| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is acrR [C]
Identifier: 222527010
GI number: 222527010
Start: 4721157
End: 4721744
Strand: Direct
Name: acrR [C]
Synonym: Chy400_3789
Alternate gene names: 222527010
Gene position: 4721157-4721744 (Clockwise)
Preceding gene: 222527009
Following gene: 222527012
Centisome position: 89.6
GC content: 55.44
Gene sequence:
>588_bases ATGAGTCGACAACAACATTCAGAACAGATTCGCAATCGCATTATCGATGAGGCAGCACGCCTGATTGTGGCTTACGGCTA CGATGGCATTGCTATGCGCGAGATTGCTGAAGCAGTGGGTTTGTCGAAGGCCGGTCTCTATCACCATTTTCGCGACAAAG AAGATTTGCTGGTGGCAGTGCTCACCAACTGGGCCGATGAGATGGCTGCCCTGGTAGCGGCTGCGGAACGTCAGCCTGAC ACCCGTAGCCGGCTTTCCACGCTGATCCACGGGCTGTTTGCAAAAGCGCCGGCTCAACGCGCCCTGGTTCGGTTGAGTAA TCACGATCTCCCTCGCCTGAGCGCAACTGCTCGCGCCAGCGTCGAGCGCTGTTATGCCAATGGGTTGATTGAACCAATCT CAACAATGATTCGGAATGGTATCGAACGTGGGGAGTTACGACCGGTTGATCCGCACGCTGCAACCTGGTTGCTGCTGGGG ATGCTCTACCCGTTTTTTCACACCGATCAGGCACCGGCTGGCGAGCAGGGTCACGTAATTGCAGACCTGATCCTTACGAC CTTTTTCGATGGGTTAGCGCAACCATAG
Upstream 100 bases:
>100_bases GCACGACAGTACAGCTTTTTATGAAATAAGTTCTACACACGCTGCCACCAGGATGCGCTAAGATGAAGGAAACCCTGGTG TCAGCTTTACGGACAATGAT
Downstream 100 bases:
>100_bases CCTGCGGGTCAGGCAATGATGACACACGTATTACGACCCTGTGCTTTTGCCTGGTATAACGCACTGTCAGCACGTGCAAT CAGGTCATGCTCATCGGTCA
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Regulatory Protein TetR
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MSRQQHSEQIRNRIIDEAARLIVAYGYDGIAMREIAEAVGLSKAGLYHHFRDKEDLLVAVLTNWADEMAALVAAAERQPD TRSRLSTLIHGLFAKAPAQRALVRLSNHDLPRLSATARASVERCYANGLIEPISTMIRNGIERGELRPVDPHAATWLLLG MLYPFFHTDQAPAGEQGHVIADLILTTFFDGLAQP
Sequences:
>Translated_195_residues MSRQQHSEQIRNRIIDEAARLIVAYGYDGIAMREIAEAVGLSKAGLYHHFRDKEDLLVAVLTNWADEMAALVAAAERQPD TRSRLSTLIHGLFAKAPAQRALVRLSNHDLPRLSATARASVERCYANGLIEPISTMIRNGIERGELRPVDPHAATWLLLG MLYPFFHTDQAPAGEQGHVIADLILTTFFDGLAQP >Mature_194_residues SRQQHSEQIRNRIIDEAARLIVAYGYDGIAMREIAEAVGLSKAGLYHHFRDKEDLLVAVLTNWADEMAALVAAAERQPDT RSRLSTLIHGLFAKAPAQRALVRLSNHDLPRLSATARASVERCYANGLIEPISTMIRNGIERGELRPVDPHAATWLLLGM LYPFFHTDQAPAGEQGHVIADLILTTFFDGLAQP
Specific function: Potential Regulator Protein For The Acrab Genes. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21605; Mature: 21474
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRQQHSEQIRNRIIDEAARLIVAYGYDGIAMREIAEAVGLSKAGLYHHFRDKEDLLVAV CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHH LTNWADEMAALVAAAERQPDTRSRLSTLIHGLFAKAPAQRALVRLSNHDLPRLSATARAS HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHH VERCYANGLIEPISTMIRNGIERGELRPVDPHAATWLLLGMLYPFFHTDQAPAGEQGHVI HHHHHHCCCHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH ADLILTTFFDGLAQP HHHHHHHHHHHHCCC >Mature Secondary Structure SRQQHSEQIRNRIIDEAARLIVAYGYDGIAMREIAEAVGLSKAGLYHHFRDKEDLLVAV CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHH LTNWADEMAALVAAAERQPDTRSRLSTLIHGLFAKAPAQRALVRLSNHDLPRLSATARAS HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHH VERCYANGLIEPISTMIRNGIERGELRPVDPHAATWLLLGMLYPFFHTDQAPAGEQGHVI HHHHHHCCCHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH ADLILTTFFDGLAQP HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA