Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is pimA [H]

Identifier: 222526966

GI number: 222526966

Start: 4666367

End: 4667521

Strand: Direct

Name: pimA [H]

Synonym: Chy400_3744

Alternate gene names: 222526966

Gene position: 4666367-4667521 (Clockwise)

Preceding gene: 222526965

Following gene: 222526967

Centisome position: 88.56

GC content: 57.14

Gene sequence:

>1155_bases
ATGCGAATACTCTGTGCCCTGACCTACTATCGTCCCTACACCAGTGGTCTTACCATCTATGTTGAACGACTGGCTCGTGG
CCTGGCCCGTCGTGGTCATCAGGTGACGGTGCTGACCTCGCAGTACGATCCGAGTCTGCCAAAGCTTGAATGGCTCGATG
GTGTGCGTGTGATTCGTGCCCCAGTCCTGGCCCGGATTAGCAAGGGTGTGCTGATGCCAACATTTGGCTGGCTGGCAACC
CGACTCGCTCTCGAACATGATGCGATGAGTCTCCATTTGCCGCAGTTTGATGCACCGGGACTGGCGTTACGCGGTCGTCT
CTTGAAACAGCCGGTTGTGCTGACATACCACAGTGACCTGAAATTACCCCCCGGTATGTTGAACCGGGTAGCCAATCGCG
TGGTTGACGTTGCCAATCAGGCGGCTGCTGCACTGGCAACTCGCATCGTAGCGTATACGCAGGACTTCGCCGATCACTCA
CCGTATCTTCGGCGCTGGCGCACAAAAGTGACTATCATCCCGCCGCCGGTTGAGGTAGCCGAGATTCCGGAGTCAGAGAT
TGACGCATTTCGCCGACGCTGGAATCTTCAGGGGCCGGTGATCGGCATGGCTGCCCGCCTGGCGGCTGAAAAAGGGGTTG
AAGTGCTGTTGGCAGCACTCCCGCGCATCCTGGCCGTGTATCCGACGGCACGTGTTCTCTTTGCCGGGCCGCACGAACAT
GTCCTCGGCGAAGAGGCATACGCTCGACGGCTGGCACCGCTATTTGCCCAATTTCGCGATCACTGGACATTTCTCGGCAC
CCTCGATCCACGGGAGATGGCAGCGTTTTTTCCAAATCTCGATGTACTGGTCGTGCCATCGCTCAACTCAACCGAAACCT
TTGGTCTGGTACAGGTCGAAGCAATGCTCTGCGGCACACCAACGGTTGCCAGTAACCTACCCGGTGTACGCCAGCCACCA
CTGATGACCGGTATGGGGAAGGTCGTCCCAATTGGCGATGCAACTGCGCTGGCCGAAGCTATTCTTGAGATTATTGGTAA
TCGCACCGCTTATGTACGGCCACGCGAAGAAATAGCAGCGCTCTTCAGTACAGAGCGTACCGTCATTGAATACGAGAACC
TCTTCCGCCAGTTAGGAGTCGCCGACCGGGTATGA

Upstream 100 bases:

>100_bases
TGCAAAACCGCCATTCGCGGGTTCGATTCCCGCCGTCGCCTCCAGATGAAGTCCGTAACGAGAGGTTAATTGCCTCTCGT
TCTTTGTTTCACGACAGAAC

Downstream 100 bases:

>100_bases
ACGCGGTACAATACCTTCGATAGACTCTCGATGAAGGTTGCTGATATGCCTGACTACTTACGACCACATTTGCTCACATT
GCCCATACATCGGGCGATGA

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: Alpha-mannosyltransferase; Guanosine diphosphomannose-phosphatidyl-inositol alpha-mannosyltransferase; Phosphatidylinositol alpha-mannosyltransferase; PI alpha-mannosyltransferase [H]

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MRILCALTYYRPYTSGLTIYVERLARGLARRGHQVTVLTSQYDPSLPKLEWLDGVRVIRAPVLARISKGVLMPTFGWLAT
RLALEHDAMSLHLPQFDAPGLALRGRLLKQPVVLTYHSDLKLPPGMLNRVANRVVDVANQAAAALATRIVAYTQDFADHS
PYLRRWRTKVTIIPPPVEVAEIPESEIDAFRRRWNLQGPVIGMAARLAAEKGVEVLLAALPRILAVYPTARVLFAGPHEH
VLGEEAYARRLAPLFAQFRDHWTFLGTLDPREMAAFFPNLDVLVVPSLNSTETFGLVQVEAMLCGTPTVASNLPGVRQPP
LMTGMGKVVPIGDATALAEAILEIIGNRTAYVRPREEIAALFSTERTVIEYENLFRQLGVADRV

