| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222527357
Identifier: 222527357
GI number: 222527357
Start: 5133132
End: 5133509
Strand: Reverse
Name: 222527357
Synonym: Chy400_4146
Alternate gene names: NA
Gene position: 5133509-5133132 (Counterclockwise)
Preceding gene: 222527358
Following gene: 222527356
Centisome position: 97.43
GC content: 52.38
Gene sequence:
>378_bases ATGAGTGTGTGGAAACCCGAAGATATTGACGTCATTGGCAATTCAATGGAAGTGCGGGTTGCCGCTCTGAGGCGGGATGG TACATTGCAGAGACCGGTTACCATCTGGATCGTGCGAGTCGGTAATGAGTTGTTTGTGCGCTCCTGGCGTGGGCAAAAGG GCGAGTGGTTTCGTGACGCTCAGGCGCAAGGGAGAGGACGGCTGTGGGCTGGTAGTATCGAGCGAGACGTCTGCTTTGTG ATGGAAACCGATCCCGAACTTAATGACCAGATTGATGCTGTCTATCGTACGAAATATCGCCATTTCATGCAATACGTCAT CCCAATGATTCGTCCAGAGGTGCGCACGACAACTCTGAAGCTTATGCCGTGTTCGTAG
Upstream 100 bases:
>100_bases CCGGGCAATTAAGGTGCTACTGAAGCCATAGGAGCGACATCAACATTTGTCGCCCATGATAAAAGCAAAGGCTAATCGGT TGTTGCAAGGAGGCTTGCCA
Downstream 100 bases:
>100_bases AATGCCACACATTCCCTCAACTACCTCAAACGATGGTGTCTAATGAACGTTAATAGTGGTTATCGCGCTTCTGAACGTTG AACTGACTGCATGTACAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MSVWKPEDIDVIGNSMEVRVAALRRDGTLQRPVTIWIVRVGNELFVRSWRGQKGEWFRDAQAQGRGRLWAGSIERDVCFV METDPELNDQIDAVYRTKYRHFMQYVIPMIRPEVRTTTLKLMPCS
Sequences:
>Translated_125_residues MSVWKPEDIDVIGNSMEVRVAALRRDGTLQRPVTIWIVRVGNELFVRSWRGQKGEWFRDAQAQGRGRLWAGSIERDVCFV METDPELNDQIDAVYRTKYRHFMQYVIPMIRPEVRTTTLKLMPCS >Mature_124_residues SVWKPEDIDVIGNSMEVRVAALRRDGTLQRPVTIWIVRVGNELFVRSWRGQKGEWFRDAQAQGRGRLWAGSIERDVCFVM ETDPELNDQIDAVYRTKYRHFMQYVIPMIRPEVRTTTLKLMPCS
Specific function: Unknown
COG id: COG4334
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14673; Mature: 14542
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVWKPEDIDVIGNSMEVRVAALRRDGTLQRPVTIWIVRVGNELFVRSWRGQKGEWFRDA CCCCCCCCCEEECCCEEEEEEEEECCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCCCC QAQGRGRLWAGSIERDVCFVMETDPELNDQIDAVYRTKYRHFMQYVIPMIRPEVRTTTLK CCCCCCCEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE LMPCS EEECC >Mature Secondary Structure SVWKPEDIDVIGNSMEVRVAALRRDGTLQRPVTIWIVRVGNELFVRSWRGQKGEWFRDA CCCCCCCCEEECCCEEEEEEEEECCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCCCC QAQGRGRLWAGSIERDVCFVMETDPELNDQIDAVYRTKYRHFMQYVIPMIRPEVRTTTLK CCCCCCCEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE LMPCS EEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA