Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222527376

Identifier: 222527376

GI number: 222527376

Start: 5159519

End: 5160979

Strand: Direct

Name: 222527376

Synonym: Chy400_4166

Alternate gene names: NA

Gene position: 5159519-5160979 (Clockwise)

Preceding gene: 222527375

Following gene: 222527377

Centisome position: 97.92

GC content: 55.58

Gene sequence:

>1461_bases
ATGAAAGCATTTGCCAAAGGGGGAATCGTGCTGGTGCTGGTCTTGATGTTGAGTGGACTGGCCGGCTGTACATCAGCTCC
GACAGCACCAGCCGAACAGCCGACGCAGGCACCAACCACCGCTGCCCAAGCACCGACCGCAGCACCAACAACAGCACCTG
CGACCGAACCGTCACCGGTTACCACTGACAGACAACCCGTTACCCTGCGTTACGCCAACTGGAACCTTGGCACCGAAGAA
GAGAACAACATTCAGCGTCGCCTGGTTAAGGCGTATATGGAACTCAACCCCCACGTGACCATCGAGTTTGTCGATATGTC
CGGCGGTGGTTGGGATGATATGCTCAACACCTATGCGGCTCGCGGTGAATTGCCCGATGTCTTCATGGCGAACAATATGC
CGCTCTACGTGAAAAACGGCTGGCTGGCCGATCTCACATCACTGGTAGAAAACGATCCCGATTGGCCATTGATCCCTGAA
GTATTACGTTCGGGCGTGACCTACAATGGCCGCGTCATGGGATTACCAGCCGCGCAGTTTATCATGGGCTATTTTGTGAA
TCGCGATCTCTACGAAGCGGCCAACCTCGATGCACCTGAATACGGCTTTAGCGTCGAGGAGTTCAACACCGCCGTCACCA
GCCTGCACAACCCGGCCCGTGGTATCCTGGGGCTTGACGAGATGGAATTTGTGATGGGCTGGTACCCCCATGTGCTCGAC
AACAATTTGCAATGGTTTAGCTTCGATGGGGTCCACATGAACTACAATTCGGCTGCCTTCAAGGAGACCGTAGCCAAAGT
TGCAGAGTTGAAACCCTATACCTGGCAGGGTCTCACCGACGAGCAAAAGCCGAATTTCAAGTCAGCCGGCCCATGGGAGC
TGTTCCTGAACCAGGAAGTAGGCATGCGCTGGGAAGGCGGATGGGCTATTCCGCAGATTGCACAAAACGCCACCTTCGAT
TGGGATTTCGTCGGCATCCCTGGTGGTAATCAGGCCATCGTTATGGATATTATCGTGGTCTCCAAGACGGCGCCGAACCT
GGAAGAAGCCTACCAGTTTGCCCGTTGGATGACCTTCTCGCGCGCTGCCTACGCCAAAGAGGTTGAGCTGGCCCGCGAGA
TGGGCAGTGTGCCGAGCAAGATGCCGGTCGCGGTGGACGACGAATCTATCCAGTTGTATCGCCAGTTCTTCGACAAACCG
GGTATCAATGCGGCCCTTGCCAACCTGGACAACAGCCTGGTAGAGTCGCTGGCCAAGATCGTACCGGGCTATATCCAGGC
CCGCTGGGAGGGTAAGCCGGGGATCGACATCGGTGAAGACAAGGATGTGAACATGTGGTTCATGTTCTTCCGCGCTGCCG
ATGGTATCTACAAATACGAAGATTACGCAGCCCAACTGGAAACCTTTGCCAACAACCTGCTCGACTCGGCACGGGCTGAG
GTTGAATCGGCATTGAAGTAG

Upstream 100 bases:

>100_bases
CTAACAATCACGAGAAGGAGGTGAGCAACCTGTAGCACGACATAGCGATGTTGCGTGTTTCAGATTCGCAGAAGATTCTC
GCGTTTCAAGGAGGAGAAGC

Downstream 100 bases:

>100_bases
TCAGGATCACGTAAGGTGAGGGTACTATTGTGCCCTCACCTTATCACAGAGCAGACAGACGCTCAAGCCATGGTATCGCG
AGGCACCATGAACGCTCATC

Product: family 1 extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 486; Mature: 486

Protein sequence:

>486_residues
MKAFAKGGIVLVLVLMLSGLAGCTSAPTAPAEQPTQAPTTAAQAPTAAPTTAPATEPSPVTTDRQPVTLRYANWNLGTEE
ENNIQRRLVKAYMELNPHVTIEFVDMSGGGWDDMLNTYAARGELPDVFMANNMPLYVKNGWLADLTSLVENDPDWPLIPE
VLRSGVTYNGRVMGLPAAQFIMGYFVNRDLYEAANLDAPEYGFSVEEFNTAVTSLHNPARGILGLDEMEFVMGWYPHVLD
NNLQWFSFDGVHMNYNSAAFKETVAKVAELKPYTWQGLTDEQKPNFKSAGPWELFLNQEVGMRWEGGWAIPQIAQNATFD
WDFVGIPGGNQAIVMDIIVVSKTAPNLEEAYQFARWMTFSRAAYAKEVELAREMGSVPSKMPVAVDDESIQLYRQFFDKP
GINAALANLDNSLVESLAKIVPGYIQARWEGKPGIDIGEDKDVNMWFMFFRAADGIYKYEDYAAQLETFANNLLDSARAE
VESALK

Sequences:

>Translated_486_residues
MKAFAKGGIVLVLVLMLSGLAGCTSAPTAPAEQPTQAPTTAAQAPTAAPTTAPATEPSPVTTDRQPVTLRYANWNLGTEE
ENNIQRRLVKAYMELNPHVTIEFVDMSGGGWDDMLNTYAARGELPDVFMANNMPLYVKNGWLADLTSLVENDPDWPLIPE
VLRSGVTYNGRVMGLPAAQFIMGYFVNRDLYEAANLDAPEYGFSVEEFNTAVTSLHNPARGILGLDEMEFVMGWYPHVLD
NNLQWFSFDGVHMNYNSAAFKETVAKVAELKPYTWQGLTDEQKPNFKSAGPWELFLNQEVGMRWEGGWAIPQIAQNATFD
WDFVGIPGGNQAIVMDIIVVSKTAPNLEEAYQFARWMTFSRAAYAKEVELAREMGSVPSKMPVAVDDESIQLYRQFFDKP
GINAALANLDNSLVESLAKIVPGYIQARWEGKPGIDIGEDKDVNMWFMFFRAADGIYKYEDYAAQLETFANNLLDSARAE
VESALK
>Mature_486_residues
MKAFAKGGIVLVLVLMLSGLAGCTSAPTAPAEQPTQAPTTAAQAPTAAPTTAPATEPSPVTTDRQPVTLRYANWNLGTEE
ENNIQRRLVKAYMELNPHVTIEFVDMSGGGWDDMLNTYAARGELPDVFMANNMPLYVKNGWLADLTSLVENDPDWPLIPE
VLRSGVTYNGRVMGLPAAQFIMGYFVNRDLYEAANLDAPEYGFSVEEFNTAVTSLHNPARGILGLDEMEFVMGWYPHVLD
NNLQWFSFDGVHMNYNSAAFKETVAKVAELKPYTWQGLTDEQKPNFKSAGPWELFLNQEVGMRWEGGWAIPQIAQNATFD
WDFVGIPGGNQAIVMDIIVVSKTAPNLEEAYQFARWMTFSRAAYAKEVELAREMGSVPSKMPVAVDDESIQLYRQFFDKP
GINAALANLDNSLVESLAKIVPGYIQARWEGKPGIDIGEDKDVNMWFMFFRAADGIYKYEDYAAQLETFANNLLDSARAE
VESALK

Specific function: Unknown

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53928; Mature: 53928

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAFAKGGIVLVLVLMLSGLAGCTSAPTAPAEQPTQAPTTAAQAPTAAPTTAPATEPSPV
CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCC
TTDRQPVTLRYANWNLGTEEENNIQRRLVKAYMELNPHVTIEFVDMSGGGWDDMLNTYAA
CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHH
RGELPDVFMANNMPLYVKNGWLADLTSLVENDPDWPLIPEVLRSGVTYNGRVMGLPAAQF
CCCCCCEEEECCCEEEEECCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEECCCHHHH
IMGYFVNRDLYEAANLDAPEYGFSVEEFNTAVTSLHNPARGILGLDEMEFVMGWYPHVLD
HHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHC
NNLQWFSFDGVHMNYNSAAFKETVAKVAELKPYTWQGLTDEQKPNFKSAGPWELFLNQEV
CCCEEEEECCEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
GMRWEGGWAIPQIAQNATFDWDFVGIPGGNQAIVMDIIVVSKTAPNLEEAYQFARWMTFS
CCEECCCCCHHHHHCCCCCCEEEEECCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHH
RAAYAKEVELAREMGSVPSKMPVAVDDESIQLYRQFFDKPGINAALANLDNSLVESLAKI
HHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHH
VPGYIQARWEGKPGIDIGEDKDVNMWFMFFRAADGIYKYEDYAAQLETFANNLLDSARAE
CCCCEEEEECCCCCCCCCCCCCCHHEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VESALK
HHHHCC
>Mature Secondary Structure
MKAFAKGGIVLVLVLMLSGLAGCTSAPTAPAEQPTQAPTTAAQAPTAAPTTAPATEPSPV
CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCC
TTDRQPVTLRYANWNLGTEEENNIQRRLVKAYMELNPHVTIEFVDMSGGGWDDMLNTYAA
CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHH
RGELPDVFMANNMPLYVKNGWLADLTSLVENDPDWPLIPEVLRSGVTYNGRVMGLPAAQF
CCCCCCEEEECCCEEEEECCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEECCCHHHH
IMGYFVNRDLYEAANLDAPEYGFSVEEFNTAVTSLHNPARGILGLDEMEFVMGWYPHVLD
HHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHC
NNLQWFSFDGVHMNYNSAAFKETVAKVAELKPYTWQGLTDEQKPNFKSAGPWELFLNQEV
CCCEEEEECCEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
GMRWEGGWAIPQIAQNATFDWDFVGIPGGNQAIVMDIIVVSKTAPNLEEAYQFARWMTFS
CCEECCCCCHHHHHCCCCCCEEEEECCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHH
RAAYAKEVELAREMGSVPSKMPVAVDDESIQLYRQFFDKPGINAALANLDNSLVESLAKI
HHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHH
VPGYIQARWEGKPGIDIGEDKDVNMWFMFFRAADGIYKYEDYAAQLETFANNLLDSARAE
CCCCEEEEECCCCCCCCCCCCCCHHEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VESALK
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA