Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is 222527376
Identifier: 222527376
GI number: 222527376
Start: 5159519
End: 5160979
Strand: Direct
Name: 222527376
Synonym: Chy400_4166
Alternate gene names: NA
Gene position: 5159519-5160979 (Clockwise)
Preceding gene: 222527375
Following gene: 222527377
Centisome position: 97.92
GC content: 55.58
Gene sequence:
>1461_bases ATGAAAGCATTTGCCAAAGGGGGAATCGTGCTGGTGCTGGTCTTGATGTTGAGTGGACTGGCCGGCTGTACATCAGCTCC GACAGCACCAGCCGAACAGCCGACGCAGGCACCAACCACCGCTGCCCAAGCACCGACCGCAGCACCAACAACAGCACCTG CGACCGAACCGTCACCGGTTACCACTGACAGACAACCCGTTACCCTGCGTTACGCCAACTGGAACCTTGGCACCGAAGAA GAGAACAACATTCAGCGTCGCCTGGTTAAGGCGTATATGGAACTCAACCCCCACGTGACCATCGAGTTTGTCGATATGTC CGGCGGTGGTTGGGATGATATGCTCAACACCTATGCGGCTCGCGGTGAATTGCCCGATGTCTTCATGGCGAACAATATGC CGCTCTACGTGAAAAACGGCTGGCTGGCCGATCTCACATCACTGGTAGAAAACGATCCCGATTGGCCATTGATCCCTGAA GTATTACGTTCGGGCGTGACCTACAATGGCCGCGTCATGGGATTACCAGCCGCGCAGTTTATCATGGGCTATTTTGTGAA TCGCGATCTCTACGAAGCGGCCAACCTCGATGCACCTGAATACGGCTTTAGCGTCGAGGAGTTCAACACCGCCGTCACCA GCCTGCACAACCCGGCCCGTGGTATCCTGGGGCTTGACGAGATGGAATTTGTGATGGGCTGGTACCCCCATGTGCTCGAC AACAATTTGCAATGGTTTAGCTTCGATGGGGTCCACATGAACTACAATTCGGCTGCCTTCAAGGAGACCGTAGCCAAAGT TGCAGAGTTGAAACCCTATACCTGGCAGGGTCTCACCGACGAGCAAAAGCCGAATTTCAAGTCAGCCGGCCCATGGGAGC TGTTCCTGAACCAGGAAGTAGGCATGCGCTGGGAAGGCGGATGGGCTATTCCGCAGATTGCACAAAACGCCACCTTCGAT TGGGATTTCGTCGGCATCCCTGGTGGTAATCAGGCCATCGTTATGGATATTATCGTGGTCTCCAAGACGGCGCCGAACCT GGAAGAAGCCTACCAGTTTGCCCGTTGGATGACCTTCTCGCGCGCTGCCTACGCCAAAGAGGTTGAGCTGGCCCGCGAGA TGGGCAGTGTGCCGAGCAAGATGCCGGTCGCGGTGGACGACGAATCTATCCAGTTGTATCGCCAGTTCTTCGACAAACCG GGTATCAATGCGGCCCTTGCCAACCTGGACAACAGCCTGGTAGAGTCGCTGGCCAAGATCGTACCGGGCTATATCCAGGC CCGCTGGGAGGGTAAGCCGGGGATCGACATCGGTGAAGACAAGGATGTGAACATGTGGTTCATGTTCTTCCGCGCTGCCG ATGGTATCTACAAATACGAAGATTACGCAGCCCAACTGGAAACCTTTGCCAACAACCTGCTCGACTCGGCACGGGCTGAG GTTGAATCGGCATTGAAGTAG
Upstream 100 bases:
>100_bases CTAACAATCACGAGAAGGAGGTGAGCAACCTGTAGCACGACATAGCGATGTTGCGTGTTTCAGATTCGCAGAAGATTCTC GCGTTTCAAGGAGGAGAAGC
Downstream 100 bases:
>100_bases TCAGGATCACGTAAGGTGAGGGTACTATTGTGCCCTCACCTTATCACAGAGCAGACAGACGCTCAAGCCATGGTATCGCG AGGCACCATGAACGCTCATC
Product: family 1 extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 486; Mature: 486
Protein sequence:
>486_residues MKAFAKGGIVLVLVLMLSGLAGCTSAPTAPAEQPTQAPTTAAQAPTAAPTTAPATEPSPVTTDRQPVTLRYANWNLGTEE ENNIQRRLVKAYMELNPHVTIEFVDMSGGGWDDMLNTYAARGELPDVFMANNMPLYVKNGWLADLTSLVENDPDWPLIPE VLRSGVTYNGRVMGLPAAQFIMGYFVNRDLYEAANLDAPEYGFSVEEFNTAVTSLHNPARGILGLDEMEFVMGWYPHVLD NNLQWFSFDGVHMNYNSAAFKETVAKVAELKPYTWQGLTDEQKPNFKSAGPWELFLNQEVGMRWEGGWAIPQIAQNATFD WDFVGIPGGNQAIVMDIIVVSKTAPNLEEAYQFARWMTFSRAAYAKEVELAREMGSVPSKMPVAVDDESIQLYRQFFDKP GINAALANLDNSLVESLAKIVPGYIQARWEGKPGIDIGEDKDVNMWFMFFRAADGIYKYEDYAAQLETFANNLLDSARAE VESALK
Sequences:
>Translated_486_residues MKAFAKGGIVLVLVLMLSGLAGCTSAPTAPAEQPTQAPTTAAQAPTAAPTTAPATEPSPVTTDRQPVTLRYANWNLGTEE ENNIQRRLVKAYMELNPHVTIEFVDMSGGGWDDMLNTYAARGELPDVFMANNMPLYVKNGWLADLTSLVENDPDWPLIPE VLRSGVTYNGRVMGLPAAQFIMGYFVNRDLYEAANLDAPEYGFSVEEFNTAVTSLHNPARGILGLDEMEFVMGWYPHVLD NNLQWFSFDGVHMNYNSAAFKETVAKVAELKPYTWQGLTDEQKPNFKSAGPWELFLNQEVGMRWEGGWAIPQIAQNATFD WDFVGIPGGNQAIVMDIIVVSKTAPNLEEAYQFARWMTFSRAAYAKEVELAREMGSVPSKMPVAVDDESIQLYRQFFDKP GINAALANLDNSLVESLAKIVPGYIQARWEGKPGIDIGEDKDVNMWFMFFRAADGIYKYEDYAAQLETFANNLLDSARAE VESALK >Mature_486_residues MKAFAKGGIVLVLVLMLSGLAGCTSAPTAPAEQPTQAPTTAAQAPTAAPTTAPATEPSPVTTDRQPVTLRYANWNLGTEE ENNIQRRLVKAYMELNPHVTIEFVDMSGGGWDDMLNTYAARGELPDVFMANNMPLYVKNGWLADLTSLVENDPDWPLIPE VLRSGVTYNGRVMGLPAAQFIMGYFVNRDLYEAANLDAPEYGFSVEEFNTAVTSLHNPARGILGLDEMEFVMGWYPHVLD NNLQWFSFDGVHMNYNSAAFKETVAKVAELKPYTWQGLTDEQKPNFKSAGPWELFLNQEVGMRWEGGWAIPQIAQNATFD WDFVGIPGGNQAIVMDIIVVSKTAPNLEEAYQFARWMTFSRAAYAKEVELAREMGSVPSKMPVAVDDESIQLYRQFFDKP GINAALANLDNSLVESLAKIVPGYIQARWEGKPGIDIGEDKDVNMWFMFFRAADGIYKYEDYAAQLETFANNLLDSARAE VESALK
Specific function: Unknown
COG id: COG1653
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53928; Mature: 53928
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAFAKGGIVLVLVLMLSGLAGCTSAPTAPAEQPTQAPTTAAQAPTAAPTTAPATEPSPV CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCC TTDRQPVTLRYANWNLGTEEENNIQRRLVKAYMELNPHVTIEFVDMSGGGWDDMLNTYAA CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHH RGELPDVFMANNMPLYVKNGWLADLTSLVENDPDWPLIPEVLRSGVTYNGRVMGLPAAQF CCCCCCEEEECCCEEEEECCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEECCCHHHH IMGYFVNRDLYEAANLDAPEYGFSVEEFNTAVTSLHNPARGILGLDEMEFVMGWYPHVLD HHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHC NNLQWFSFDGVHMNYNSAAFKETVAKVAELKPYTWQGLTDEQKPNFKSAGPWELFLNQEV CCCEEEEECCEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC GMRWEGGWAIPQIAQNATFDWDFVGIPGGNQAIVMDIIVVSKTAPNLEEAYQFARWMTFS CCEECCCCCHHHHHCCCCCCEEEEECCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHH RAAYAKEVELAREMGSVPSKMPVAVDDESIQLYRQFFDKPGINAALANLDNSLVESLAKI HHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHH VPGYIQARWEGKPGIDIGEDKDVNMWFMFFRAADGIYKYEDYAAQLETFANNLLDSARAE CCCCEEEEECCCCCCCCCCCCCCHHEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH VESALK HHHHCC >Mature Secondary Structure MKAFAKGGIVLVLVLMLSGLAGCTSAPTAPAEQPTQAPTTAAQAPTAAPTTAPATEPSPV CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCC TTDRQPVTLRYANWNLGTEEENNIQRRLVKAYMELNPHVTIEFVDMSGGGWDDMLNTYAA CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHH RGELPDVFMANNMPLYVKNGWLADLTSLVENDPDWPLIPEVLRSGVTYNGRVMGLPAAQF CCCCCCEEEECCCEEEEECCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEECCCHHHH IMGYFVNRDLYEAANLDAPEYGFSVEEFNTAVTSLHNPARGILGLDEMEFVMGWYPHVLD HHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHC NNLQWFSFDGVHMNYNSAAFKETVAKVAELKPYTWQGLTDEQKPNFKSAGPWELFLNQEV CCCEEEEECCEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC GMRWEGGWAIPQIAQNATFDWDFVGIPGGNQAIVMDIIVVSKTAPNLEEAYQFARWMTFS CCEECCCCCHHHHHCCCCCCEEEEECCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHH RAAYAKEVELAREMGSVPSKMPVAVDDESIQLYRQFFDKPGINAALANLDNSLVESLAKI HHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHH VPGYIQARWEGKPGIDIGEDKDVNMWFMFFRAADGIYKYEDYAAQLETFANNLLDSARAE CCCCEEEEECCCCCCCCCCCCCCHHEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH VESALK HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA