Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is 222527384
Identifier: 222527384
GI number: 222527384
Start: 5171751
End: 5173130
Strand: Direct
Name: 222527384
Synonym: Chy400_4174
Alternate gene names: NA
Gene position: 5171751-5173130 (Clockwise)
Preceding gene: 222527383
Following gene: 222527385
Centisome position: 98.16
GC content: 53.99
Gene sequence:
>1380_bases GTGAATAAACTGCTTTTCTGGAATTTGCTGCTAGGGATCGCGTTATTGGTCACGGCGTGTTATGCACCGAATGAACAACG TCCAGTGCCAACGGCCAATCTCACGATCCCATCAACCACTGCCGTATCTGTGCCGGAACCAACAATGCCTGCCCCAGCGC CAACGCCGACACCGGTGAATGATGAGGCGATCATCGCCTACGAGATGCAAGCAGCCTTCAGGTTTTTCTGGGAACAGGCA AACACCAACCCGGACAGTCCGGGGTATGGTTTGATCCGGGATCGCTATCCGGGATCGGCAGGCATCGCCAGCATTGCCGC GGTTGGGTTCGGCCTGAGTGCCATCATTGTCGGCGTCGAACGAGGGTATATCAGCTACGATCAGGGCTACGAGCGGGTGT TGGGCACATTACAGACCCTTACTCGTATGGAGCGCGAGCAGGGTTTCTTCTACCACTTTGTTGACATGGAAAGTGGAAAA CGGGCCTGGCAGAGCGAGGTCTCAAGTATTGATACCGCCATCTTAATGATGGGTGTATTATCGGTCGGTCAATACTTTGG GCATGATGTACAACAACTAGCCGACGAACTCTACGCCGGAGTAAACTGGGGCTGGTTCCTCGATCCTGACCGACAAATGT TTTACATGGCCTATCGGCCGGAAGAGGGTTTCAGCGGCCACTGGGATTTCTACGCCGAACAACTGATGCTCTACGTCCTG GCTGCCGGATCACCAACCTACCCGGTTGATGAGCGCCCGTATTACAGCTTCATCCGCCATGTTGGTCGTTACGGCAATGG TGAACCGTTCATTCATTCGTGGTTCGGCTCACTGTTTACGTATCAATTCAGTCACGCCTGGATCGACTTCCGCAATCGGA TCGATGCAAAGGGAGTCGATTGGTTTGCCAATTCGGTCGCCGCTTCACGTGCGCATTACGATTTTGCCGTCGCAATGGAT GCGAAATACACCACGCTTGGCCCGAACGCCTGGGGACTGACCGCGTGTGACGGGCCGAATGGTTATGAAGGACGCTACGG GGCACCACCGTCAGGGTACGACAACCGGGCACATCTGATCGACGACACCGTGCCACCGGCGGGGGCGATTGGTTCGATCA TCTTTACTCCCGACGAATCGTTACAGGCAATGCGCTACTACTACTCGTTAGAACCCTTAAAAGGTGTGTATGGCTTCAAC GATGCGTTCAACCTCAGCCGCAACTGGTATGCCACCGATGTTATCGGTATCGATAAAGGAATTTCACTGTTGATGCTGGC GAATTATCAAGACGGCTTAATCCACCGCATCACGATGGCTCATCCTGCTATTCTGGCCGGACTAGAGCGACTTGGGATCG AACAGCTTCAGGAGGAGTAA
Upstream 100 bases:
>100_bases AAAATGAGTGGTACATTTCTGACCATTTTGCCACTGCTGATTCTGTACTTTATCTTGCAACGTTGGTTTGTCGAATCGAT TGAACGATCAGGACTGGCCG
Downstream 100 bases:
>100_bases TGCCCACGATTAAAGATGTTGCACGTCGTGCCGGCGTTAGTGTAACGGCAGCCTCATATGCGCTTAACCGTACCGGGACG ATTAGTGAAGAGACACGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 459; Mature: 459
Protein sequence:
>459_residues MNKLLFWNLLLGIALLVTACYAPNEQRPVPTANLTIPSTTAVSVPEPTMPAPAPTPTPVNDEAIIAYEMQAAFRFFWEQA NTNPDSPGYGLIRDRYPGSAGIASIAAVGFGLSAIIVGVERGYISYDQGYERVLGTLQTLTRMEREQGFFYHFVDMESGK RAWQSEVSSIDTAILMMGVLSVGQYFGHDVQQLADELYAGVNWGWFLDPDRQMFYMAYRPEEGFSGHWDFYAEQLMLYVL AAGSPTYPVDERPYYSFIRHVGRYGNGEPFIHSWFGSLFTYQFSHAWIDFRNRIDAKGVDWFANSVAASRAHYDFAVAMD AKYTTLGPNAWGLTACDGPNGYEGRYGAPPSGYDNRAHLIDDTVPPAGAIGSIIFTPDESLQAMRYYYSLEPLKGVYGFN DAFNLSRNWYATDVIGIDKGISLLMLANYQDGLIHRITMAHPAILAGLERLGIEQLQEE
Sequences:
>Translated_459_residues MNKLLFWNLLLGIALLVTACYAPNEQRPVPTANLTIPSTTAVSVPEPTMPAPAPTPTPVNDEAIIAYEMQAAFRFFWEQA NTNPDSPGYGLIRDRYPGSAGIASIAAVGFGLSAIIVGVERGYISYDQGYERVLGTLQTLTRMEREQGFFYHFVDMESGK RAWQSEVSSIDTAILMMGVLSVGQYFGHDVQQLADELYAGVNWGWFLDPDRQMFYMAYRPEEGFSGHWDFYAEQLMLYVL AAGSPTYPVDERPYYSFIRHVGRYGNGEPFIHSWFGSLFTYQFSHAWIDFRNRIDAKGVDWFANSVAASRAHYDFAVAMD AKYTTLGPNAWGLTACDGPNGYEGRYGAPPSGYDNRAHLIDDTVPPAGAIGSIIFTPDESLQAMRYYYSLEPLKGVYGFN DAFNLSRNWYATDVIGIDKGISLLMLANYQDGLIHRITMAHPAILAGLERLGIEQLQEE >Mature_459_residues MNKLLFWNLLLGIALLVTACYAPNEQRPVPTANLTIPSTTAVSVPEPTMPAPAPTPTPVNDEAIIAYEMQAAFRFFWEQA NTNPDSPGYGLIRDRYPGSAGIASIAAVGFGLSAIIVGVERGYISYDQGYERVLGTLQTLTRMEREQGFFYHFVDMESGK RAWQSEVSSIDTAILMMGVLSVGQYFGHDVQQLADELYAGVNWGWFLDPDRQMFYMAYRPEEGFSGHWDFYAEQLMLYVL AAGSPTYPVDERPYYSFIRHVGRYGNGEPFIHSWFGSLFTYQFSHAWIDFRNRIDAKGVDWFANSVAASRAHYDFAVAMD AKYTTLGPNAWGLTACDGPNGYEGRYGAPPSGYDNRAHLIDDTVPPAGAIGSIIFTPDESLQAMRYYYSLEPLKGVYGFN DAFNLSRNWYATDVIGIDKGISLLMLANYQDGLIHRITMAHPAILAGLERLGIEQLQEE
Specific function: Unknown
COG id: COG5368
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51256; Mature: 51256
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLLFWNLLLGIALLVTACYAPNEQRPVPTANLTIPSTTAVSVPEPTMPAPAPTPTPVN CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEECCCCCCCCCCCCCCCCCC DEAIIAYEMQAAFRFFWEQANTNPDSPGYGLIRDRYPGSAGIASIAAVGFGLSAIIVGVE CCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCHHHHHHHHHHCHHHEEEEHH RGYISYDQGYERVLGTLQTLTRMEREQGFFYHFVDMESGKRAWQSEVSSIDTAILMMGVL CCEECCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH SVGQYFGHDVQQLADELYAGVNWGWFLDPDRQMFYMAYRPEEGFSGHWDFYAEQLMLYVL HHHHHHCHHHHHHHHHHHHCCCCCEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHH AAGSPTYPVDERPYYSFIRHVGRYGNGEPFIHSWFGSLFTYQFSHAWIDFRNRIDAKGVD CCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH WFANSVAASRAHYDFAVAMDAKYTTLGPNAWGLTACDGPNGYEGRYGAPPSGYDNRAHLI HHHHHHHHHHCCCEEEEEECCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEE DDTVPPAGAIGSIIFTPDESLQAMRYYYSLEPLKGVYGFNDAFNLSRNWYATDVIGIDKG CCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCC ISLLMLANYQDGLIHRITMAHPAILAGLERLGIEQLQEE CEEEEEECCCCCCEEEHHHHHHHHHHHHHHHCHHHHHCC >Mature Secondary Structure MNKLLFWNLLLGIALLVTACYAPNEQRPVPTANLTIPSTTAVSVPEPTMPAPAPTPTPVN CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEECCCCCCCCCCCCCCCCCC DEAIIAYEMQAAFRFFWEQANTNPDSPGYGLIRDRYPGSAGIASIAAVGFGLSAIIVGVE CCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCHHHHHHHHHHCHHHEEEEHH RGYISYDQGYERVLGTLQTLTRMEREQGFFYHFVDMESGKRAWQSEVSSIDTAILMMGVL CCEECCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH SVGQYFGHDVQQLADELYAGVNWGWFLDPDRQMFYMAYRPEEGFSGHWDFYAEQLMLYVL HHHHHHCHHHHHHHHHHHHCCCCCEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHH AAGSPTYPVDERPYYSFIRHVGRYGNGEPFIHSWFGSLFTYQFSHAWIDFRNRIDAKGVD CCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH WFANSVAASRAHYDFAVAMDAKYTTLGPNAWGLTACDGPNGYEGRYGAPPSGYDNRAHLI HHHHHHHHHHCCCEEEEEECCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEE DDTVPPAGAIGSIIFTPDESLQAMRYYYSLEPLKGVYGFNDAFNLSRNWYATDVIGIDKG CCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCC ISLLMLANYQDGLIHRITMAHPAILAGLERLGIEQLQEE CEEEEEECCCCCCEEEHHHHHHHHHHHHHHHCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA