Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
---|---|
Accession | NC_012032 |
Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is 222526829
Identifier: 222526829
GI number: 222526829
Start: 4487328
End: 4487864
Strand: Direct
Name: 222526829
Synonym: Chy400_3604
Alternate gene names: NA
Gene position: 4487328-4487864 (Clockwise)
Preceding gene: 222526826
Following gene: 222526830
Centisome position: 85.17
GC content: 59.03
Gene sequence:
>537_bases ATGGCTCCAATTTGGAGTTTGCGAGAGTTTTTGGCACGTAAGCGCGAGGCACTATCCGCATTCCGTTCGCGTCTACGTGA TCAGCCCCCTTCACCGGTGACGTTGCGTGCCGCAGTGACTGTCGCTGCCGGTACCGGCCTGCGTCCGGTGCGGGTGCGCG ATCATACGGTGATCAGTGACTCAGGGCCGGCCCTCGGTGGGTACGATCTGGGGCCAAATGCGCCAGAGTTGCTGTTAGCG GCAATGGCCAGTTGTATCGCTCATTCGGCGCTGGCAATTGCCGCCGACCGTGAACTGGCGATTGACGATCTTCAGGTAGA AGTCAGTGGTCAGATAGACTATCGTGGTGCGCTGTCCGTCAGTGCCGATGCTCCGGTAGCCCCAACCGGCCTGCATTATA CCCTCAAGTATCGAGGCGAAGTCACTGATGCCGAGATGACAGCACTGCAAGCCGATCTGGAACGTCTCTGTCCGGTGTTG CTGGCAGTTTTGCAACCGCAACCGTTATCCGGTCAGGTGCAGCGGCTTGAGGCATAG
Upstream 100 bases:
>100_bases TCTGATTGACAGCACCCCAGATCAAGACGATAATAATTCCAGTTCCCGCCTGGTTTAAGGTAAAAGTGAATGACCCGCCT GGAAGCGTTCGGAGGCAGCT
Downstream 100 bases:
>100_bases CGTATCAGGATAATGCTTTCCTGGCTCTGATGATAGTTGGTTCGTCTGGTGAGCAAAAGGAGAGGTTGTATGTGTCCACC ACGCTTTATCGAGTCGATTC
Product: OsmC family protein
Products: NA
Alternate protein names: OsmC-Like Protein; Redox Protein Regulator Of Disulfide Bond Formation; OsmC-Family Protein
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MAPIWSLREFLARKREALSAFRSRLRDQPPSPVTLRAAVTVAAGTGLRPVRVRDHTVISDSGPALGGYDLGPNAPELLLA AMASCIAHSALAIAADRELAIDDLQVEVSGQIDYRGALSVSADAPVAPTGLHYTLKYRGEVTDAEMTALQADLERLCPVL LAVLQPQPLSGQVQRLEA
Sequences:
>Translated_178_residues MAPIWSLREFLARKREALSAFRSRLRDQPPSPVTLRAAVTVAAGTGLRPVRVRDHTVISDSGPALGGYDLGPNAPELLLA AMASCIAHSALAIAADRELAIDDLQVEVSGQIDYRGALSVSADAPVAPTGLHYTLKYRGEVTDAEMTALQADLERLCPVL LAVLQPQPLSGQVQRLEA >Mature_177_residues APIWSLREFLARKREALSAFRSRLRDQPPSPVTLRAAVTVAAGTGLRPVRVRDHTVISDSGPALGGYDLGPNAPELLLAA MASCIAHSALAIAADRELAIDDLQVEVSGQIDYRGALSVSADAPVAPTGLHYTLKYRGEVTDAEMTALQADLERLCPVLL AVLQPQPLSGQVQRLEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18959; Mature: 18828
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPIWSLREFLARKREALSAFRSRLRDQPPSPVTLRAAVTVAAGTGLRPVRVRDHTVISD CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCEEEECCCEEECC SGPALGGYDLGPNAPELLLAAMASCIAHSALAIAADRELAIDDLQVEVSGQIDYRGALSV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCEEEEEEEEEEECCEEECEEEEE SADAPVAPTGLHYTLKYRGEVTDAEMTALQADLERLCPVLLAVLQPQPLSGQVQRLEA CCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCC >Mature Secondary Structure APIWSLREFLARKREALSAFRSRLRDQPPSPVTLRAAVTVAAGTGLRPVRVRDHTVISD CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCEEEECCCEEECC SGPALGGYDLGPNAPELLLAAMASCIAHSALAIAADRELAIDDLQVEVSGQIDYRGALSV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCEEEEEEEEEEECCEEECEEEEE SADAPVAPTGLHYTLKYRGEVTDAEMTALQADLERLCPVLLAVLQPQPLSGQVQRLEA CCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA