Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
---|---|
Accession | NC_012032 |
Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is rrmA [C]
Identifier: 222526967
GI number: 222526967
Start: 4667567
End: 4668355
Strand: Direct
Name: rrmA [C]
Synonym: Chy400_3745
Alternate gene names: 222526967
Gene position: 4667567-4668355 (Clockwise)
Preceding gene: 222526966
Following gene: 222526968
Centisome position: 88.59
GC content: 52.72
Gene sequence:
>789_bases ATGCCTGACTACTTACGACCACATTTGCTCACATTGCCCATACATCGGGCGATGATCCGTTCTATAGAAGCACGACTGTT TGCTGAACTGGCACCTGATTTGCCGGAACCCATCCTTGATATTGGCTCCGGTGACGGAACATTTGTTCAGATTTCTCTGC CCAACAAGCGGATCATTGGTATTGATCCACGCAAAGCCGACACGCACGAAGCGGCACGGCGAGGTGTTTATGCAGCATTG TGTGTGGCCGATGGTGCTGCCCTACCGTTCGCTGATCAATCGTTTGCTGCGGCAATCTCAAATTGTGTGCTTGAACACGT ACAGCCGCTTGATCAAACCCTACGGGAAGTGGCACGAGTTGTTCGTCCTGGAGCCCCGTTTGTTGCCTCAGTCGTGGGTG ATCGTTTCCCACGGGAATTACTCGGCACGTGGCTGCTTGATCGGTTGGGATTTGATGGTAGTAGCATCTATGGACGCTGG TTCAACCGTATTTCATATCATTACAACACGCTCAGCAGAGCTGAATGGACAGAACGCTTTACCCGTGCAGGCTTCACCGT AGAGGTCTGCCGACCATATATGAGTGATGCAGCCCTAAAGTTGTTTGATCTCAGTCACTACTACGGTGCGCCGAGCCTGA TCACACGTGCGCTAACGGGGCGCTGGTTGATAGCACCACCCTTTACGCCTAATCTCCTGTGGGAACCGATCCTGCGTCGG ATTTATGAGGCACCTGCGCCAGCCGATGCACCATGCTACTTTTTTGTTCTGCGGAGGCGTCATGACTGA
Upstream 100 bases:
>100_bases CGTCATTGAATACGAGAACCTCTTCCGCCAGTTAGGAGTCGCCGACCGGGTATGAACGCGGTACAATACCTTCGATAGAC TCTCGATGAAGGTTGCTGAT
Downstream 100 bases:
>100_bases ATCGACGATGACGGCTGCTGAATTGACTGCTGCCGGAAGAGCGGCATTAATCGCCGGCGACACCGTAACTGCACGGTTGC GGTTTCGCGAAGCGCTCGAA
Product: type 11 methyltransferase
Products: S-adenosyl-L-homocysteine +rRNA containing Nmethylguanine [C]
Alternate protein names: SAM-Dependent Methyltransferase; Methyltransferase Domain Family
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MPDYLRPHLLTLPIHRAMIRSIEARLFAELAPDLPEPILDIGSGDGTFVQISLPNKRIIGIDPRKADTHEAARRGVYAAL CVADGAALPFADQSFAAAISNCVLEHVQPLDQTLREVARVVRPGAPFVASVVGDRFPRELLGTWLLDRLGFDGSSIYGRW FNRISYHYNTLSRAEWTERFTRAGFTVEVCRPYMSDAALKLFDLSHYYGAPSLITRALTGRWLIAPPFTPNLLWEPILRR IYEAPAPADAPCYFFVLRRRHD
Sequences:
>Translated_262_residues MPDYLRPHLLTLPIHRAMIRSIEARLFAELAPDLPEPILDIGSGDGTFVQISLPNKRIIGIDPRKADTHEAARRGVYAAL CVADGAALPFADQSFAAAISNCVLEHVQPLDQTLREVARVVRPGAPFVASVVGDRFPRELLGTWLLDRLGFDGSSIYGRW FNRISYHYNTLSRAEWTERFTRAGFTVEVCRPYMSDAALKLFDLSHYYGAPSLITRALTGRWLIAPPFTPNLLWEPILRR IYEAPAPADAPCYFFVLRRRHD >Mature_261_residues PDYLRPHLLTLPIHRAMIRSIEARLFAELAPDLPEPILDIGSGDGTFVQISLPNKRIIGIDPRKADTHEAARRGVYAALC VADGAALPFADQSFAAAISNCVLEHVQPLDQTLREVARVVRPGAPFVASVVGDRFPRELLGTWLLDRLGFDGSSIYGRWF NRISYHYNTLSRAEWTERFTRAGFTVEVCRPYMSDAALKLFDLSHYYGAPSLITRALTGRWLIAPPFTPNLLWEPILRRI YEAPAPADAPCYFFVLRRRHD
Specific function: Specifically Methylates The Guanosine In Position 745 Of 23s rRNA. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.1.1.51 [C]
Molecular weight: Translated: 29546; Mature: 29415
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDYLRPHLLTLPIHRAMIRSIEARLFAELAPDLPEPILDIGSGDGTFVQISLPNKRIIG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEEECCCCEEEE IDPRKADTHEAARRGVYAALCVADGAALPFADQSFAAAISNCVLEHVQPLDQTLREVARV CCCCCCCHHHHHHCCHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRPGAPFVASVVGDRFPRELLGTWLLDRLGFDGSSIYGRWFNRISYHYNTLSRAEWTERF HCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH TRAGFTVEVCRPYMSDAALKLFDLSHYYGAPSLITRALTGRWLIAPPFTPNLLWEPILRR HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEECCCCCCHHHHHHHHHH IYEAPAPADAPCYFFVLRRRHD HHCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure PDYLRPHLLTLPIHRAMIRSIEARLFAELAPDLPEPILDIGSGDGTFVQISLPNKRIIG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEEECCCCEEEE IDPRKADTHEAARRGVYAALCVADGAALPFADQSFAAAISNCVLEHVQPLDQTLREVARV CCCCCCCHHHHHHCCHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRPGAPFVASVVGDRFPRELLGTWLLDRLGFDGSSIYGRWFNRISYHYNTLSRAEWTERF HCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH TRAGFTVEVCRPYMSDAALKLFDLSHYYGAPSLITRALTGRWLIAPPFTPNLLWEPILRR HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEECCCCCCHHHHHHHHHH IYEAPAPADAPCYFFVLRRRHD HHCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: Unidentified protein factor B [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-Adenosyl-L-methionine; rRNA [C]
Specific reaction: S-Adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine +rRNA containing Nmethylguanine [C]
General reaction: Methyl group transfer [C]
Inhibitor: Mg2+; Unidentified protein factor A1 [C]
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA