Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is 222527073

Identifier: 222527073

GI number: 222527073

Start: 4796666

End: 4797637

Strand: Direct

Name: 222527073

Synonym: Chy400_3852

Alternate gene names: NA

Gene position: 4796666-4797637 (Clockwise)

Preceding gene: 222527072

Following gene: 222527074

Centisome position: 91.04

GC content: 59.98

Gene sequence:

>972_bases
ATGATTACAACCATCACGACCAGCCGGGAACAGTGGACTCCCGATACGGCACTGGCCGGCTTTGAAACGAGGTCGATCAA
TCTGCGCAGTGGCCGGGCAGTGTTGATCCGCCAGATCAACCCGCCAAACCAGGGCCGAGCCGTGCTGTACGTTCACGGCT
ACTCCGACTACTTTTTCCAGGCCCATCTGGCCGATGTGTTCCGTGCCCACGGCTACGCATTCTACGCCATTGATCTACCC
GGCCACGGTCGTGCAATTGAAACTGGTCAGATTCCCTGTTTCTACCGCGACATCACCGAATTTTACCCGTTCCTCGACGC
CGCGATAAACCTGATCGATGCCGAACAGCAGCAACCCTGGCTGGTATTGCACGGCCATTCGGCAGGAGGACTGATCACTG
CCCTGTACGCCGCCGAAGGTCAGCAGCGTGAACGGATCGGCGCCCTGGTGCTCAATAGTCCATTCTTCGACTTTTTTATT
GATCGGGTGACCCGGGCATCGATCCCGTTGGTGATGTGGCTTGGGCGTATCCAACCAACGCGCGTCGTCGGCAAGCTCTC
CCCGGTGTATGGCGAGAGCATCTATCGCGGCGCCGGTGGCGAATGGGAGTTCGATCAACGCTGGAAACCGGTGCAGGGAA
TTCCTATGCGAGCCGGCACAGCCCGGGCCGTCCTGCTGGCTCAACGCCGCTTGCGGCGTGGATTAGGCATTCGCTGCCCG
ATTCTGATCGCGCATTCAGCACGCTCGGCCTGGCCCATCGCCGGCAGTCCAGAGGTCGGACGCGCCGATGTGGTTCTCGA
CGTGGCCCATATGCGTCGTGATGGCCCAAGCCTGGGGGATGATGTGACCATGATCGCAATTGATGGTGGACTGCACGATC
TGGCCCTCTCTCCTCCACCTGTCCGCGAACACTACTTTCGTGAGATGATGGCCTGGCTGGCAGAGGTAGCGGCGCGTCAA
CCGGTAACGTAA

Upstream 100 bases:

>100_bases
GTCACGGTGGGATTCTGGATCGCATCGATAGCATCCTCTTCACCGGGCCGGTTGTCTACTACATGATCGTATTGTTTACA
AGGTAAGGCAGGAACGGGTC

Downstream 100 bases:

>100_bases
AGCAGAGGGTACTTCATGCGGCAGTGGCTCATCGCGTTCACGATTATCCTGACCAGCCTGTTGCCATTTCCAGCCTATCC
ACTGCCGCCAGAGTTTTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: Lysophospholipase; Alpha/Beta Hydrolase Fold Family Protein; Hydrolase; Hydrolase Alpha/Beta Fold Family Protein; Lysophospholipase-Like Protein; Carboxylic Ester Hydrolase

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MITTITTSREQWTPDTALAGFETRSINLRSGRAVLIRQINPPNQGRAVLYVHGYSDYFFQAHLADVFRAHGYAFYAIDLP
GHGRAIETGQIPCFYRDITEFYPFLDAAINLIDAEQQQPWLVLHGHSAGGLITALYAAEGQQRERIGALVLNSPFFDFFI
DRVTRASIPLVMWLGRIQPTRVVGKLSPVYGESIYRGAGGEWEFDQRWKPVQGIPMRAGTARAVLLAQRRLRRGLGIRCP
ILIAHSARSAWPIAGSPEVGRADVVLDVAHMRRDGPSLGDDVTMIAIDGGLHDLALSPPPVREHYFREMMAWLAEVAARQ
PVT

Sequences:

>Translated_323_residues
MITTITTSREQWTPDTALAGFETRSINLRSGRAVLIRQINPPNQGRAVLYVHGYSDYFFQAHLADVFRAHGYAFYAIDLP
GHGRAIETGQIPCFYRDITEFYPFLDAAINLIDAEQQQPWLVLHGHSAGGLITALYAAEGQQRERIGALVLNSPFFDFFI
DRVTRASIPLVMWLGRIQPTRVVGKLSPVYGESIYRGAGGEWEFDQRWKPVQGIPMRAGTARAVLLAQRRLRRGLGIRCP
ILIAHSARSAWPIAGSPEVGRADVVLDVAHMRRDGPSLGDDVTMIAIDGGLHDLALSPPPVREHYFREMMAWLAEVAARQ
PVT
>Mature_323_residues
MITTITTSREQWTPDTALAGFETRSINLRSGRAVLIRQINPPNQGRAVLYVHGYSDYFFQAHLADVFRAHGYAFYAIDLP
GHGRAIETGQIPCFYRDITEFYPFLDAAINLIDAEQQQPWLVLHGHSAGGLITALYAAEGQQRERIGALVLNSPFFDFFI
DRVTRASIPLVMWLGRIQPTRVVGKLSPVYGESIYRGAGGEWEFDQRWKPVQGIPMRAGTARAVLLAQRRLRRGLGIRCP
ILIAHSARSAWPIAGSPEVGRADVVLDVAHMRRDGPSLGDDVTMIAIDGGLHDLALSPPPVREHYFREMMAWLAEVAARQ
PVT

Specific function: Unknown

COG id: COG2267

COG function: function code I; Lysophospholipase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35983; Mature: 35983

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITTITTSREQWTPDTALAGFETRSINLRSGRAVLIRQINPPNQGRAVLYVHGYSDYFFQ
CEEEEECCCCCCCCCHHHCCCEEEEEEECCCCEEEEEECCCCCCCCEEEEEECCCCHHHH
AHLADVFRAHGYAFYAIDLPGHGRAIETGQIPCFYRDITEFYPFLDAAINLIDAEQQQPW
HHHHHHHHHCCEEEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCE
LVLHGHSAGGLITALYAAEGQQRERIGALVLNSPFFDFFIDRVTRASIPLVMWLGRIQPT
EEEECCCCCCCEEEEEHHCCCHHHHHCEEEECCCHHHHHHHHHHHCCCCHHHHHCCCCHH
RVVGKLSPVYGESIYRGAGGEWEFDQRWKPVQGIPMRAGTARAVLLAQRRLRRGLGIRCP
HHHHCCCCHHCCHHHCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCE
ILIAHSARSAWPIAGSPEVGRADVVLDVAHMRRDGPSLGDDVTMIAIDGGLHDLALSPPP
EEEEECCCCCCCCCCCCCCCCCCEEEEHHHHHCCCCCCCCCEEEEEEECCCEECCCCCCC
VREHYFREMMAWLAEVAARQPVT
HHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MITTITTSREQWTPDTALAGFETRSINLRSGRAVLIRQINPPNQGRAVLYVHGYSDYFFQ
CEEEEECCCCCCCCCHHHCCCEEEEEEECCCCEEEEEECCCCCCCCEEEEEECCCCHHHH
AHLADVFRAHGYAFYAIDLPGHGRAIETGQIPCFYRDITEFYPFLDAAINLIDAEQQQPW
HHHHHHHHHCCEEEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCE
LVLHGHSAGGLITALYAAEGQQRERIGALVLNSPFFDFFIDRVTRASIPLVMWLGRIQPT
EEEECCCCCCCEEEEEHHCCCHHHHHCEEEECCCHHHHHHHHHHHCCCCHHHHHCCCCHH
RVVGKLSPVYGESIYRGAGGEWEFDQRWKPVQGIPMRAGTARAVLLAQRRLRRGLGIRCP
HHHHCCCCHHCCHHHCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCE
ILIAHSARSAWPIAGSPEVGRADVVLDVAHMRRDGPSLGDDVTMIAIDGGLHDLALSPPP
EEEEECCCCCCCCCCCCCCCCCCEEEEHHHHHCCCCCCCCCEEEEEEECCCEECCCCCCC
VREHYFREMMAWLAEVAARQPVT
HHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA