| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is pimA [H]
Identifier: 222526966
GI number: 222526966
Start: 4666367
End: 4667521
Strand: Direct
Name: pimA [H]
Synonym: Chy400_3744
Alternate gene names: 222526966
Gene position: 4666367-4667521 (Clockwise)
Preceding gene: 222526965
Following gene: 222526967
Centisome position: 88.56
GC content: 57.14
Gene sequence:
>1155_bases ATGCGAATACTCTGTGCCCTGACCTACTATCGTCCCTACACCAGTGGTCTTACCATCTATGTTGAACGACTGGCTCGTGG CCTGGCCCGTCGTGGTCATCAGGTGACGGTGCTGACCTCGCAGTACGATCCGAGTCTGCCAAAGCTTGAATGGCTCGATG GTGTGCGTGTGATTCGTGCCCCAGTCCTGGCCCGGATTAGCAAGGGTGTGCTGATGCCAACATTTGGCTGGCTGGCAACC CGACTCGCTCTCGAACATGATGCGATGAGTCTCCATTTGCCGCAGTTTGATGCACCGGGACTGGCGTTACGCGGTCGTCT CTTGAAACAGCCGGTTGTGCTGACATACCACAGTGACCTGAAATTACCCCCCGGTATGTTGAACCGGGTAGCCAATCGCG TGGTTGACGTTGCCAATCAGGCGGCTGCTGCACTGGCAACTCGCATCGTAGCGTATACGCAGGACTTCGCCGATCACTCA CCGTATCTTCGGCGCTGGCGCACAAAAGTGACTATCATCCCGCCGCCGGTTGAGGTAGCCGAGATTCCGGAGTCAGAGAT TGACGCATTTCGCCGACGCTGGAATCTTCAGGGGCCGGTGATCGGCATGGCTGCCCGCCTGGCGGCTGAAAAAGGGGTTG AAGTGCTGTTGGCAGCACTCCCGCGCATCCTGGCCGTGTATCCGACGGCACGTGTTCTCTTTGCCGGGCCGCACGAACAT GTCCTCGGCGAAGAGGCATACGCTCGACGGCTGGCACCGCTATTTGCCCAATTTCGCGATCACTGGACATTTCTCGGCAC CCTCGATCCACGGGAGATGGCAGCGTTTTTTCCAAATCTCGATGTACTGGTCGTGCCATCGCTCAACTCAACCGAAACCT TTGGTCTGGTACAGGTCGAAGCAATGCTCTGCGGCACACCAACGGTTGCCAGTAACCTACCCGGTGTACGCCAGCCACCA CTGATGACCGGTATGGGGAAGGTCGTCCCAATTGGCGATGCAACTGCGCTGGCCGAAGCTATTCTTGAGATTATTGGTAA TCGCACCGCTTATGTACGGCCACGCGAAGAAATAGCAGCGCTCTTCAGTACAGAGCGTACCGTCATTGAATACGAGAACC TCTTCCGCCAGTTAGGAGTCGCCGACCGGGTATGA
Upstream 100 bases:
>100_bases TGCAAAACCGCCATTCGCGGGTTCGATTCCCGCCGTCGCCTCCAGATGAAGTCCGTAACGAGAGGTTAATTGCCTCTCGT TCTTTGTTTCACGACAGAAC
Downstream 100 bases:
>100_bases ACGCGGTACAATACCTTCGATAGACTCTCGATGAAGGTTGCTGATATGCCTGACTACTTACGACCACATTTGCTCACATT GCCCATACATCGGGCGATGA
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: Alpha-mannosyltransferase; Guanosine diphosphomannose-phosphatidyl-inositol alpha-mannosyltransferase; Phosphatidylinositol alpha-mannosyltransferase; PI alpha-mannosyltransferase [H]
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MRILCALTYYRPYTSGLTIYVERLARGLARRGHQVTVLTSQYDPSLPKLEWLDGVRVIRAPVLARISKGVLMPTFGWLAT RLALEHDAMSLHLPQFDAPGLALRGRLLKQPVVLTYHSDLKLPPGMLNRVANRVVDVANQAAAALATRIVAYTQDFADHS PYLRRWRTKVTIIPPPVEVAEIPESEIDAFRRRWNLQGPVIGMAARLAAEKGVEVLLAALPRILAVYPTARVLFAGPHEH VLGEEAYARRLAPLFAQFRDHWTFLGTLDPREMAAFFPNLDVLVVPSLNSTETFGLVQVEAMLCGTPTVASNLPGVRQPP LMTGMGKVVPIGDATALAEAILEIIGNRTAYVRPREEIAALFSTERTVIEYENLFRQLGVADRV
Sequences:
>Translated_384_residues MRILCALTYYRPYTSGLTIYVERLARGLARRGHQVTVLTSQYDPSLPKLEWLDGVRVIRAPVLARISKGVLMPTFGWLAT RLALEHDAMSLHLPQFDAPGLALRGRLLKQPVVLTYHSDLKLPPGMLNRVANRVVDVANQAAAALATRIVAYTQDFADHS PYLRRWRTKVTIIPPPVEVAEIPESEIDAFRRRWNLQGPVIGMAARLAAEKGVEVLLAALPRILAVYPTARVLFAGPHEH VLGEEAYARRLAPLFAQFRDHWTFLGTLDPREMAAFFPNLDVLVVPSLNSTETFGLVQVEAMLCGTPTVASNLPGVRQPP LMTGMGKVVPIGDATALAEAILEIIGNRTAYVRPREEIAALFSTERTVIEYENLFRQLGVADRV >Mature_384_residues MRILCALTYYRPYTSGLTIYVERLARGLARRGHQVTVLTSQYDPSLPKLEWLDGVRVIRAPVLARISKGVLMPTFGWLAT RLALEHDAMSLHLPQFDAPGLALRGRLLKQPVVLTYHSDLKLPPGMLNRVANRVVDVANQAAAALATRIVAYTQDFADHS PYLRRWRTKVTIIPPPVEVAEIPESEIDAFRRRWNLQGPVIGMAARLAAEKGVEVLLAALPRILAVYPTARVLFAGPHEH VLGEEAYARRLAPLFAQFRDHWTFLGTLDPREMAAFFPNLDVLVVPSLNSTETFGLVQVEAMLCGTPTVASNLPGVRQPP LMTGMGKVVPIGDATALAEAILEIIGNRTAYVRPREEIAALFSTERTVIEYENLFRQLGVADRV
Specific function: Catalyzes the addition of a mannose residue from GDP-D- mannose to the position 2 of a phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Contrary to pimB, the mannosyltransferase pim
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: =2.4.1.57 [H]
Molecular weight: Translated: 42577; Mature: 42577
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILCALTYYRPYTSGLTIYVERLARGLARRGHQVTVLTSQYDPSLPKLEWLDGVRVIRA CEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHH PVLARISKGVLMPTFGWLATRLALEHDAMSLHLPQFDAPGLALRGRLLKQPVVLTYHSDL HHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHCCCEEEEECCCC KLPPGMLNRVANRVVDVANQAAAALATRIVAYTQDFADHSPYLRRWRTKVTIIPPPVEVA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCEEEEECCCCHHH EIPESEIDAFRRRWNLQGPVIGMAARLAAEKGVEVLLAALPRILAVYPTARVLFAGPHEH HCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHH VLGEEAYARRLAPLFAQFRDHWTFLGTLDPREMAAFFPNLDVLVVPSLNSTETFGLVQVE HCCHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHCCCCCEEEECCCCCCCCCCCEEEE AMLCGTPTVASNLPGVRQPPLMTGMGKVVPIGDATALAEAILEIIGNRTAYVRPREEIAA HHHCCCCHHHHCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCEEECCHHHHHH LFSTERTVIEYENLFRQLGVADRV HHHCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRILCALTYYRPYTSGLTIYVERLARGLARRGHQVTVLTSQYDPSLPKLEWLDGVRVIRA CEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHH PVLARISKGVLMPTFGWLATRLALEHDAMSLHLPQFDAPGLALRGRLLKQPVVLTYHSDL HHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHCCCEEEEECCCC KLPPGMLNRVANRVVDVANQAAAALATRIVAYTQDFADHSPYLRRWRTKVTIIPPPVEVA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCEEEEECCCCHHH EIPESEIDAFRRRWNLQGPVIGMAARLAAEKGVEVLLAALPRILAVYPTARVLFAGPHEH HCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHH VLGEEAYARRLAPLFAQFRDHWTFLGTLDPREMAAFFPNLDVLVVPSLNSTETFGLVQVE HCCHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHCCCCCEEEECCCCCCCCCCCEEEE AMLCGTPTVASNLPGVRQPPLMTGMGKVVPIGDATALAEAILEIIGNRTAYVRPREEIAA HHHCCCCHHHHCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCEEECCHHHHHH LFSTERTVIEYENLFRQLGVADRV HHHCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12068013 [H]