCTTTCC
TTGTCGCCGAAGACAAGTCGGAAAGCATCGTGAACAGCCATATAGACCCGTCAGCGCCGGACATTCTGGTCCTGCATCGG
GTCGCAAAGCAAATGGTGCTGCGCCTCGGTAACAAGGTGATTGGCATCTACAACGAATCCTTCAATCCTGATGGCGTTCC
CGCACGCGACGGAACCACAGTGCCAGGCGTCAAGCGCGTCATCAAATCGCCCGGGGAGAACCTGCAATGA

Upstream 100 bases:

>100_bases
ACGTCAATCCCTCTTTGATGTCGGAATCGGCCCGCCTGACAAACCCGCTGGGTTTCAATGTCACGAGCTATCGCGTTGAT
CCAGAAATGGGAGTGGTGCA

Downstream 100 bases:

>100_bases
CACAGGAAAACATTCCGGTGCAGCCGGGCACACTTGACGGTGAGCGTGGCCTACCCACCGTGAACGAAAACGGCTCCGGC
CGCACCCGCAAGGTGTTGCT

Product: P-type conjugative transfer protein VirB9

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MKRFLLACILITLASPSWATKIPSGSKYDSRIQYVDYNSGDVVLVRALPGVGARIVFAPGENIEDVASGFTQGWEFKASH
NILYLKARSMTLSHSNQSIDMAPEPGKWDTNLMVTTDQRMYDFDLRLMPGRNNQRVAYRVQFRYPAAAAAAAVAAAQKRV
VQARMNARPSPVNWNYTMQVGTNSASIAPTLAYDDGRFTYLRFPNNRDFPAAFLVAEDKSESIVNSHIDPSAPDILVLHR
VAKQMVLRLGNKVIGIYNESFNPDGVPARDGTTVPGVKRVIKSPGENLQ

Sequences:

>Translated_289_residues
MKRFLLACILITLASPSWATKIPSGSKYDSRIQYVDYNSGDVVLVRALPGVGARIVFAPGENIEDVASGFTQGWEFKASH
NILYLKARSMTLSHSNQSIDMAPEPGKWDTNLMVTTDQRMYDFDLRLMPGRNNQRVAYRVQFRYPAAAAAAAVAAAQKRV
VQARMNARPSPVNWNYTMQVGTNSASIAPTLAYDDGRFTYLRFPNNRDFPAAFLVAEDKSESIVNSHIDPSAPDILVLHR
VAKQMVLRLGNKVIGIYNESFNPDGVPARDGTTVPGVKRVIKSPGENLQ
>Mature_289_residues
MKRFLLACILITLASPSWATKIPSGSKYDSRIQYVDYNSGDVVLVRALPGVGARIVFAPGENIEDVASGFTQGWEFKASH
NILYLKARSMTLSHSNQSIDMAPEPGKWDTNLMVTTDQRMYDFDLRLMPGRNNQRVAYRVQFRYPAAAAAAAVAAAQKRV
VQARMNARPSPVNWNYTMQVGTNSASIAPTLAYDDGRFTYLRFPNNRDFPAAFLVAEDKSESIVNSHIDPSAPDILVLHR
VAKQMVLRLGNKVIGIYNESFNPDGVPARDGTTVPGVKRVIKSPGENLQ

Specific function: Unknown

COG id: COG3504

COG function: function code U; Type IV secretory pathway, VirB9 components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbG/virB9 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010258
- InterPro:   IPR014148 [H]

Pfam domain/function: PF03524 CagX [H]

EC number: NA

Molecular weight: Translated: 31952; Mature: 31952

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFLLACILITLASPSWATKIPSGSKYDSRIQYVDYNSGDVVLVRALPGVGARIVFAPG
CHHHHHHHHHHHHCCCCHHCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCEEEEECCC
ENIEDVASGFTQGWEFKASHNILYLKARSMTLSHSNQSIDMAPEPGKWDTNLMVTTDQRM
CCHHHHHHHHCCCEEEECCCCEEEEEEEEEEEECCCCEEECCCCCCCCCCEEEEEECCEE
YDFDLRLMPGRNNQRVAYRVQFRYPAAAAAAAVAAAQKRVVQARMNARPSPVNWNYTMQV
EEEEEEEECCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE
GTNSASIAPTLAYDDGRFTYLRFPNNRDFPAAFLVAEDKSESIVNSHIDPSAPDILVLHR
CCCCCCCCEEEEECCCCEEEEECCCCCCCCEEEEEECCCCCHHHHCCCCCCCCHHHHHHH
VAKQMVLRLGNKVIGIYNESFNPDGVPARDGTTVPGVKRVIKSPGENLQ
HHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKRFLLACILITLASPSWATKIPSGSKYDSRIQYVDYNSGDVVLVRALPGVGARIVFAPG
CHHHHHHHHHHHHCCCCHHCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCEEEEECCC
ENIEDVASGFTQGWEFKASHNILYLKARSMTLSHSNQSIDMAPEPGKWDTNLMVTTDQRM
CCHHHHHHHHCCCEEEECCCCEEEEEEEEEEEECCCCEEECCCCCCCCCCEEEEEECCEE
YDFDLRLMPGRNNQRVAYRVQFRYPAAAAAAAVAAAQKRVVQARMNARPSPVNWNYTMQV
EEEEEEEECCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE
GTNSASIAPTLAYDDGRFTYLRFPNNRDFPAAFLVAEDKSESIVNSHIDPSAPDILVLHR
CCCCCCCCEEEEECCCCEEEEECCCCCCCCEEEEEECCCCCHHHHCCCCCCCCHHHHHHH
VAKQMVLRLGNKVIGIYNESFNPDGVPARDGTTVPGVKRVIKSPGENLQ
HHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11756688 [H]