Sequences:

>Translated_384_residues
MRILCALTYYRPYTSGLTIYVERLARGLARRGHQVTVLTSQYDPSLPKLEWLDGVRVIRAPVLARISKGVLMPTFGWLAT
RLALEHDAMSLHLPQFDAPGLALRGRLLKQPVVLTYHSDLKLPPGMLNRVANRVVDVANQAAAALATRIVAYTQDFADHS
PYLRRWRTKVTIIPPPVEVAEIPESEIDAFRRRWNLQGPVIGMAARLAAEKGVEVLLAALPRILAVYPTARVLFAGPHEH
VLGEEAYARRLAPLFAQFRDHWTFLGTLDPREMAAFFPNLDVLVVPSLNSTETFGLVQVEAMLCGTPTVASNLPGVRQPP
LMTGMGKVVPIGDATALAEAILEIIGNRTAYVRPREEIAALFSTERTVIEYENLFRQLGVADRV
>Mature_384_residues
MRILCALTYYRPYTSGLTIYVERLARGLARRGHQVTVLTSQYDPSLPKLEWLDGVRVIRAPVLARISKGVLMPTFGWLAT
RLALEHDAMSLHLPQFDAPGLALRGRLLKQPVVLTYHSDLKLPPGMLNRVANRVVDVANQAAAALATRIVAYTQDFADHS
PYLRRWRTKVTIIPPPVEVAEIPESEIDAFRRRWNLQGPVIGMAARLAAEKGVEVLLAALPRILAVYPTARVLFAGPHEH
VLGEEAYARRLAPLFAQFRDHWTFLGTLDPREMAAFFPNLDVLVVPSLNSTETFGLVQVEAMLCGTPTVASNLPGVRQPP
LMTGMGKVVPIGDATALAEAILEIIGNRTAYVRPREEIAALFSTERTVIEYENLFRQLGVADRV

Specific function: Catalyzes the addition of a mannose residue from GDP-D- mannose to the position 2 of a phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Contrary to pimB, the mannosyltransferase pim

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: =2.4.1.57 [H]

Molecular weight: Translated: 42577; Mature: 42577

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILCALTYYRPYTSGLTIYVERLARGLARRGHQVTVLTSQYDPSLPKLEWLDGVRVIRA
CEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHH
PVLARISKGVLMPTFGWLATRLALEHDAMSLHLPQFDAPGLALRGRLLKQPVVLTYHSDL
HHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHCCCEEEEECCCC
KLPPGMLNRVANRVVDVANQAAAALATRIVAYTQDFADHSPYLRRWRTKVTIIPPPVEVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCEEEEECCCCHHH
EIPESEIDAFRRRWNLQGPVIGMAARLAAEKGVEVLLAALPRILAVYPTARVLFAGPHEH
HCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHH
VLGEEAYARRLAPLFAQFRDHWTFLGTLDPREMAAFFPNLDVLVVPSLNSTETFGLVQVE
HCCHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHCCCCCEEEECCCCCCCCCCCEEEE
AMLCGTPTVASNLPGVRQPPLMTGMGKVVPIGDATALAEAILEIIGNRTAYVRPREEIAA
HHHCCCCHHHHCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCEEECCHHHHHH
LFSTERTVIEYENLFRQLGVADRV
HHHCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRILCALTYYRPYTSGLTIYVERLARGLARRGHQVTVLTSQYDPSLPKLEWLDGVRVIRA
CEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHH
PVLARISKGVLMPTFGWLATRLALEHDAMSLHLPQFDAPGLALRGRLLKQPVVLTYHSDL
HHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHCCCEEEEECCCC
KLPPGMLNRVANRVVDVANQAAAALATRIVAYTQDFADHSPYLRRWRTKVTIIPPPVEVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCEEEEECCCCHHH
EIPESEIDAFRRRWNLQGPVIGMAARLAAEKGVEVLLAALPRILAVYPTARVLFAGPHEH
HCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHH
VLGEEAYARRLAPLFAQFRDHWTFLGTLDPREMAAFFPNLDVLVVPSLNSTETFGLVQVE
HCCHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHCCCCCEEEECCCCCCCCCCCEEEE
AMLCGTPTVASNLPGVRQPPLMTGMGKVVPIGDATALAEAILEIIGNRTAYVRPREEIAA
HHHCCCCHHHHCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCEEECCHHHHHH
LFSTERTVIEYENLFRQLGVADRV
HHHCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12068013 [H]