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The map label for this gene is virB10 [H]

Identifier: 225685927

GI number: 225685927

Start: 57894

End: 59045

Strand: Reverse

Name: virB10 [H]

Synonym: BMEA_B0064

Alternate gene names: 225685927

Gene position: 59045-57894 (Counterclockwise)

Preceding gene: 225685928

Following gene: 225685926

Centisome position: 4.98

GC content: 58.94

Gene sequence:

>1152_bases
ATGACACAGGAAAACATTCCGGTGCAGCCGGGCACACTTGACGGTGAGCGTGGCCTACCCACCGTGAACGAAAACGGCTC
CGGCCGCACCCGCAAGGTGTTGCTCTTTCTCTTTGTCGTGGGCTTCATCGTCGTGCTGCTGTTGCTGCTCGTGTTTCACA
TGAGGGGCAATGCAGAGAATAATCACCATTCAGACAAGACGATGGTGCAGACCAGCACAGTTCCGATGCGAACTTTCAAG
CTGCCACCCCCGCCACCCCCGCCACCCCCGCCACCACCAGAACCACCAGCCCCGCCACCGGCCCCAGCCATGCCCATCGC
GGAACCCGCAGCGGCGGCGCTGAGCCTGCCACCATTGCCGGATGATACGCCGGCAAAGGACGATGTACTGGACAAGTCGG
CCAGCGCGTTGATGGTCGTCACCAAGTCCAGCGGCGATACGGTCGTTCAAACGACCAATGCGCGCATTCAAGCCCTGCTC
GACAGTCAAAAGAACACCAAGCAGGATGCTGGATCGCTGGGTACTCTCCTTCACGGCACACAAACGGATGCACGCATGGC
GAGCCTTCTGCGCAACCGTGATTTCCTGCTCGCGAAGGGCAGCATCATCAATTGCGCGCTGCAAACCCGTCTGGATTCGA
CGGTGCCGGGCATGGCTGCCTGCGTGGTCACACGCAACATGTATAGCGATAACGGCAAGGTGTTGCTGATTGAGCGCGGT
TCAACCATCTCGGGTGAATATGATGCCAACGTAAAGCAGGGCATGGCTCGCATTTATGTCCTGTGGACGCGCGTGAAGAC
GCCGAACGGTGTCGTGATCGATCTCGACTCTCCAGGCGCCGACCCCCTGGGCGGGGCAGGCTTGCCCGGCTACATCGACT
CCCACTTCTGGAAGCGCTTTGGCGGCGCCTTGATGTTGAGCACGATCGAGACCCTCGGCCGCTATGCAACCCAGAAGGTC
GGCGGCGGGGGTTCAAATCAGATCAACCTCAATACCGGCGGAGGTGAATCGACGAGCAACCTGGCTTCAACTGCCTTGAA
GGATACGATCAACATTCCGCCGACACTGTACAAGAACCAGGGCGAAGAGATCGGCATCTATATCGCCCGCGACCTAGATT
TTTCGAGTGTGTATGATGTCAAACCGAAGTGA

Upstream 100 bases:

>100_bases
TCTACAACGAATCCTTCAATCCTGATGGCGTTCCCGCACGCGACGGAACCACAGTGCCAGGCGTCAAGCGCGTCATCAAA
TCGCCCGGGGAGAACCTGCA

Downstream 100 bases:

>100_bases
CTTTATTGTGCCTGACGAGGCGGCTGTCAAACGGGCGGCCTCGGTCAATTTCCATCTGGAACCGCTGCGCCCTTGGTTGG
ACGATCCGCAGATCACCGAA

Product: type IV secretion system protein virB10

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 382

Protein sequence:

>383_residues
MTQENIPVQPGTLDGERGLPTVNENGSGRTRKVLLFLFVVGFIVVLLLLLVFHMRGNAENNHHSDKTMVQTSTVPMRTFK
LPPPPPPPPPPPPEPPAPPPAPAMPIAEPAAAALSLPPLPDDTPAKDDVLDKSASALMVVTKSSGDTVVQTTNARIQALL
DSQKNTKQDAGSLGTLLHGTQTDARMASLLRNRDFLLAKGSIINCALQTRLDSTVPGMAACVVTRNMYSDNGKVLLIERG
STISGEYDANVKQGMARIYVLWTRVKTPNGVVIDLDSPGADPLGGAGLPGYIDSHFWKRFGGALMLSTIETLGRYATQKV
GGGGSNQINLNTGGGESTSNLASTALKDTINIPPTLYKNQGEEIGIYIARDLDFSSVYDVKPK

Sequences:

>Translated_383_residues
MTQENIPVQPGTLDGERGLPTVNENGSGRTRKVLLFLFVVGFIVVLLLLLVFHMRGNAENNHHSDKTMVQTSTVPMRTFK
LPPPPPPPPPPPPEPPAPPPAPAMPIAEPAAAALSLPPLPDDTPAKDDVLDKSASALMVVTKSSGDTVVQTTNARIQALL
DSQKNTKQDAGSLGTLLHGTQTDARMASLLRNRDFLLAKGSIINCALQTRLDSTVPGMAACVVTRNMYSDNGKVLLIERG
STISGEYDANVKQGMARIYVLWTRVKTPNGVVIDLDSPGADPLGGAGLPGYIDSHFWKRFGGALMLSTIETLGRYATQKV
GGGGSNQINLNTGGGESTSNLASTALKDTINIPPTLYKNQGEEIGIYIARDLDFSSVYDVKPK
>Mature_382_residues
TQENIPVQPGTLDGERGLPTVNENGSGRTRKVLLFLFVVGFIVVLLLLLVFHMRGNAENNHHSDKTMVQTSTVPMRTFKL
PPPPPPPPPPPPEPPAPPPAPAMPIAEPAAAALSLPPLPDDTPAKDDVLDKSASALMVVTKSSGDTVVQTTNARIQALLD
SQKNTKQDAGSLGTLLHGTQTDARMASLLRNRDFLLAKGSIINCALQTRLDSTVPGMAACVVTRNMYSDNGKVLLIERGS
TISGEYDANVKQGMARIYVLWTRVKTPNGVVIDLDSPGADPLGGAGLPGYIDSHFWKRFGGALMLSTIETLGRYATQKVG
GGGSNQINLNTGGGESTSNLASTALKDTINIPPTLYKNQGEEIGIYIARDLDFSSVYDVKPK

Specific function: The virB system could be required for the establishment of the replication niche in the host [H]

COG id: COG2948

COG function: function code U; Type IV secretory pathway, VirB10 components

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbI/virB10 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005498 [H]

Pfam domain/function: PF03743 TrbI [H]

EC number: NA

Molecular weight: Translated: 40752; Mature: 40621

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQENIPVQPGTLDGERGLPTVNENGSGRTRKVLLFLFVVGFIVVLLLLLVFHMRGNAEN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NHHSDKTMVQTSTVPMRTFKLPPPPPPPPPPPPEPPAPPPAPAMPIAEPAAAALSLPPLP
CCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEECCCCC
DDTPAKDDVLDKSASALMVVTKSSGDTVVQTTNARIQALLDSQKNTKQDAGSLGTLLHGT
CCCCCCHHHHCCCCCEEEEEEECCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHCCC
QTDARMASLLRNRDFLLAKGSIINCALQTRLDSTVPGMAACVVTRNMYSDNGKVLLIERG
CHHHHHHHHHHCCCEEEECCCEEEEHHHHHHCCCCCCCEEEEEECCEECCCCCEEEEECC
STISGEYDANVKQGMARIYVLWTRVKTPNGVVIDLDSPGADPLGGAGLPGYIDSHFWKRF
CCCCCCCCCHHHHHHEEEEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHH
GGALMLSTIETLGRYATQKVGGGGSNQINLNTGGGESTSNLASTALKDTINIPPTLYKNQ
CCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCHHCCCC
GEEIGIYIARDLDFSSVYDVKPK
CCEEEEEEEECCCCCCEECCCCC
>Mature Secondary Structure 
TQENIPVQPGTLDGERGLPTVNENGSGRTRKVLLFLFVVGFIVVLLLLLVFHMRGNAEN
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NHHSDKTMVQTSTVPMRTFKLPPPPPPPPPPPPEPPAPPPAPAMPIAEPAAAALSLPPLP
CCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEECCCCC
DDTPAKDDVLDKSASALMVVTKSSGDTVVQTTNARIQALLDSQKNTKQDAGSLGTLLHGT
CCCCCCHHHHCCCCCEEEEEEECCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHCCC
QTDARMASLLRNRDFLLAKGSIINCALQTRLDSTVPGMAACVVTRNMYSDNGKVLLIERG
CHHHHHHHHHHCCCEEEECCCEEEEHHHHHHCCCCCCCEEEEEECCEECCCCCEEEEECC
STISGEYDANVKQGMARIYVLWTRVKTPNGVVIDLDSPGADPLGGAGLPGYIDSHFWKRF
CCCCCCCCCHHHHHHEEEEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHH
GGALMLSTIETLGRYATQKVGGGGSNQINLNTGGGESTSNLASTALKDTINIPPTLYKNQ
CCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCHHCCCC
GEEIGIYIARDLDFSSVYDVKPK
CCEEEEEEEECCCCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11830669; 12271122 [H]