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The map label for this gene is 222526968

Identifier: 222526968

GI number: 222526968

Start: 4668348

End: 4669196

Strand: Direct

Name: 222526968

Synonym: Chy400_3746

Alternate gene names: NA

Gene position: 4668348-4669196 (Clockwise)

Preceding gene: 222526967

Following gene: 222526969

Centisome position: 88.6

GC content: 57.95

Gene sequence:

>849_bases
ATGACTGAATCGACGATGACGGCTGCTGAATTGACTGCTGCCGGAAGAGCGGCATTAATCGCCGGCGACACCGTAACTGC
ACGGTTGCGGTTTCGCGAAGCGCTCGAAATTGATCCCAACTACGTGGAAGCGCTTCTGGGGATGGCCGCCGCCGTGCGGC
CATATCGCGACAAGCGTGAGTACCTTCTGCGCGCACTGGCAATTGATCCCAACCTGGCCGAAGCACGAGCAACTCTGGAA
CAGGTAGAGGCAAGACTGGCAGCGGGTGAATTACTCGCACCCACCGGCGTACAGGTGCGTGAGCAGAGTGAGACCGCGGT
CGTTACAGAACCTTCTGAATCACCAGCACCGCCTGAAACGGAGACGCTATTCTGCTATCGCCATCCGCAACGCGAAACCG
GGTTGCGCTGTATTAGTTGTAGTCGTCCGATTTGTCCAGAGTGTGCCCGCGCTACGCCGGTCGGCCAGATCTGCCCGGAC
TGTGCCCGAGAGCGGATGCCGGTGAACTATCAGGTAGCTCCCATACAGTTACTGATCGCCGGAATTGTTGCGCTTTTGTA
CGGGGTGATCGTCACCTTTGTTGCCGGGGTCGTGATTGGCTGGGCTGGATTTTTTGGCTTCATTGTCGCCTTCCTGCTCG
GCCCGATGACCGGCAATGCGCTTGCTCGCCTGATCGACTGGGCGACCGGACGTAAGCGAGGCCGCCTGCTCATGGTTGTG
GTAAGCGTCGCTTACTCGTGCGGTTCACTGCCGTACATTGGACTGATCATCTTATTGGGAGGTTTTCCACTCGTCTTGCT
CTTCTACTCGATCATTGTGGTAACCACAGCGCTGGCGTGGCTGCGTTGA

Upstream 100 bases:

>100_bases
TTTACGCCTAATCTCCTGTGGGAACCGATCCTGCGTCGGATTTATGAGGCACCTGCGCCAGCCGATGCACCATGCTACTT
TTTTGTTCTGCGGAGGCGTC

Downstream 100 bases:

>100_bases
TAACAATTTCCTCATCATCAACCAAACGCAGGGGATAGTGGTACAATAAAGCTACATATTATCGTTTAAGAGTAGGAACA
TTGGCCCTGCGCGGGTGAGA

Product: tetratricopeptide repeat-containing protein

Products: NA

Alternate protein names: TPR Repeat-Containing Protein

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MTESTMTAAELTAAGRAALIAGDTVTARLRFREALEIDPNYVEALLGMAAAVRPYRDKREYLLRALAIDPNLAEARATLE
QVEARLAAGELLAPTGVQVREQSETAVVTEPSESPAPPETETLFCYRHPQRETGLRCISCSRPICPECARATPVGQICPD
CARERMPVNYQVAPIQLLIAGIVALLYGVIVTFVAGVVIGWAGFFGFIVAFLLGPMTGNALARLIDWATGRKRGRLLMVV
VSVAYSCGSLPYIGLIILLGGFPLVLLFYSIIVVTTALAWLR

Sequences:

>Translated_282_residues
MTESTMTAAELTAAGRAALIAGDTVTARLRFREALEIDPNYVEALLGMAAAVRPYRDKREYLLRALAIDPNLAEARATLE
QVEARLAAGELLAPTGVQVREQSETAVVTEPSESPAPPETETLFCYRHPQRETGLRCISCSRPICPECARATPVGQICPD
CARERMPVNYQVAPIQLLIAGIVALLYGVIVTFVAGVVIGWAGFFGFIVAFLLGPMTGNALARLIDWATGRKRGRLLMVV
VSVAYSCGSLPYIGLIILLGGFPLVLLFYSIIVVTTALAWLR
>Mature_281_residues
TESTMTAAELTAAGRAALIAGDTVTARLRFREALEIDPNYVEALLGMAAAVRPYRDKREYLLRALAIDPNLAEARATLEQ
VEARLAAGELLAPTGVQVREQSETAVVTEPSESPAPPETETLFCYRHPQRETGLRCISCSRPICPECARATPVGQICPDC
ARERMPVNYQVAPIQLLIAGIVALLYGVIVTFVAGVVIGWAGFFGFIVAFLLGPMTGNALARLIDWATGRKRGRLLMVVV
SVAYSCGSLPYIGLIILLGGFPLVLLFYSIIVVTTALAWLR

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30451; Mature: 30320

Theoretical pI: Translated: 6.99; Mature: 6.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTESTMTAAELTAAGRAALIAGDTVTARLRFREALEIDPNYVEALLGMAAAVRPYRDKRE
CCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHH
YLLRALAIDPNLAEARATLEQVEARLAAGELLAPTGVQVREQSETAVVTEPSESPAPPET
HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCEEEECCCCCCCCCCC
ETLFCYRHPQRETGLRCISCSRPICPECARATPVGQICPDCARERMPVNYQVAPIQLLIA
CEEEEEECCCHHHCCEEEECCCCCCCHHHCCCCCHHCCHHHHHHCCCCCEEHHHHHHHHH
GIVALLYGVIVTFVAGVVIGWAGFFGFIVAFLLGPMTGNALARLIDWATGRKRGRLLMVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHH
VSVAYSCGSLPYIGLIILLGGFPLVLLFYSIIVVTTALAWLR
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TESTMTAAELTAAGRAALIAGDTVTARLRFREALEIDPNYVEALLGMAAAVRPYRDKRE
CCCHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHH
YLLRALAIDPNLAEARATLEQVEARLAAGELLAPTGVQVREQSETAVVTEPSESPAPPET
HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCEEEECCCCCCCCCCC
ETLFCYRHPQRETGLRCISCSRPICPECARATPVGQICPDCARERMPVNYQVAPIQLLIA
CEEEEEECCCHHHCCEEEECCCCCCCHHHCCCCCHHCCHHHHHHCCCCCEEHHHHHHHHH
GIVALLYGVIVTFVAGVVIGWAGFFGFIVAFLLGPMTGNALARLIDWATGRKRGRLLMVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHH
VSVAYSCGSLPYIGLIILLGGFPLVLLFYSIIVVTTALAWLR
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA