Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is 222527377
Identifier: 222527377
GI number: 222527377
Start: 5161067
End: 5163907
Strand: Direct
Name: 222527377
Synonym: Chy400_4167
Alternate gene names: NA
Gene position: 5161067-5163907 (Clockwise)
Preceding gene: 222527376
Following gene: 222527378
Centisome position: 97.95
GC content: 53.29
Gene sequence:
>2841_bases ATGAACGCTCATCTCATGCTGCGAACAATCCAGATCATACTGGTGGTTGGACTTATCGGGTCACTGAACCCGGCGCTAGT TTGGGCCGATAGCGGACTGCGAGCACCCATCGAGGTGCGTGCCAGCACTTTCGGGTATCCAACGGGCACACATCCGCTCG CCGCACACTATCCGAAGCCCAGTGTTGCCTTGCAAAACGGTGATCAGATATCGTTCACCGTTGATATACCCCAGGCCGGG GAATATACGCTGGCAATCGACGCGGTGGTGCCTGAAGAGGTTATGTTCCTGCCACCAGAAGCCCTCGTCCAGATTGATGG GCACGCTGAACACTGGCGCCTGATCTTCCCGCTCTTTTACCAGGATACCGTCGATACATTTCCGGTTGATCGTTACGGTA ACGAAACGCTAATCCCACAAGCCCGATTGACGCGCTGGAGTCAGGTTTTCCTGCGCGATGTCAGTTTCAGCCAACCGTAC CCGACCGTTATCTCGCTACCGGCAGGCCAACAACGGTTTCGGTTATCGATCCACGAAGCACCGGTGGTTATTGGCAGTAT CTACCTGATTCCGGCTACTCGTTACCCAGGCTACGTTGAATATCAGCGCGAACGACAGGCAGCGGCTACCACAGGCGTAC TCATCGAACTTGAGGCAGAAAAACCGAGCTACAAAAATGACACCGCTATCCGTCCGATCAGCCGGCAAAACCTGGAGGTA ACACCCTATGATCCGTACCGCTCCCGATTAAATGTGATTGGGGGTGAGAGCTGGGATCAGAGTGGCACAACCGTCTATTA TGAGTTTACCGTCCCTCAAGATGGCTGGTACAACATTACCTTACGTGCGATCCAGGATTATAAGAACAACTTTACCGTTT ATCGCCGCATCCTCATCGATGATCGCGTGCTGTTTGCAGAACTAAACGCGGTGCCCTTCAATTACGATCCGGTCTGGCGC AACTACACGCTCGGTGGTGAAACACCCTACCAGATTTATCTCACACGTGGCAGCCATGTACTTGGGATCGAAGCGACAAC TGCCCCATACCACGACTCGATTCAGCGGGTGCGGGTCGGGTTAAGAGCCATCGCCGATATTGCCTTTGAAATCAAACGGC TCACCGGCAACCAGATCGACATCTACAAAGAGTGGGAGATTGCTGACTACATCCCTGATATTCGCGAACGATTGCTTACG CTGGCCGATCAATTGCGTGCCGACCAGCAAACCCTGCTGGCCGTCAATCAGACGCCGGCTTCACCGGAAGTGCTTGCCTA TCAGATGGCAATCGACAATCTCATGATCCTTGCCCAAGACCCCAACCGGATTCCGGTACGCATGAGCCGTCTCTCGGAAG GGGCCGGTTCGGCAGCCCAACTACTGGGCAGCATTCTGCCCTCATTGCAGAGCCAGCCATTGGCGATTGACAAAATCTAC ATCCATTCGCCTGACATAATTCCGCCCGAACCCACAATTTCGGTTAGCGCTATCGCTTTTGACTGGATGCAACGTTTTAT TGCCTCTTTCCGCAGCGATCCCTATCAGAGCATCGGTGCTGCACCTGATGAACTAGAGGTTTGGGTCAATCGTCCACAAC AATACGTCAACCTGCTTCAGCAACTCACCGACAAGTACTTTACTCCGCAGACCGGCATCAAGGTGAAATTCTCGATCATG CCAAACGAGTCAAAACTCGTGCTGGCCTGTGCCGCCGGTACCCAACCCGACATCGCCCTCGGTGTCAGCACCAATATTCC CTACGAGCTGGCAATCCGCAATGCCCTGTACGATCTGCGCCAGTTTCCCGATTTTGATCGCTTCATCCGCATCTACGCGC CCGGTTCATTGCTCAGCTACATCATCGATCAGTCGGTCTACGCCATCCCGGAAACGCAGGATTTCTGGGTAACGTATTAC CGCAAAGATGTGCTCGAACGTCTTGGGTTGCCGGTACCGCAAACGTGGGATGAGGTACTTGAGATTCTGCCCGAATTGCA GCGGTATGGGATGAACTACAACACTGCCCTGTCGAGCGGTAGCGGTTTGAAGGGGTATCTGGTGACTGCCCCCTATCTTT TGAACCACGGAGCCTCGCTCTACACCCAGGAAGGATTGTCAGGACTGGGAACCGATGAAGCGATCCGGGCTATTCGCTTC ATGGCCGAGAGCTTTACGATCTACGGCATGCCGCTGACAACATCCAGCTTCTACGAGAGTTTTCGGTCTGGCGAATTACC AATTGGTATCTCCAATTTTGAAACCTACCTCAAACTACTCACCGCTGCACCTGAAATTGATGGCCTGTGGGATATTGCGC TGTATCCGGCAACTGTGTTGCCGGATGGCCGTCAGCTTCGCTACGCCACCGGATCGGCTCAGGCAGCCATGATGTTTGCC AACACCGATAAAGCGACAGAGGGTTGGACATTTCTCAAATGGTGGATGTCCACCGAAACGCAGGTCATGTTCCAGCAAGA ACTCATCATGAACTACGGGCTTGAATACCTGTGGAATCCGGCAAACCTGGAAGCCTTCCGCTTCACGCCAATTCCCTCTG CCCATCGCGACATCATCTTGCAGCAGTGGCAATGGCTCCAGGAACCGGTAAAGTTACCGGGCAGTTATATGCAAGAGCGA GAGTTGAGCAACGTCTGGAATCGAATTGTCTTCGACGGTGCCAATCCACGAGCAGCGATTGATAATGCAGTAACTGTCAT TAATCGCGAAATTGTGCGCAAAATGACCGAGTTCGGCTACATTCGCAATGGCGAACGGGTGCGCACCTTCACTATTCCAA CCATCGATCTGGTAAAGGAGTGGATGGACAATGCGCAATGA
Upstream 100 bases:
>100_bases GGCATTGAAGTAGTCAGGATCACGTAAGGTGAGGGTACTATTGTGCCCTCACCTTATCACAGAGCAGACAGACGCTCAAG CCATGGTATCGCGAGGCACC
Downstream 100 bases:
>100_bases CCGGCAGACAACATGGAGCCGCTGGTGGTACAGGGAAGCCAGCGCCTACGGCTTCGTCGCACCGTATGCGTTGCTCTTCG CCATCTTTATCGCCATTCCG
Product: family 1 extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 946; Mature: 946
Protein sequence:
>946_residues MNAHLMLRTIQIILVVGLIGSLNPALVWADSGLRAPIEVRASTFGYPTGTHPLAAHYPKPSVALQNGDQISFTVDIPQAG EYTLAIDAVVPEEVMFLPPEALVQIDGHAEHWRLIFPLFYQDTVDTFPVDRYGNETLIPQARLTRWSQVFLRDVSFSQPY PTVISLPAGQQRFRLSIHEAPVVIGSIYLIPATRYPGYVEYQRERQAAATTGVLIELEAEKPSYKNDTAIRPISRQNLEV TPYDPYRSRLNVIGGESWDQSGTTVYYEFTVPQDGWYNITLRAIQDYKNNFTVYRRILIDDRVLFAELNAVPFNYDPVWR NYTLGGETPYQIYLTRGSHVLGIEATTAPYHDSIQRVRVGLRAIADIAFEIKRLTGNQIDIYKEWEIADYIPDIRERLLT LADQLRADQQTLLAVNQTPASPEVLAYQMAIDNLMILAQDPNRIPVRMSRLSEGAGSAAQLLGSILPSLQSQPLAIDKIY IHSPDIIPPEPTISVSAIAFDWMQRFIASFRSDPYQSIGAAPDELEVWVNRPQQYVNLLQQLTDKYFTPQTGIKVKFSIM PNESKLVLACAAGTQPDIALGVSTNIPYELAIRNALYDLRQFPDFDRFIRIYAPGSLLSYIIDQSVYAIPETQDFWVTYY RKDVLERLGLPVPQTWDEVLEILPELQRYGMNYNTALSSGSGLKGYLVTAPYLLNHGASLYTQEGLSGLGTDEAIRAIRF MAESFTIYGMPLTTSSFYESFRSGELPIGISNFETYLKLLTAAPEIDGLWDIALYPATVLPDGRQLRYATGSAQAAMMFA NTDKATEGWTFLKWWMSTETQVMFQQELIMNYGLEYLWNPANLEAFRFTPIPSAHRDIILQQWQWLQEPVKLPGSYMQER ELSNVWNRIVFDGANPRAAIDNAVTVINREIVRKMTEFGYIRNGERVRTFTIPTIDLVKEWMDNAQ
Sequences:
>Translated_946_residues MNAHLMLRTIQIILVVGLIGSLNPALVWADSGLRAPIEVRASTFGYPTGTHPLAAHYPKPSVALQNGDQISFTVDIPQAG EYTLAIDAVVPEEVMFLPPEALVQIDGHAEHWRLIFPLFYQDTVDTFPVDRYGNETLIPQARLTRWSQVFLRDVSFSQPY PTVISLPAGQQRFRLSIHEAPVVIGSIYLIPATRYPGYVEYQRERQAAATTGVLIELEAEKPSYKNDTAIRPISRQNLEV TPYDPYRSRLNVIGGESWDQSGTTVYYEFTVPQDGWYNITLRAIQDYKNNFTVYRRILIDDRVLFAELNAVPFNYDPVWR NYTLGGETPYQIYLTRGSHVLGIEATTAPYHDSIQRVRVGLRAIADIAFEIKRLTGNQIDIYKEWEIADYIPDIRERLLT LADQLRADQQTLLAVNQTPASPEVLAYQMAIDNLMILAQDPNRIPVRMSRLSEGAGSAAQLLGSILPSLQSQPLAIDKIY IHSPDIIPPEPTISVSAIAFDWMQRFIASFRSDPYQSIGAAPDELEVWVNRPQQYVNLLQQLTDKYFTPQTGIKVKFSIM PNESKLVLACAAGTQPDIALGVSTNIPYELAIRNALYDLRQFPDFDRFIRIYAPGSLLSYIIDQSVYAIPETQDFWVTYY RKDVLERLGLPVPQTWDEVLEILPELQRYGMNYNTALSSGSGLKGYLVTAPYLLNHGASLYTQEGLSGLGTDEAIRAIRF MAESFTIYGMPLTTSSFYESFRSGELPIGISNFETYLKLLTAAPEIDGLWDIALYPATVLPDGRQLRYATGSAQAAMMFA NTDKATEGWTFLKWWMSTETQVMFQQELIMNYGLEYLWNPANLEAFRFTPIPSAHRDIILQQWQWLQEPVKLPGSYMQER ELSNVWNRIVFDGANPRAAIDNAVTVINREIVRKMTEFGYIRNGERVRTFTIPTIDLVKEWMDNAQ >Mature_946_residues MNAHLMLRTIQIILVVGLIGSLNPALVWADSGLRAPIEVRASTFGYPTGTHPLAAHYPKPSVALQNGDQISFTVDIPQAG EYTLAIDAVVPEEVMFLPPEALVQIDGHAEHWRLIFPLFYQDTVDTFPVDRYGNETLIPQARLTRWSQVFLRDVSFSQPY PTVISLPAGQQRFRLSIHEAPVVIGSIYLIPATRYPGYVEYQRERQAAATTGVLIELEAEKPSYKNDTAIRPISRQNLEV TPYDPYRSRLNVIGGESWDQSGTTVYYEFTVPQDGWYNITLRAIQDYKNNFTVYRRILIDDRVLFAELNAVPFNYDPVWR NYTLGGETPYQIYLTRGSHVLGIEATTAPYHDSIQRVRVGLRAIADIAFEIKRLTGNQIDIYKEWEIADYIPDIRERLLT LADQLRADQQTLLAVNQTPASPEVLAYQMAIDNLMILAQDPNRIPVRMSRLSEGAGSAAQLLGSILPSLQSQPLAIDKIY IHSPDIIPPEPTISVSAIAFDWMQRFIASFRSDPYQSIGAAPDELEVWVNRPQQYVNLLQQLTDKYFTPQTGIKVKFSIM PNESKLVLACAAGTQPDIALGVSTNIPYELAIRNALYDLRQFPDFDRFIRIYAPGSLLSYIIDQSVYAIPETQDFWVTYY RKDVLERLGLPVPQTWDEVLEILPELQRYGMNYNTALSSGSGLKGYLVTAPYLLNHGASLYTQEGLSGLGTDEAIRAIRF MAESFTIYGMPLTTSSFYESFRSGELPIGISNFETYLKLLTAAPEIDGLWDIALYPATVLPDGRQLRYATGSAQAAMMFA NTDKATEGWTFLKWWMSTETQVMFQQELIMNYGLEYLWNPANLEAFRFTPIPSAHRDIILQQWQWLQEPVKLPGSYMQER ELSNVWNRIVFDGANPRAAIDNAVTVINREIVRKMTEFGYIRNGERVRTFTIPTIDLVKEWMDNAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 107295; Mature: 107295
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAHLMLRTIQIILVVGLIGSLNPALVWADSGLRAPIEVRASTFGYPTGTHPLAAHYPKP CCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCEECCCCC SVALQNGDQISFTVDIPQAGEYTLAIDAVVPEEVMFLPPEALVQIDGHAEHWRLIFPLFY CEEECCCCEEEEEEECCCCCCEEEEEEEECCCCEEECCCHHEEEECCCCCCEEEEEEEHC QDTVDTFPVDRYGNETLIPQARLTRWSQVFLRDVSFSQPYPTVISLPAGQQRFRLSIHEA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEEEECCC PVVIGSIYLIPATRYPGYVEYQRERQAAATTGVLIELEAEKPSYKNDTAIRPISRQNLEV CEEEEEEEEEECCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCEE TPYDPYRSRLNVIGGESWDQSGTTVYYEFTVPQDGWYNITLRAIQDYKNNFTVYRRILID CCCCHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEHHHHCCCEEEEEEHHC DRVLFAELNAVPFNYDPVWRNYTLGGETPYQIYLTRGSHVLGIEATTAPYHDSIQRVRVG CEEEEEEECCCCCCCCCCCCEEECCCCCCEEEEEECCCEEEEEEECCCCCHHHHHHHHHH LRAIADIAFEIKRLTGNQIDIYKEWEIADYIPDIRERLLTLADQLRADQQTLLAVNQTPA HHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC SPEVLAYQMAIDNLMILAQDPNRIPVRMSRLSEGAGSAAQLLGSILPSLQSQPLAIDKIY CHHHEEEEEECCCEEEEEECCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEE IHSPDIIPPEPTISVSAIAFDWMQRFIASFRSDPYQSIGAAPDELEVWVNRPQQYVNLLQ EECCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHCCCHHHHHHHH QLTDKYFTPQTGIKVKFSIMPNESKLVLACAAGTQPDIALGVSTNIPYELAIRNALYDLR HHHHHCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHH QFPDFDRFIRIYAPGSLLSYIIDQSVYAIPETQDFWVTYYRKDVLERLGLPVPQTWDEVL HCCCHHHEEEEEECHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHH EILPELQRYGMNYNTALSSGSGLKGYLVTAPYLLNHGASLYTQEGLSGLGTDEAIRAIRF HHHHHHHHCCCCCCCCCCCCCCCCEEEEECCHHHHCCCHHHHHHCCCCCCHHHHHHHHHH MAESFTIYGMPLTTSSFYESFRSGELPIGISNFETYLKLLTAAPEIDGLWDIALYPATVL HHHCEEEEEECCCCHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCCCCCEEEEEECCEEEC PDGRQLRYATGSAQAAMMFANTDKATEGWTFLKWWMSTETQVMFQQELIMNYGLEYLWNP CCCCEEEEECCCCCEEEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCHHHEECC ANLEAFRFTPIPSAHRDIILQQWQWLQEPVKLPGSYMQERELSNVWNRIVFDGANPRAAI CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEECCCCCCHHH DNAVTVINREIVRKMTEFGYIRNGERVRTFTIPTIDLVKEWMDNAQ HHHHHHHHHHHHHHHHHCCCEECCCEEEEEECCHHHHHHHHHHCCC >Mature Secondary Structure MNAHLMLRTIQIILVVGLIGSLNPALVWADSGLRAPIEVRASTFGYPTGTHPLAAHYPKP CCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCEECCCCC SVALQNGDQISFTVDIPQAGEYTLAIDAVVPEEVMFLPPEALVQIDGHAEHWRLIFPLFY CEEECCCCEEEEEEECCCCCCEEEEEEEECCCCEEECCCHHEEEECCCCCCEEEEEEEHC QDTVDTFPVDRYGNETLIPQARLTRWSQVFLRDVSFSQPYPTVISLPAGQQRFRLSIHEA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEEEECCC PVVIGSIYLIPATRYPGYVEYQRERQAAATTGVLIELEAEKPSYKNDTAIRPISRQNLEV CEEEEEEEEEECCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCEE TPYDPYRSRLNVIGGESWDQSGTTVYYEFTVPQDGWYNITLRAIQDYKNNFTVYRRILID CCCCHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEHHHHCCCEEEEEEHHC DRVLFAELNAVPFNYDPVWRNYTLGGETPYQIYLTRGSHVLGIEATTAPYHDSIQRVRVG CEEEEEEECCCCCCCCCCCCEEECCCCCCEEEEEECCCEEEEEEECCCCCHHHHHHHHHH LRAIADIAFEIKRLTGNQIDIYKEWEIADYIPDIRERLLTLADQLRADQQTLLAVNQTPA HHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC SPEVLAYQMAIDNLMILAQDPNRIPVRMSRLSEGAGSAAQLLGSILPSLQSQPLAIDKIY CHHHEEEEEECCCEEEEEECCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEE IHSPDIIPPEPTISVSAIAFDWMQRFIASFRSDPYQSIGAAPDELEVWVNRPQQYVNLLQ EECCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHCCCHHHHHHHH QLTDKYFTPQTGIKVKFSIMPNESKLVLACAAGTQPDIALGVSTNIPYELAIRNALYDLR HHHHHCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHH QFPDFDRFIRIYAPGSLLSYIIDQSVYAIPETQDFWVTYYRKDVLERLGLPVPQTWDEVL HCCCHHHEEEEEECHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHH EILPELQRYGMNYNTALSSGSGLKGYLVTAPYLLNHGASLYTQEGLSGLGTDEAIRAIRF HHHHHHHHCCCCCCCCCCCCCCCCEEEEECCHHHHCCCHHHHHHCCCCCCHHHHHHHHHH MAESFTIYGMPLTTSSFYESFRSGELPIGISNFETYLKLLTAAPEIDGLWDIALYPATVL HHHCEEEEEECCCCHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCCCCCEEEEEECCEEEC PDGRQLRYATGSAQAAMMFANTDKATEGWTFLKWWMSTETQVMFQQELIMNYGLEYLWNP CCCCEEEEECCCCCEEEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCHHHEECC ANLEAFRFTPIPSAHRDIILQQWQWLQEPVKLPGSYMQERELSNVWNRIVFDGANPRAAI CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEECCCCCCHHH DNAVTVINREIVRKMTEFGYIRNGERVRTFTIPTIDLVKEWMDNAQ HHHHHHHHHHHHHHHHHCCCEECCCEEEEEECCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA