Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is 222526813
Identifier: 222526813
GI number: 222526813
Start: 4461948
End: 4462346
Strand: Direct
Name: 222526813
Synonym: Chy400_3587
Alternate gene names: NA
Gene position: 4461948-4462346 (Clockwise)
Preceding gene: 222526812
Following gene: 222526826
Centisome position: 84.68
GC content: 54.14
Gene sequence:
>399_bases ATGAGCAATCCTGCACAGCATATTATTCGATACGCCGCTCGCCAGGTGCCCGCGCTCGACGCCATCTCGGTCATTACCGC CTTTACCGAGACACTTAAGATTATCCAGGCCGAAGAGACAAAGCGTGCGCAGATTGCGGCGCAGCGCGATGTGTTGATCG AGGCGCTTGAGATCGAGCGCGAGGTTATGCTGGCCTACTTTGAGCAGCGCTTCGCCGAGCGCCGGCAAGCCCTTGACCGC TTCTTTCTCCTGCTGGATTACGGTGTCACCCACCACGATACGGCGAGTATCGATGCTGCGCTCACCGGTATTCTTGGCAT TATTCAAGACAATCCGCTACGTGATTTTGAGACGTTCAAAAAGTGTATGGCGCGCCCGGATTTTATAATTGAATTGTGA
Upstream 100 bases:
>100_bases TGATCAAGACCTGTTTGAGATAGCAAGGGTTGCGAAGGGGCTGGCTGAGGCCATTGATGTGAAGACATTACCACAGGCAG CCTGAGACAGAGGAATAACT
Downstream 100 bases:
>100_bases TTGTGTTTCCGGCGAGCGACCGGCAGCGGAGAGATGAATGTATGACGCCAGGGGACATTAGCCATTGCCCCCTGGCGTCG TTCATGCTGCTCGTGAGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MSNPAQHIIRYAARQVPALDAISVITAFTETLKIIQAEETKRAQIAAQRDVLIEALEIEREVMLAYFEQRFAERRQALDR FFLLLDYGVTHHDTASIDAALTGILGIIQDNPLRDFETFKKCMARPDFIIEL
Sequences:
>Translated_132_residues MSNPAQHIIRYAARQVPALDAISVITAFTETLKIIQAEETKRAQIAAQRDVLIEALEIEREVMLAYFEQRFAERRQALDR FFLLLDYGVTHHDTASIDAALTGILGIIQDNPLRDFETFKKCMARPDFIIEL >Mature_131_residues SNPAQHIIRYAARQVPALDAISVITAFTETLKIIQAEETKRAQIAAQRDVLIEALEIEREVMLAYFEQRFAERRQALDRF FLLLDYGVTHHDTASIDAALTGILGIIQDNPLRDFETFKKCMARPDFIIEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15107; Mature: 14975
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNPAQHIIRYAARQVPALDAISVITAFTETLKIIQAEETKRAQIAAQRDVLIEALEIER CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVMLAYFEQRFAERRQALDRFFLLLDYGVTHHDTASIDAALTGILGIIQDNPLRDFETFK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH KCMARPDFIIEL HHHCCCCEEEEC >Mature Secondary Structure SNPAQHIIRYAARQVPALDAISVITAFTETLKIIQAEETKRAQIAAQRDVLIEALEIER CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVMLAYFEQRFAERRQALDRFFLLLDYGVTHHDTASIDAALTGILGIIQDNPLRDFETFK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH KCMARPDFIIEL HHHCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA