Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222526980

Identifier: 222526980

GI number: 222526980

Start: 4679513

End: 4680487

Strand: Direct

Name: 222526980

Synonym: Chy400_3758

Alternate gene names: NA

Gene position: 4679513-4680487 (Clockwise)

Preceding gene: 222526979

Following gene: 222526981

Centisome position: 88.81

GC content: 71.08

Gene sequence:

>975_bases
GTGGGCTGTGGGGCGCGCCGGAGGCGCGCGCTCCCAGGGGATGCTGACAGGCCCCCACCCTACCCCGCCCCCGCCGGGGG
CGGGGATCACCGGTGCAGGGGTGGCTCCCGCTGGCGCGAGCTGGTACAAAGTTGCGGTACACGGGTGGAAGCAGGCGTGG
TGGACGAAGCGAGTTGGAGGCGCATGCTTCCAGGGGATAGCCCCCACCCTACCCCGCCCCCGCCTGGGGCGGGGATCACC
GGTGCAGGGGTGGCTCCCGCTGGCGCGAGCTGGTACAAAGTTGCGGTACACGGGTGGAAGCAGGCGTGGTGGACGAAGCG
AGTTGGAGGCGCATGCTTCCAGGGGATAGCCCCCACCCTCACCCGCCCCCGCTGGGGGCGGGGATCACTGGCGCAGGGTG
GCTCCTGCTGGCGCGAGCTGGTGCAGGTGGTAAAGTGCGCCGGAGGTGCGCCCTCCCAGGGTGTCGTAGCAGGTGGTGAG
CGCGCCGGAAGCGCATGCTTCCAGGGGATAGCCCCCACCCTCACCCGCCTTGCCGGGGGCGGAGATCACGGGTGCAGGGT
GGCTCCCGCTGGCGCGAGCTGGTGCAAAGTTGCGGTACACGGGTGGAAGCAGGCGTGGTGGGTGAAGCGAGTTGGAAGCG
CACGCTGCCAGGGGATAGCCCCATCCTCACCCGCTCCCGCCGGGGACGGGGATCACCGGTGCAGGGTGGCTCCCGCTGGC
GCGAGCTGGTGCAAAGTTGCGGTACACGGGTGGAAGCAGGCGCGGTGGGCTGTGGGGCGCGCCGGAAGCGCGTGCTTCCA
GGGGATAGCCCCCACCCTCACCCGCCCCCGCTGGGGGCGGGGATCACCAGTGCAGGGTGGCTCCCGCTGGCGCGAGCTGG
TGCAGGTGGTGAAGTGTGCCGGATGTGCACGCTTCCAGGGGATAGACCCCACACTTACCCGCATCGCCGGGGGCGGGGAT
GATAGGGTGCAATGA

Upstream 100 bases:

>100_bases
GTCAGGCGTAATGGGACATCCTGATTGACACTGTGCATTACCGGCAGCAGGTGCGGTGGGCTGTGGGGCGCGCCGGAGGC
GCGCGCTCCCAGGAGATGCG

Downstream 100 bases:

>100_bases
CTGTTATTAAACCAGATTTGACATTATCGCCAATCCGTAGGATTGATATCCAACGAGTGTATATATGACGACTCTGCTCG
ATCTTGTTGGTCAAACACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MGCGARRRRALPGDADRPPPYPAPAGGGDHRCRGGSRWRELVQSCGTRVEAGVVDEASWRRMLPGDSPHPTPPPPGAGIT
GAGVAPAGASWYKVAVHGWKQAWWTKRVGGACFQGIAPTLTRPRWGRGSLAQGGSCWRELVQVVKCAGGAPSQGVVAGGE
RAGSACFQGIAPTLTRLAGGGDHGCRVAPAGASWCKVAVHGWKQAWWVKRVGSARCQGIAPSSPAPAGDGDHRCRVAPAG
ASWCKVAVHGWKQARWAVGRAGSACFQGIAPTLTRPRWGRGSPVQGGSRWRELVQVVKCAGCARFQGIDPTLTRIAGGGD
DRVQ

Sequences:

>Translated_324_residues
MGCGARRRRALPGDADRPPPYPAPAGGGDHRCRGGSRWRELVQSCGTRVEAGVVDEASWRRMLPGDSPHPTPPPPGAGIT
GAGVAPAGASWYKVAVHGWKQAWWTKRVGGACFQGIAPTLTRPRWGRGSLAQGGSCWRELVQVVKCAGGAPSQGVVAGGE
RAGSACFQGIAPTLTRLAGGGDHGCRVAPAGASWCKVAVHGWKQAWWVKRVGSARCQGIAPSSPAPAGDGDHRCRVAPAG
ASWCKVAVHGWKQARWAVGRAGSACFQGIAPTLTRPRWGRGSPVQGGSRWRELVQVVKCAGCARFQGIDPTLTRIAGGGD
DRVQ
>Mature_323_residues
GCGARRRRALPGDADRPPPYPAPAGGGDHRCRGGSRWRELVQSCGTRVEAGVVDEASWRRMLPGDSPHPTPPPPGAGITG
AGVAPAGASWYKVAVHGWKQAWWTKRVGGACFQGIAPTLTRPRWGRGSLAQGGSCWRELVQVVKCAGGAPSQGVVAGGER
AGSACFQGIAPTLTRLAGGGDHGCRVAPAGASWCKVAVHGWKQAWWVKRVGSARCQGIAPSSPAPAGDGDHRCRVAPAGA
SWCKVAVHGWKQARWAVGRAGSACFQGIAPTLTRPRWGRGSPVQGGSRWRELVQVVKCAGCARFQGIDPTLTRIAGGGDD
RVQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33789; Mature: 33657

Theoretical pI: Translated: 11.25; Mature: 11.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGCGARRRRALPGDADRPPPYPAPAGGGDHRCRGGSRWRELVQSCGTRVEAGVVDEASWR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEECCCCCCCHHHH
RMLPGDSPHPTPPPPGAGITGAGVAPAGASWYKVAVHGWKQAWWTKRVGGACFQGIAPTL
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCHHH
TRPRWGRGSLAQGGSCWRELVQVVKCAGGAPSQGVVAGGERAGSACFQGIAPTLTRLAGG
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCC
GDHGCRVAPAGASWCKVAVHGWKQAWWVKRVGSARCQGIAPSSPAPAGDGDHRCRVAPAG
CCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCC
ASWCKVAVHGWKQARWAVGRAGSACFQGIAPTLTRPRWGRGSPVQGGSRWRELVQVVKCA
CHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
GCARFQGIDPTLTRIAGGGDDRVQ
CHHHHCCCCHHHHHHCCCCCCCCC
>Mature Secondary Structure 
GCGARRRRALPGDADRPPPYPAPAGGGDHRCRGGSRWRELVQSCGTRVEAGVVDEASWR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEECCCCCCCHHHH
RMLPGDSPHPTPPPPGAGITGAGVAPAGASWYKVAVHGWKQAWWTKRVGGACFQGIAPTL
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCHHH
TRPRWGRGSLAQGGSCWRELVQVVKCAGGAPSQGVVAGGERAGSACFQGIAPTLTRLAGG
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCC
GDHGCRVAPAGASWCKVAVHGWKQAWWVKRVGSARCQGIAPSSPAPAGDGDHRCRVAPAG
CCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCC
ASWCKVAVHGWKQARWAVGRAGSACFQGIAPTLTRPRWGRGSPVQGGSRWRELVQVVKCA
CHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
GCARFQGIDPTLTRIAGGGDDRVQ
CHHHHCCCCHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA