| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is sopA [C]
Identifier: 222527012
GI number: 222527012
Start: 4723066
End: 4724031
Strand: Direct
Name: sopA [C]
Synonym: Chy400_3791
Alternate gene names: 222527012
Gene position: 4723066-4724031 (Clockwise)
Preceding gene: 222527010
Following gene: 222527014
Centisome position: 89.64
GC content: 57.87
Gene sequence:
>966_bases ATGGCGCGGATCGTCGCCGTTATCAACTTGAAGGGTGGTATTGGCAAAACCACAACCGTCGTCAATGTCAGTGCCGGTCT GGCATTGAAAGGTGCGCGCGTCTTGCTCATTGACATCGATGCCCAGGGCAACCTGGCGATGGCGCTCGGTGTCCAACCGC GCCGCACCCTTTACGAGGCGATTGTTGAACATAAGCCGCTCACCGATTTGCGCATCACTGCCCGTCCCAATCTCGATCTG GTTGCCGCAAACGAAACGCTGTTGCTGGCGCACCAGGCCATTGCCGGGCGTGCGGATTGGGTACGGGTGCTTGAACACCT GGTACGCCCGCTACGCAACGAGTACGACTTTATCTTCTTCGATTGCGGTGGCTCTCTCACTGTGCTCAATCAAAATGCGT TGATCGCAGCCACTGATGTGATTATCCCGACGACGGTTGAGCCGTTTGCGGTGAAAGGGCTGGAAAAGCTGATCGCTCAG ATCGGTCGAGTGAAAGGTGGCACCGCCGTGGTGCGGGCCATCATCCCAACCATGGTAGACCCGCGTATGCGGCAATCGGT AGAACTGCTTGCCTACCTGAATCGCACCTACGGACGACTGGTTCTGCCACCGGTGCGCGTGAATGTACGGCTCTCCGAAG CCTCTGCCGTTGGTAAGACGATCTACGAGCACGATCCTCGTTCACGCGGTGCTCTCGACTATGCCCAGATTGTTGAACTA TTGAGTAAGGATTGGGATTTTCGCCCGGCTCGCCTGGTTGCCACCCCAAACGCAGGACAATCGCCGACCGTATCGTCAGC GGCTTCACCACTTGCACCATTGGTAACGGGGGGCGGAGAGGTACAAACCGACACCTGCCCCAACTGCAACCATCGGCTCC AGCGTGCTACCGTCGCCGGCTATCGTATTACCTACTGCACCAACTGCCGGTATCGCCGGCAAGAGCTAATCCGTGGTGAA CCGTAG
Upstream 100 bases:
>100_bases ACACCCGATTGAAGAACTTCATAGTGCCTCAGCTTGACAAGCAATCGCTGCTCTACTACACTGGCAACGCATTAAAGAGC GTCAATATCAGGAGCAAGGC
Downstream 100 bases:
>100_bases ATAACACCCATACCCACCCGGTACTACGAGTGATACGTTCACCAGCAAGCTCTGGCAATACCCCCTGACCGGACTGACGC CGGTAATAACATAGCGTACA
Product: cobyrinic acid ac-diamide synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MARIVAVINLKGGIGKTTTVVNVSAGLALKGARVLLIDIDAQGNLAMALGVQPRRTLYEAIVEHKPLTDLRITARPNLDL VAANETLLLAHQAIAGRADWVRVLEHLVRPLRNEYDFIFFDCGGSLTVLNQNALIAATDVIIPTTVEPFAVKGLEKLIAQ IGRVKGGTAVVRAIIPTMVDPRMRQSVELLAYLNRTYGRLVLPPVRVNVRLSEASAVGKTIYEHDPRSRGALDYAQIVEL LSKDWDFRPARLVATPNAGQSPTVSSAASPLAPLVTGGGEVQTDTCPNCNHRLQRATVAGYRITYCTNCRYRRQELIRGE P
Sequences:
>Translated_321_residues MARIVAVINLKGGIGKTTTVVNVSAGLALKGARVLLIDIDAQGNLAMALGVQPRRTLYEAIVEHKPLTDLRITARPNLDL VAANETLLLAHQAIAGRADWVRVLEHLVRPLRNEYDFIFFDCGGSLTVLNQNALIAATDVIIPTTVEPFAVKGLEKLIAQ IGRVKGGTAVVRAIIPTMVDPRMRQSVELLAYLNRTYGRLVLPPVRVNVRLSEASAVGKTIYEHDPRSRGALDYAQIVEL LSKDWDFRPARLVATPNAGQSPTVSSAASPLAPLVTGGGEVQTDTCPNCNHRLQRATVAGYRITYCTNCRYRRQELIRGE P >Mature_320_residues ARIVAVINLKGGIGKTTTVVNVSAGLALKGARVLLIDIDAQGNLAMALGVQPRRTLYEAIVEHKPLTDLRITARPNLDLV AANETLLLAHQAIAGRADWVRVLEHLVRPLRNEYDFIFFDCGGSLTVLNQNALIAATDVIIPTTVEPFAVKGLEKLIAQI GRVKGGTAVVRAIIPTMVDPRMRQSVELLAYLNRTYGRLVLPPVRVNVRLSEASAVGKTIYEHDPRSRGALDYAQIVELL SKDWDFRPARLVATPNAGQSPTVSSAASPLAPLVTGGGEVQTDTCPNCNHRLQRATVAGYRITYCTNCRYRRQELIRGEP
Specific function: This Protein Is Essential For Plasmid Partition. It Ensures The Proper Distribution Of Newly Replicated Plasmids To Daughter Cells During Cell Division. Sopa Is Trans-Acting. [C]
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis soj [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 34955; Mature: 34824
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARIVAVINLKGGIGKTTTVVNVSAGLALKGARVLLIDIDAQGNLAMALGVQPRRTLYEA CCEEEEEEEECCCCCCCEEEEEECCCEEECCCEEEEEEECCCCCEEEEECCCHHHHHHHH IVEHKPLTDLRITARPNLDLVAANETLLLAHQAIAGRADWVRVLEHLVRPLRNEYDFIFF HHCCCCCCCEEEEECCCEEEEECCCEEEEEHHHHCCHHHHHHHHHHHHHHHCCCCCEEEE DCGGSLTVLNQNALIAATDVIIPTTVEPFAVKGLEKLIAQIGRVKGGTAVVRAIIPTMVD ECCCEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC PRMRQSVELLAYLNRTYGRLVLPPVRVNVRLSEASAVGKTIYEHDPRSRGALDYAQIVEL HHHHHHHHHHHHHHHHCCEEEECCEEEEEEECCHHHHHHHHHHCCCCCCCCCCHHHHHHH LSKDWDFRPARLVATPNAGQSPTVSSAASPLAPLVTGGGEVQTDTCPNCNHRLQRATVAG HHCCCCCCCEEEEECCCCCCCCCCHHCCCCCCCEEECCCEEECCCCCCHHHHHHHHEECC YRITYCTNCRYRRQELIRGEP EEEEEEECCHHHHHHHHCCCC >Mature Secondary Structure ARIVAVINLKGGIGKTTTVVNVSAGLALKGARVLLIDIDAQGNLAMALGVQPRRTLYEA CEEEEEEEECCCCCCCEEEEEECCCEEECCCEEEEEEECCCCCEEEEECCCHHHHHHHH IVEHKPLTDLRITARPNLDLVAANETLLLAHQAIAGRADWVRVLEHLVRPLRNEYDFIFF HHCCCCCCCEEEEECCCEEEEECCCEEEEEHHHHCCHHHHHHHHHHHHHHHCCCCCEEEE DCGGSLTVLNQNALIAATDVIIPTTVEPFAVKGLEKLIAQIGRVKGGTAVVRAIIPTMVD ECCCEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC PRMRQSVELLAYLNRTYGRLVLPPVRVNVRLSEASAVGKTIYEHDPRSRGALDYAQIVEL HHHHHHHHHHHHHHHHCCEEEECCEEEEEEECCHHHHHHHHHHCCCCCCCCCCHHHHHHH LSKDWDFRPARLVATPNAGQSPTVSSAASPLAPLVTGGGEVQTDTCPNCNHRLQRATVAG HHCCCCCCCEEEEECCCCCCCCCCHHCCCCCCCEEECCCEEECCCCCCHHHHHHHHEECC YRITYCTNCRYRRQELIRGEP EEEEEEECCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12534463 [H]