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The map label for this gene is yfiO [C]

Identifier: 225630083

GI number: 225630083

Start: 274002

End: 274655

Strand: Direct

Name: yfiO [C]

Synonym: WRi_002610

Alternate gene names: 225630083

Gene position: 274002-274655 (Clockwise)

Preceding gene: 225630081

Following gene: 225630084

Centisome position: 18.95

GC content: 33.03

Gene sequence:

>654_bases
ATGTATAAGACTTTAATCACGTGCTTTATTTTCCTAATTTGCTCCTTTACACAATCGTATGCGGATGATCTTGAAAAAAC
TGAAACTGAACTATATGAAGAAGCAGTTGAACTTTTTGACCAGAAAAAATATAAACAAGCTATTAGGGCATTTCATAAGA
TAGAGGATTTGTATCCTTTTTCTTATTGGGCAATGAAAGCAAAATTATTATCTGGGGTCTCTCACTATAATATGGGTAAC
TATAGCAGTGCTGCAAGTGATATGGATGATTATATATATGTTTATTCAAATGGTGAAGATTTACCATATGTATACTACTT
AAGAGTATTATCTTATTACATGCAAATTAATAAAGTGCAACTTGGACAGCAAACTGCATATAAAACTTTAGAGCTAGCCA
CTGAGTACATTAATCTCTTTCCAGGCAGCGAATATGTAGACGAGATAAAGGAAAGAGCAAAATTAATCACAGAACATATA
TCAACAAAAGAGTATTCTATCGGTAAATTTTACCTGAGGCGTGGTGAATATTTAGCAGCAATTAAGCGTTTCCAGAATAT
GGCAAGCTATAAGGATTCTAAATATTTTTCTAAGTCTATTAACTATTTAGTAGCAGCCCATTCAGCTCTTGGCCTTGACT
TAGAAGCTGAGTAG

Upstream 100 bases:

>100_bases
TGACCGTAGTTATAAAGAAGAAGGACCGGCTATTGCCTAAGAAATTTATTTATTTAAGTAATATTTAGGTCTATACTTTA
TTTTGATCGAAAAAAATCTT

Downstream 100 bases:

>100_bases
TATGAAAGTATGTTATTAGCAGAAAACCTGCAAGATGCCAAGCCAGAGGCTTGAAAATTTGCTTTAGCTTTTTCTATGCT
TTGATATATAATTAGGTTTT

Product: competence lipoprotein ComL, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MYKTLITCFIFLICSFTQSYADDLEKTETELYEEAVELFDQKKYKQAIRAFHKIEDLYPFSYWAMKAKLLSGVSHYNMGN
YSSAASDMDDYIYVYSNGEDLPYVYYLRVLSYYMQINKVQLGQQTAYKTLELATEYINLFPGSEYVDEIKERAKLITEHI
STKEYSIGKFYLRRGEYLAAIKRFQNMASYKDSKYFSKSINYLVAAHSALGLDLEAE

Sequences:

>Translated_217_residues
MYKTLITCFIFLICSFTQSYADDLEKTETELYEEAVELFDQKKYKQAIRAFHKIEDLYPFSYWAMKAKLLSGVSHYNMGN
YSSAASDMDDYIYVYSNGEDLPYVYYLRVLSYYMQINKVQLGQQTAYKTLELATEYINLFPGSEYVDEIKERAKLITEHI
STKEYSIGKFYLRRGEYLAAIKRFQNMASYKDSKYFSKSINYLVAAHSALGLDLEAE
>Mature_217_residues
MYKTLITCFIFLICSFTQSYADDLEKTETELYEEAVELFDQKKYKQAIRAFHKIEDLYPFSYWAMKAKLLSGVSHYNMGN
YSSAASDMDDYIYVYSNGEDLPYVYYLRVLSYYMQINKVQLGQQTAYKTLELATEYINLFPGSEYVDEIKERAKLITEHI
STKEYSIGKFYLRRGEYLAAIKRFQNMASYKDSKYFSKSINYLVAAHSALGLDLEAE

Specific function: Unknown

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788947, Length=223, Percent_Identity=20.1793721973094, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017689
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25428; Mature: 25428

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKTLITCFIFLICSFTQSYADDLEKTETELYEEAVELFDQKKYKQAIRAFHKIEDLYPF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
SYWAMKAKLLSGVSHYNMGNYSSAASDMDDYIYVYSNGEDLPYVYYLRVLSYYMQINKVQ
HHHHHHHHHHHHHHHCCCCCCHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
LGQQTAYKTLELATEYINLFPGSEYVDEIKERAKLITEHISTKEYSIGKFYLRRGEYLAA
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
IKRFQNMASYKDSKYFSKSINYLVAAHSALGLDLEAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MYKTLITCFIFLICSFTQSYADDLEKTETELYEEAVELFDQKKYKQAIRAFHKIEDLYPF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
SYWAMKAKLLSGVSHYNMGNYSSAASDMDDYIYVYSNGEDLPYVYYLRVLSYYMQINKVQ
HHHHHHHHHHHHHHHCCCCCCHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
LGQQTAYKTLELATEYINLFPGSEYVDEIKERAKLITEHISTKEYSIGKFYLRRGEYLAA
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
IKRFQNMASYKDSKYFSKSINYLVAAHSALGLDLEAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]