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The map label for this gene is nifU [C]

Identifier: 222526979

GI number: 222526979

Start: 4679031

End: 4679423

Strand: Direct

Name: nifU [C]

Synonym: Chy400_3757

Alternate gene names: 222526979

Gene position: 4679031-4679423 (Clockwise)

Preceding gene: 222526978

Following gene: 222526980

Centisome position: 88.8

GC content: 56.49

Gene sequence:

>393_bases
GTGTCTGAACCAGTTTCACACCAGGATGCAATCGAACGTCTGCTCGATCATTACCGCCAGCCTCGTCACTACGGCGAGCT
GCCCGATGCGATAACCTACAGCGGTGGTGTACCTGATTGTGGTGATACGCTCACCGTCTATCTGCGGGTTGCGCCCAACG
GCCGGCTTACCGATTTGCAATTTACCGGTCAGGGGTGTAGTGTCAGTGTTGGCACAGCATCAATCCTGATCGAGCAGTTG
CAGGGGGCAACGGTAGCCGATCTGCTGGCACTCGACGAAACAGCAGCAGTGCAGATTGTGGGAAGTGAGGTCTTTCAGGC
CCGGCCCCATTGTGCTACCCTGATATTCAGAACGTTAAAGGCCGCAGCACGACTGGTCGAGCGTCAGGCGTAA

Upstream 100 bases:

>100_bases
TACGCACGCCGGAGTTATTGATACGACACCACGTCGTAATCGGCGTACAATGAAGAGTAACGGCAGAGTGAAATCGCTGC
TACCATGGAGATGACAATCG

Downstream 100 bases:

>100_bases
TGGGACATCCTGATTGACACTGTGCATTACCGGCAGCAGGTGCGGTGGGCTGTGGGGCGCGCCGGAGGCGCGCGCTCCCA
GGAGATGCGGTGGGCTGTGG

Product: nitrogen-fixing NifU domain-containing protein

Products: NA

Alternate protein names: Nitrogen-Fixing NifU Domain Protein; NifU Domain-Containing Protein; NifU Family SUF System FeS Assembly Protein; Nitrogen Fixation Protein NifU; Homolog Nitrogen Fixation Protein NifU; SUF System FeS Assembly Protein; NifU Family Protein; Suf System Fes Assembly Protein Nifu Family; NifU Protein; Scaffold Protein; Nitrogen-Fixing NifU-Like Protein; Fes Cluster Assembly Scaffold Protein Nifu; Nitrogen-Fixing NifU Domain-Containing Protein; Iron-Sulfur Cluster Assembly Protein; FeS Assembly Protein; FeS Assembly Protein SufA; Iron Sulfur Cluster Assembly Protein; Iron-Sulfur Cluster Biosynthesis Protein IscU; NifU-Like Protein; FeS Cluster Assembly Scaffold IscU; Fe-S Cluster Assembly Protein NifU

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MSEPVSHQDAIERLLDHYRQPRHYGELPDAITYSGGVPDCGDTLTVYLRVAPNGRLTDLQFTGQGCSVSVGTASILIEQL
QGATVADLLALDETAAVQIVGSEVFQARPHCATLIFRTLKAAARLVERQA

Sequences:

>Translated_130_residues
MSEPVSHQDAIERLLDHYRQPRHYGELPDAITYSGGVPDCGDTLTVYLRVAPNGRLTDLQFTGQGCSVSVGTASILIEQL
QGATVADLLALDETAAVQIVGSEVFQARPHCATLIFRTLKAAARLVERQA
>Mature_129_residues
SEPVSHQDAIERLLDHYRQPRHYGELPDAITYSGGVPDCGDTLTVYLRVAPNGRLTDLQFTGQGCSVSVGTASILIEQLQ
GATVADLLALDETAAVQIVGSEVFQARPHCATLIFRTLKAAARLVERQA

Specific function: May Be Involved In The Formation Or Repair Of [Fe-S] Clusters Present In Iron-Sulfur Proteins (Potential). [C]

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14034; Mature: 13903

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEPVSHQDAIERLLDHYRQPRHYGELPDAITYSGGVPDCGDTLTVYLRVAPNGRLTDLQ
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCEEEEEEEECCCCCEEEEE
FTGQGCSVSVGTASILIEQLQGATVADLLALDETAAVQIVGSEVFQARPHCATLIFRTLK
ECCCCCEEEHHHHHHHHHHHCCCHHHHHHHHCCHHHEEEECHHHHHCCCHHHHHHHHHHH
AAARLVERQA
HHHHHHHCCC
>Mature Secondary Structure 
SEPVSHQDAIERLLDHYRQPRHYGELPDAITYSGGVPDCGDTLTVYLRVAPNGRLTDLQ
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCEEEEEEEECCCCCEEEEE
FTGQGCSVSVGTASILIEQLQGATVADLLALDETAAVQIVGSEVFQARPHCATLIFRTLK
ECCCCCEEEHHHHHHHHHHHCCCHHHHHHHHCCHHHEEEECHHHHHCCCHHHHHHHHHHH
AAARLVERQA
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA