| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526980
Identifier: 222526980
GI number: 222526980
Start: 4679513
End: 4680487
Strand: Direct
Name: 222526980
Synonym: Chy400_3758
Alternate gene names: NA
Gene position: 4679513-4680487 (Clockwise)
Preceding gene: 222526979
Following gene: 222526981
Centisome position: 88.81
GC content: 71.08
Gene sequence:
>975_bases GTGGGCTGTGGGGCGCGCCGGAGGCGCGCGCTCCCAGGGGATGCTGACAGGCCCCCACCCTACCCCGCCCCCGCCGGGGG CGGGGATCACCGGTGCAGGGGTGGCTCCCGCTGGCGCGAGCTGGTACAAAGTTGCGGTACACGGGTGGAAGCAGGCGTGG TGGACGAAGCGAGTTGGAGGCGCATGCTTCCAGGGGATAGCCCCCACCCTACCCCGCCCCCGCCTGGGGCGGGGATCACC GGTGCAGGGGTGGCTCCCGCTGGCGCGAGCTGGTACAAAGTTGCGGTACACGGGTGGAAGCAGGCGTGGTGGACGAAGCG AGTTGGAGGCGCATGCTTCCAGGGGATAGCCCCCACCCTCACCCGCCCCCGCTGGGGGCGGGGATCACTGGCGCAGGGTG GCTCCTGCTGGCGCGAGCTGGTGCAGGTGGTAAAGTGCGCCGGAGGTGCGCCCTCCCAGGGTGTCGTAGCAGGTGGTGAG CGCGCCGGAAGCGCATGCTTCCAGGGGATAGCCCCCACCCTCACCCGCCTTGCCGGGGGCGGAGATCACGGGTGCAGGGT GGCTCCCGCTGGCGCGAGCTGGTGCAAAGTTGCGGTACACGGGTGGAAGCAGGCGTGGTGGGTGAAGCGAGTTGGAAGCG CACGCTGCCAGGGGATAGCCCCATCCTCACCCGCTCCCGCCGGGGACGGGGATCACCGGTGCAGGGTGGCTCCCGCTGGC GCGAGCTGGTGCAAAGTTGCGGTACACGGGTGGAAGCAGGCGCGGTGGGCTGTGGGGCGCGCCGGAAGCGCGTGCTTCCA GGGGATAGCCCCCACCCTCACCCGCCCCCGCTGGGGGCGGGGATCACCAGTGCAGGGTGGCTCCCGCTGGCGCGAGCTGG TGCAGGTGGTGAAGTGTGCCGGATGTGCACGCTTCCAGGGGATAGACCCCACACTTACCCGCATCGCCGGGGGCGGGGAT GATAGGGTGCAATGA
Upstream 100 bases:
>100_bases GTCAGGCGTAATGGGACATCCTGATTGACACTGTGCATTACCGGCAGCAGGTGCGGTGGGCTGTGGGGCGCGCCGGAGGC GCGCGCTCCCAGGAGATGCG
Downstream 100 bases:
>100_bases CTGTTATTAAACCAGATTTGACATTATCGCCAATCCGTAGGATTGATATCCAACGAGTGTATATATGACGACTCTGCTCG ATCTTGTTGGTCAAACACCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MGCGARRRRALPGDADRPPPYPAPAGGGDHRCRGGSRWRELVQSCGTRVEAGVVDEASWRRMLPGDSPHPTPPPPGAGIT GAGVAPAGASWYKVAVHGWKQAWWTKRVGGACFQGIAPTLTRPRWGRGSLAQGGSCWRELVQVVKCAGGAPSQGVVAGGE RAGSACFQGIAPTLTRLAGGGDHGCRVAPAGASWCKVAVHGWKQAWWVKRVGSARCQGIAPSSPAPAGDGDHRCRVAPAG ASWCKVAVHGWKQARWAVGRAGSACFQGIAPTLTRPRWGRGSPVQGGSRWRELVQVVKCAGCARFQGIDPTLTRIAGGGD DRVQ
Sequences:
>Translated_324_residues MGCGARRRRALPGDADRPPPYPAPAGGGDHRCRGGSRWRELVQSCGTRVEAGVVDEASWRRMLPGDSPHPTPPPPGAGIT GAGVAPAGASWYKVAVHGWKQAWWTKRVGGACFQGIAPTLTRPRWGRGSLAQGGSCWRELVQVVKCAGGAPSQGVVAGGE RAGSACFQGIAPTLTRLAGGGDHGCRVAPAGASWCKVAVHGWKQAWWVKRVGSARCQGIAPSSPAPAGDGDHRCRVAPAG ASWCKVAVHGWKQARWAVGRAGSACFQGIAPTLTRPRWGRGSPVQGGSRWRELVQVVKCAGCARFQGIDPTLTRIAGGGD DRVQ >Mature_323_residues GCGARRRRALPGDADRPPPYPAPAGGGDHRCRGGSRWRELVQSCGTRVEAGVVDEASWRRMLPGDSPHPTPPPPGAGITG AGVAPAGASWYKVAVHGWKQAWWTKRVGGACFQGIAPTLTRPRWGRGSLAQGGSCWRELVQVVKCAGGAPSQGVVAGGER AGSACFQGIAPTLTRLAGGGDHGCRVAPAGASWCKVAVHGWKQAWWVKRVGSARCQGIAPSSPAPAGDGDHRCRVAPAGA SWCKVAVHGWKQARWAVGRAGSACFQGIAPTLTRPRWGRGSPVQGGSRWRELVQVVKCAGCARFQGIDPTLTRIAGGGDD RVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33789; Mature: 33657
Theoretical pI: Translated: 11.25; Mature: 11.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGCGARRRRALPGDADRPPPYPAPAGGGDHRCRGGSRWRELVQSCGTRVEAGVVDEASWR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEECCCCCCCHHHH RMLPGDSPHPTPPPPGAGITGAGVAPAGASWYKVAVHGWKQAWWTKRVGGACFQGIAPTL HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCHHH TRPRWGRGSLAQGGSCWRELVQVVKCAGGAPSQGVVAGGERAGSACFQGIAPTLTRLAGG CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCC GDHGCRVAPAGASWCKVAVHGWKQAWWVKRVGSARCQGIAPSSPAPAGDGDHRCRVAPAG CCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCC ASWCKVAVHGWKQARWAVGRAGSACFQGIAPTLTRPRWGRGSPVQGGSRWRELVQVVKCA CHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH GCARFQGIDPTLTRIAGGGDDRVQ CHHHHCCCCHHHHHHCCCCCCCCC >Mature Secondary Structure GCGARRRRALPGDADRPPPYPAPAGGGDHRCRGGSRWRELVQSCGTRVEAGVVDEASWR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEECCCCCCCHHHH RMLPGDSPHPTPPPPGAGITGAGVAPAGASWYKVAVHGWKQAWWTKRVGGACFQGIAPTL HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCHHH TRPRWGRGSLAQGGSCWRELVQVVKCAGGAPSQGVVAGGERAGSACFQGIAPTLTRLAGG CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCC GDHGCRVAPAGASWCKVAVHGWKQAWWVKRVGSARCQGIAPSSPAPAGDGDHRCRVAPAG CCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCC ASWCKVAVHGWKQARWAVGRAGSACFQGIAPTLTRPRWGRGSPVQGGSRWRELVQVVKCA CHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH GCARFQGIDPTLTRIAGGGDDRVQ CHHHHCCCCHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA