Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is yfiZ [H]
Identifier: 222527349
GI number: 222527349
Start: 5124121
End: 5125167
Strand: Direct
Name: yfiZ [H]
Synonym: Chy400_4138
Alternate gene names: 222527349
Gene position: 5124121-5125167 (Clockwise)
Preceding gene: 222527348
Following gene: 222527350
Centisome position: 97.25
GC content: 59.89
Gene sequence:
>1047_bases ATGGCTACAGTTGCTGCAAATACTTCTAGCACACAGACCATCAGCATCAAGCGCTCGCGCCAGATGCTCTTGCTTGGCTT ACCGGTATGTGCAATCATCCTCGGTCTTGCCCTGCTGAGCAGCATCGCTTTCGGCGCTGCGGACATCGCGCCTAACGATG TATGGCAGGCACTGATCGCCTTTAACCCGGCATCGACCGAGCACCTGATCATCCGTACTTTGCGGGTGCCGCGCGCGGCG GTGGCAGCCCTGGTTGGCGCAGCGCTGGCGGTGGCCGGGGCACTGATGCAGGGACTGACCCGCAACCCGCTGGCCGATCC GGGCATCCTTGGCATTGAAACCGGGGCGGCACTGGGTGTCGTTTCTGCCGTCTTCTTTCTCAAGATTGGTTCGTTGTACC TGTACGCTCTGTTTGCCTTTACCGGTGCCGCACTCACTGCACTGGCGGTCTATGCACTCGGTTCAATTGGTCGTGGTGGA CCTACACCGCTGAAGATCACGATTGCCGGTGCCGCACTTACCGCACTGCTTTCATCATTCACCACCGGTATCCTGATCTT CAATCAACGTACCCTCGAAGAGGTGCGCTTCTGGCTGGCCGGCAGCGTCGCCGGCCGTGATCTCAACCTGCTGGCACAGG CGTCGCCATACCTGATCTGTGGATTGCTACTGGCATTGGCGCTGGGGCGGCAGATCACCACCATCTCACTGGGTGACGAG ATCGCGAAGGGTCTCGGTCAACGCACCGGCTGGGTAAAGCTGTTGACTGCCATAGCGACCGTGCTTCTGGCCGGCGCCAG CGTGGCCGTTGCCGGTCCGATTGGATTTGTCGGTCTGGTCATTCCCCACGCGGTGCGTTTTCTGGTTGGAGTGGATTATC GCTGGATTTTACCCTATGCCGCATTGATTGGCGCCACCTTTCTGGTGCTGTCTGACGTGGCCGCACGCCTCATCATTCGC CCAACCGAATTGCCGGTTGGGGTCATGACCGCCCTGATCGGCGGACCCTTCTTCGTCTATCTGGTGCGCTGGCGGGTGAA ACGATGA
Upstream 100 bases:
>100_bases ATTGGGAAACATTTGGCGGTCTACGCTCGGCACAAGGAGTTCTGGATGACATTGAACGATTGTTACTACCACTAGCGTAG CATAGAGGGAGCCTTTTTCG
Downstream 100 bases:
>100_bases CAGCGTGAAGGGTGATATGAGTGGCTGGCGATGGCATCATCAGCGTACCTGATCGCATGAGAGGAATATCGAGATGCAAC CATTAGCGCAAACGCTGGAC
Product: transport system permease
Products: ADP; phosphate; ferric enterobactin [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MATVAANTSSTQTISIKRSRQMLLLGLPVCAIILGLALLSSIAFGAADIAPNDVWQALIAFNPASTEHLIIRTLRVPRAA VAALVGAALAVAGALMQGLTRNPLADPGILGIETGAALGVVSAVFFLKIGSLYLYALFAFTGAALTALAVYALGSIGRGG PTPLKITIAGAALTALLSSFTTGILIFNQRTLEEVRFWLAGSVAGRDLNLLAQASPYLICGLLLALALGRQITTISLGDE IAKGLGQRTGWVKLLTAIATVLLAGASVAVAGPIGFVGLVIPHAVRFLVGVDYRWILPYAALIGATFLVLSDVAARLIIR PTELPVGVMTALIGGPFFVYLVRWRVKR
Sequences:
>Translated_348_residues MATVAANTSSTQTISIKRSRQMLLLGLPVCAIILGLALLSSIAFGAADIAPNDVWQALIAFNPASTEHLIIRTLRVPRAA VAALVGAALAVAGALMQGLTRNPLADPGILGIETGAALGVVSAVFFLKIGSLYLYALFAFTGAALTALAVYALGSIGRGG PTPLKITIAGAALTALLSSFTTGILIFNQRTLEEVRFWLAGSVAGRDLNLLAQASPYLICGLLLALALGRQITTISLGDE IAKGLGQRTGWVKLLTAIATVLLAGASVAVAGPIGFVGLVIPHAVRFLVGVDYRWILPYAALIGATFLVLSDVAARLIIR PTELPVGVMTALIGGPFFVYLVRWRVKR >Mature_347_residues ATVAANTSSTQTISIKRSRQMLLLGLPVCAIILGLALLSSIAFGAADIAPNDVWQALIAFNPASTEHLIIRTLRVPRAAV AALVGAALAVAGALMQGLTRNPLADPGILGIETGAALGVVSAVFFLKIGSLYLYALFAFTGAALTALAVYALGSIGRGGP TPLKITIAGAALTALLSSFTTGILIFNQRTLEEVRFWLAGSVAGRDLNLLAQASPYLICGLLLALALGRQITTISLGDEI AKGLGQRTGWVKLLTAIATVLLAGASVAVAGPIGFVGLVIPHAVRFLVGVDYRWILPYAALIGATFLVLSDVAARLIIRP TELPVGVMTALIGGPFFVYLVRWRVKR
Specific function: Part of the ABC transporter complex yfiYZ/yfhA/yusV involved in import of the iron-hydroxamate siderophores schizokinen, arthrobactin and corprogen (Probable) [H]
COG id: COG0609
COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786805, Length=284, Percent_Identity=40.8450704225352, Blast_Score=179, Evalue=3e-46, Organism=Escherichia coli, GI1790740, Length=293, Percent_Identity=38.5665529010239, Blast_Score=170, Evalue=1e-43, Organism=Escherichia coli, GI1790741, Length=329, Percent_Identity=36.7781155015198, Blast_Score=163, Evalue=2e-41, Organism=Escherichia coli, GI1788004, Length=305, Percent_Identity=36.7213114754098, Blast_Score=124, Evalue=1e-29, Organism=Escherichia coli, GI1786347, Length=276, Percent_Identity=31.5217391304348, Blast_Score=116, Evalue=2e-27, Organism=Escherichia coli, GI1786804, Length=301, Percent_Identity=35.5481727574751, Blast_Score=115, Evalue=4e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000522 [H]
Pfam domain/function: PF01032 FecCD [H]
EC number: NA
Molecular weight: Translated: 36132; Mature: 36000
Theoretical pI: Translated: 10.77; Mature: 10.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATVAANTSSTQTISIKRSRQMLLLGLPVCAIILGLALLSSIAFGAADIAPNDVWQALIA CCEEECCCCCCEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH FNPASTEHLIIRTLRVPRAAVAALVGAALAVAGALMQGLTRNPLADPGILGIETGAALGV CCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHH VSAVFFLKIGSLYLYALFAFTGAALTALAVYALGSIGRGGPTPLKITIAGAALTALLSSF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHH TTGILIFNQRTLEEVRFWLAGSVAGRDLNLLAQASPYLICGLLLALALGRQITTISLGDE HHHEEEECHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCEEEEECCHH IAKGLGQRTGWVKLLTAIATVLLAGASVAVAGPIGFVGLVIPHAVRFLVGVDYRWILPYA HHHHHCCCCHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHH ALIGATFLVLSDVAARLIIRPTELPVGVMTALIGGPFFVYLVRWRVKR HHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHCCHHHHHHHHHHCCC >Mature Secondary Structure ATVAANTSSTQTISIKRSRQMLLLGLPVCAIILGLALLSSIAFGAADIAPNDVWQALIA CEEECCCCCCEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH FNPASTEHLIIRTLRVPRAAVAALVGAALAVAGALMQGLTRNPLADPGILGIETGAALGV CCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHH VSAVFFLKIGSLYLYALFAFTGAALTALAVYALGSIGRGGPTPLKITIAGAALTALLSSF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHH TTGILIFNQRTLEEVRFWLAGSVAGRDLNLLAQASPYLICGLLLALALGRQITTISLGDE HHHEEEECHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCEEEEECCHH IAKGLGQRTGWVKLLTAIATVLLAGASVAVAGPIGFVGLVIPHAVRFLVGVDYRWILPYA HHHHHCCCCHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHH ALIGATFLVLSDVAARLIIRPTELPVGVMTALIGGPFFVYLVRWRVKR HHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; ferric enterobactin [Periplasm]; H2O [C]
Specific reaction: ATP + ferric enterobactin [Periplasm] + H2O = ADP + phosphate + ferric enterobactin [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8946165; 9384377 [H]