Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is 222526830
Identifier: 222526830
GI number: 222526830
Start: 4487934
End: 4488761
Strand: Direct
Name: 222526830
Synonym: Chy400_3605
Alternate gene names: NA
Gene position: 4487934-4488761 (Clockwise)
Preceding gene: 222526829
Following gene: 222526832
Centisome position: 85.18
GC content: 56.76
Gene sequence:
>828_bases ATGTGTCCACCACGCTTTATCGAGTCGATTCAATCCCCTGAAATCAGTCGGCGCAATTTGCTCAAATTTGGTTTGGGAGC AGCGGTTGCTGCCGTTGCCGCACCGTTAACGGCGGAAGCGGCGACGGCTACGCGGGCCAGTTTCCGAAATGTGGCTGATT TAACTCATTTGTTGGGCACGCAATTTCCGCTTTTCCCCGGTGCGGCACCATTTCAGATTACTCCGGTGGTTTTTCACGAG CGCGATGGCTACTATGGCAGCATTCTGAATTACTGGGAGCATTCCGGTACACACATGGATGCGCCGGTGCATTTTGCTCC CAATGGTTTGTTTGTTGATCAGATTCCGGTCAGTTCGCTGGTGGTGCCGGCAGTGGTGATTAACATTAGCGAGCGGGCAG CCCGCGATCCCGATACGGTCGTTACCCCAGACGATATTCGGGCGTGGGAGCGGCGTTACGGCCGGATACCCAATAATGCC GCCGTGTTGATGGCAAGCGGTTGGGGGGCACGTGCCCATTCGGTTGAACTCTTCCGCAATACCGACTCGAGTGGGGTGAT GCACTTCCCCGGTTTCGGGAAGGATGCGATTGATTTTCTACTCACCGAGCGGAGTATCAGCGGTATCGGGGTTGATACCT TGAGTCTCGATCACGGCCCCTCGACGACCTTTGCCGTGCATTATACGTTGTTACCGACGAACCGCTGGGGTTTGGAGAAT CTGGCGAATCTGGAGTCGATCCCACCAAGCGGCGCAACGCTGGTGGTTGGGGCACCGAAAATCGCTGCCGGCTCCGGTGG ACCGAGCCGGGTGTTCGCGCTGTGGTAA
Upstream 100 bases:
>100_bases ATCCGGTCAGGTGCAGCGGCTTGAGGCATAGCGTATCAGGATAATGCTTTCCTGGCTCTGATGATAGTTGGTTCGTCTGG TGAGCAAAAGGAGAGGTTGT
Downstream 100 bases:
>100_bases TCAGGGGTATATGCGCACATAGCCGGGGTAGCACAGACTGAAGCCTGTGCTACCTCCGTTCTTCTCTACACAATCCCCTG ATCGTAGAAGTGACGAATCT
Product: cyclase family protein
Products: NA
Alternate protein names: Cyclase; Metal-Dependent Hydrolase; Cyclase Family; Cyclase Superfamily; Cyclase-Related Protein; Kynurenine Formamidase; Polyketide Cyclase; Metal-Dependent Hydrolase/Cyclase; Twin-Arginine Translocation Pathway Signal; Arylformamidase; Cyclase Superfamily Protein; Secreted Protein
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MCPPRFIESIQSPEISRRNLLKFGLGAAVAAVAAPLTAEAATATRASFRNVADLTHLLGTQFPLFPGAAPFQITPVVFHE RDGYYGSILNYWEHSGTHMDAPVHFAPNGLFVDQIPVSSLVVPAVVINISERAARDPDTVVTPDDIRAWERRYGRIPNNA AVLMASGWGARAHSVELFRNTDSSGVMHFPGFGKDAIDFLLTERSISGIGVDTLSLDHGPSTTFAVHYTLLPTNRWGLEN LANLESIPPSGATLVVGAPKIAAGSGGPSRVFALW
Sequences:
>Translated_275_residues MCPPRFIESIQSPEISRRNLLKFGLGAAVAAVAAPLTAEAATATRASFRNVADLTHLLGTQFPLFPGAAPFQITPVVFHE RDGYYGSILNYWEHSGTHMDAPVHFAPNGLFVDQIPVSSLVVPAVVINISERAARDPDTVVTPDDIRAWERRYGRIPNNA AVLMASGWGARAHSVELFRNTDSSGVMHFPGFGKDAIDFLLTERSISGIGVDTLSLDHGPSTTFAVHYTLLPTNRWGLEN LANLESIPPSGATLVVGAPKIAAGSGGPSRVFALW >Mature_275_residues MCPPRFIESIQSPEISRRNLLKFGLGAAVAAVAAPLTAEAATATRASFRNVADLTHLLGTQFPLFPGAAPFQITPVVFHE RDGYYGSILNYWEHSGTHMDAPVHFAPNGLFVDQIPVSSLVVPAVVINISERAARDPDTVVTPDDIRAWERRYGRIPNNA AVLMASGWGARAHSVELFRNTDSSGVMHFPGFGKDAIDFLLTERSISGIGVDTLSLDHGPSTTFAVHYTLLPTNRWGLEN LANLESIPPSGATLVVGAPKIAAGSGGPSRVFALW
Specific function: Unknown
COG id: COG1878
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29495; Mature: 29495
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCPPRFIESIQSPEISRRNLLKFGLGAAVAAVAAPLTAEAATATRASFRNVADLTHLLGT CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC QFPLFPGAAPFQITPVVFHERDGYYGSILNYWEHSGTHMDAPVHFAPNGLFVDQIPVSSL CCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCCCCEEECCCCEEEECCCHHHH VVPAVVINISERAARDPDTVVTPDDIRAWERRYGRIPNNAAVLMASGWGARAHSVELFRN HHHHHEEECHHHHCCCCCCEECCHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEEEC TDSSGVMHFPGFGKDAIDFLLTERSISGIGVDTLSLDHGPSTTFAVHYTLLPTNRWGLEN CCCCCEEECCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEEEEECCCCCHHH LANLESIPPSGATLVVGAPKIAAGSGGPSRVFALW HHHHHCCCCCCCEEEEECCEEECCCCCCCEEEEEC >Mature Secondary Structure MCPPRFIESIQSPEISRRNLLKFGLGAAVAAVAAPLTAEAATATRASFRNVADLTHLLGT CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC QFPLFPGAAPFQITPVVFHERDGYYGSILNYWEHSGTHMDAPVHFAPNGLFVDQIPVSSL CCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCCCCEEECCCCEEEECCCHHHH VVPAVVINISERAARDPDTVVTPDDIRAWERRYGRIPNNAAVLMASGWGARAHSVELFRN HHHHHEEECHHHHCCCCCCEECCHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEEEC TDSSGVMHFPGFGKDAIDFLLTERSISGIGVDTLSLDHGPSTTFAVHYTLLPTNRWGLEN CCCCCEEECCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEEEEECCCCCHHH LANLESIPPSGATLVVGAPKIAAGSGGPSRVFALW HHHHHCCCCCCCEEEEECCEEECCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA