Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is 222527350
Identifier: 222527350
GI number: 222527350
Start: 5125241
End: 5126098
Strand: Direct
Name: 222527350
Synonym: Chy400_4139
Alternate gene names: NA
Gene position: 5125241-5126098 (Clockwise)
Preceding gene: 222527349
Following gene: 222527351
Centisome position: 97.27
GC content: 56.64
Gene sequence:
>858_bases ATGCAACCATTAGCGCAAACGCTGGACCGGATCCGCACAATCAGTGAGTATCTCAAACCAGAATTTGGCATACCTGCCGA TGGAAATTGGGTGTCCGTAGCAGATGATTTTGTGTCAGGTTCGCCCTGGCTCACGAGCATGATCGCTGCAGAACAGACCC GCCTGCGCACAACATCTGCGGCTATTATCGGTAGCACGCTGTTGCAGAACTACCAGTGGCCAATTATTCCTACCGTGGTG GCGTGCTATCTGTTTGAACAGCGGGTGCCAGATTTGGCCCCTGCCAATACGCGCGTCCACTTCACTGCCGAGCACCAGGC AGACGCACTGGCTCTCCTCGGCGGACGCTTTAGCGCCTTACCTGATGACCCGGCAGCAGAACACCCGGATGCGACTATCG TGCCCGATCGCGCAGCGCTGCGGGATGCGATGCGGACAGGTATTGAGTCGCACTTTGCGGTGGTTATTGAACACATTTGC GCGGCGTTAGGTTGCAAACCGCGCGGTCTATGGCTGAACGTTGCTGATGCAGTAGCCAATGCGCTGATCTGGCTTGCCCA GCAACATGCAGCGTTTGACCCGACCCAGATCGAAGCCGAAGTTGAGGCAGTGATCCGTGTACCCGGCTCGCCGCTGAACA ATCGGCAAGTTGGGTTGATCCAGCTCAGTTACGGTGAAAACCGGCAGCTTTTTCTCCGGCGGGCTACTTGCTGTTACTGG TACAAAACTGAAGGTGGTGAGTATTGCCTGACATGCCCCCACCGCACTGCCGAAGATCGGCAGGCACGACTCCTCGCTTA CATGGCGCAGAAGTACACCCAGCAACAGCAGCTCGTTCAGGAAGAGGTAACGGCATGA
Upstream 100 bases:
>100_bases CTGGTGCGCTGGCGGGTGAAACGATGACAGCGTGAAGGGTGATATGAGTGGCTGGCGATGGCATCATCAGCGTACCTGAT CGCATGAGAGGAATATCGAG
Downstream 100 bases:
>100_bases GTGTTGAGGTTCCATCTTCCCGTGGTCAGCAGTCACCGTGGCTAACCCTGCGCACCCGTGGTCTTTCTTTTCGCATTGAC CGACGTGTGCCGCCGGTACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MQPLAQTLDRIRTISEYLKPEFGIPADGNWVSVADDFVSGSPWLTSMIAAEQTRLRTTSAAIIGSTLLQNYQWPIIPTVV ACYLFEQRVPDLAPANTRVHFTAEHQADALALLGGRFSALPDDPAAEHPDATIVPDRAALRDAMRTGIESHFAVVIEHIC AALGCKPRGLWLNVADAVANALIWLAQQHAAFDPTQIEAEVEAVIRVPGSPLNNRQVGLIQLSYGENRQLFLRRATCCYW YKTEGGEYCLTCPHRTAEDRQARLLAYMAQKYTQQQQLVQEEVTA
Sequences:
>Translated_285_residues MQPLAQTLDRIRTISEYLKPEFGIPADGNWVSVADDFVSGSPWLTSMIAAEQTRLRTTSAAIIGSTLLQNYQWPIIPTVV ACYLFEQRVPDLAPANTRVHFTAEHQADALALLGGRFSALPDDPAAEHPDATIVPDRAALRDAMRTGIESHFAVVIEHIC AALGCKPRGLWLNVADAVANALIWLAQQHAAFDPTQIEAEVEAVIRVPGSPLNNRQVGLIQLSYGENRQLFLRRATCCYW YKTEGGEYCLTCPHRTAEDRQARLLAYMAQKYTQQQQLVQEEVTA >Mature_285_residues MQPLAQTLDRIRTISEYLKPEFGIPADGNWVSVADDFVSGSPWLTSMIAAEQTRLRTTSAAIIGSTLLQNYQWPIIPTVV ACYLFEQRVPDLAPANTRVHFTAEHQADALALLGGRFSALPDDPAAEHPDATIVPDRAALRDAMRTGIESHFAVVIEHIC AALGCKPRGLWLNVADAVANALIWLAQQHAAFDPTQIEAEVEAVIRVPGSPLNNRQVGLIQLSYGENRQLFLRRATCCYW YKTEGGEYCLTCPHRTAEDRQARLLAYMAQKYTQQQQLVQEEVTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31614; Mature: 31614
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPLAQTLDRIRTISEYLKPEFGIPADGNWVSVADDFVSGSPWLTSMIAAEQTRLRTTSA CCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHH AIIGSTLLQNYQWPIIPTVVACYLFEQRVPDLAPANTRVHFTAEHQADALALLGGRFSAL HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHCCCCCCC PDDPAAEHPDATIVPDRAALRDAMRTGIESHFAVVIEHICAALGCKPRGLWLNVADAVAN CCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHH ALIWLAQQHAAFDPTQIEAEVEAVIRVPGSPLNNRQVGLIQLSYGENRQLFLRRATCCYW HHHHHHHHHCCCCCHHHHHHHHHHEECCCCCCCCCEEEEEEEECCCCCEEEEEECEEEEE YKTEGGEYCLTCPHRTAEDRQARLLAYMAQKYTQQQQLVQEEVTA EECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQPLAQTLDRIRTISEYLKPEFGIPADGNWVSVADDFVSGSPWLTSMIAAEQTRLRTTSA CCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHH AIIGSTLLQNYQWPIIPTVVACYLFEQRVPDLAPANTRVHFTAEHQADALALLGGRFSAL HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHCCCCCCC PDDPAAEHPDATIVPDRAALRDAMRTGIESHFAVVIEHICAALGCKPRGLWLNVADAVAN CCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHH ALIWLAQQHAAFDPTQIEAEVEAVIRVPGSPLNNRQVGLIQLSYGENRQLFLRRATCCYW HHHHHHHHHCCCCCHHHHHHHHHHEECCCCCCCCCEEEEEEEECCCCCEEEEEECEEEEE YKTEGGEYCLTCPHRTAEDRQARLLAYMAQKYTQQQQLVQEEVTA EECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA