Definition | Wolbachia sp. wRi, complete genome. |
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Accession | NC_012416 |
Length | 1,445,873 |
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The map label for this gene is pgsA [H]
Identifier: 225630081
GI number: 225630081
Start: 270856
End: 271398
Strand: Direct
Name: pgsA [H]
Synonym: WRi_002580
Alternate gene names: 225630081
Gene position: 270856-271398 (Clockwise)
Preceding gene: 225630077
Following gene: 225630083
Centisome position: 18.73
GC content: 34.25
Gene sequence:
>543_bases ATGCTTAAGAAAAACGTGCCTAATTTGCTTACAATTTCTCGTGCGCTTGCAGTACCAGCAATAATATTAAGTTTTTATAT AGAAAATAAATATGCAGGCCTGATAACAATATCAATCTTTGTGTTTGCGTGCATTACGGATTTTTTTGATGGTTACTTGG CGCGTGCGTGGAAAGTCCAATCAAAATTTGGCAAGCTATTTGATCCAATTGCTGATAAATTAATAGTGGTTTCAACGATA ATTATGCTAGTTTATAAGCAGAAGATAAATGATTTTACAATAGTACCATCGATTATCATCATCTGTAGGGAGATATTAGT CTCGGGTTTGCGGGAGTTTTTGATAGCTACAAATGTTAGTCTACCTGTAAGCAAAGCTGGAAAAATTAAAACATTTTTGC AGATGGTTGCTGTAGTAGCGCTAATAATGAACGATTATTATATGATTCAATATACAGGTGCGATTTGTTTATGGGTTGCA GCTATTATAACTATGTGGTCAGGCTATAATTATATCCTAGCCGGCATCAAACAGATTGATTAA
Upstream 100 bases:
>100_bases AAGTATATGGAGTTTTTATAAATGTTCAATTGTAAACTATTAGCTTGTGAACTCTGGTGTACTTCTGTATAAGTTTACCT ACTACGTAGAATGGTATTAC
Downstream 100 bases:
>100_bases ATCTCCTAGGAAATAGTTAATAGACAAGAGTAGTTAATATCTTAGTGATATTGACTCAGAAAGCAAAAAGGTGTATAATT GTATTAACTTACAACTAATT
Product: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MLKKNVPNLLTISRALAVPAIILSFYIENKYAGLITISIFVFACITDFFDGYLARAWKVQSKFGKLFDPIADKLIVVSTI IMLVYKQKINDFTIVPSIIIICREILVSGLREFLIATNVSLPVSKAGKIKTFLQMVAVVALIMNDYYMIQYTGAICLWVA AIITMWSGYNYILAGIKQID
Sequences:
>Translated_180_residues MLKKNVPNLLTISRALAVPAIILSFYIENKYAGLITISIFVFACITDFFDGYLARAWKVQSKFGKLFDPIADKLIVVSTI IMLVYKQKINDFTIVPSIIIICREILVSGLREFLIATNVSLPVSKAGKIKTFLQMVAVVALIMNDYYMIQYTGAICLWVA AIITMWSGYNYILAGIKQID >Mature_180_residues MLKKNVPNLLTISRALAVPAIILSFYIENKYAGLITISIFVFACITDFFDGYLARAWKVQSKFGKLFDPIADKLIVVSTI IMLVYKQKINDFTIVPSIIIICREILVSGLREFLIATNVSLPVSKAGKIKTFLQMVAVVALIMNDYYMIQYTGAICLWVA AIITMWSGYNYILAGIKQID
Specific function: This protein catalyzes the committed step to the synthesis of the acidic phospholipids [H]
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Escherichia coli, GI1788220, Length=176, Percent_Identity=35.7954545454545, Blast_Score=122, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6320059, Length=104, Percent_Identity=35.5769230769231, Blast_Score=66, Evalue=3e-12, Organism=Drosophila melanogaster, GI24650130, Length=81, Percent_Identity=45.679012345679, Blast_Score=66, Evalue=1e-11, Organism=Drosophila melanogaster, GI24650126, Length=81, Percent_Identity=45.679012345679, Blast_Score=66, Evalue=1e-11, Organism=Drosophila melanogaster, GI24650128, Length=81, Percent_Identity=45.679012345679, Blast_Score=66, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000462 - InterPro: IPR004570 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.5 [H]
Molecular weight: Translated: 20203; Mature: 20203
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKKNVPNLLTISRALAVPAIILSFYIENKYAGLITISIFVFACITDFFDGYLARAWKVQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKFGKLFDPIADKLIVVSTIIMLVYKQKINDFTIVPSIIIICREILVSGLREFLIATNVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LPVSKAGKIKTFLQMVAVVALIMNDYYMIQYTGAICLWVAAIITMWSGYNYILAGIKQID CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHCC >Mature Secondary Structure MLKKNVPNLLTISRALAVPAIILSFYIENKYAGLITISIFVFACITDFFDGYLARAWKVQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKFGKLFDPIADKLIVVSTIIMLVYKQKINDFTIVPSIIIICREILVSGLREFLIATNVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LPVSKAGKIKTFLQMVAVVALIMNDYYMIQYTGAICLWVAAIITMWSGYNYILAGIKQID CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA