Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is 222526750

Identifier: 222526750

GI number: 222526750

Start: 4387241

End: 4388215

Strand: Reverse

Name: 222526750

Synonym: Chy400_3524

Alternate gene names: NA

Gene position: 4388215-4387241 (Counterclockwise)

Preceding gene: 222526757

Following gene: 222526748

Centisome position: 83.28

GC content: 55.9

Gene sequence:

>975_bases
ATGATCCCTCAGTGGCTTACGCACAACCGTCTGTACGATCTGGCGCGCAGTGGTCAACGTCTACCACCCTGGTGGGCAGT
GATACTGGTTGGTTTATTCATCGCTTTTGGTTCGCAGCTTTTTGCCTTGCCGATTGTCTTCATGCTTTTCCTCGCCGGTA
TCATACCGATAACTGAAGAGAGTGCGCTTACCCAACCGCCGCTGCTATCAGGGCTTGGGTTGTCCCTTCAGTTAATGGTG
GCCTTCGGGGCAATGATTCTGTTCACCTGGTTGTGGATACGCTTTTACGAGCGACGTTCTTTCACCACTCTTGGCTTCGA
GCGGGGAAGCATCCTCTTCCTCTACGGTCGCGGCCTGCTCATCGGGTTGGCTGCATTCACAGCAACTGTAGGGCTAATGG
CACTCTTGGGTTACATTGCTATCGAGGATAGTGATCCTGCACAGGTTGGGCTGGCGGCGCTCGGTGGAGTCGTGCTTGTC
TTCTTCCCGGGCTGGCTGATTCAGGGCGCAGCCGAAGAAATTGTCACCCGGGGCTGGATGTTACCGACCCTCTCGGCACG
CTACCGGGTATGGGTCGGATTACTCATCTCATCGCTCTTCTTTGCCTTTATGCACGCTCTCAACCCCAACATGAGTGTGC
TGGCAATGATCAATCTGGCTCTGTACGGTCTGTTTGGCGCACTCTACGCTCTGCGTGAAGAGTCACTGTGGGGTATCTGT
GCCTTCCATTCGATCTGGAACTGGGCGCAGGGAAACCTCTTCGGACTGCAAGTGAGCGGCCAGATGGTTAGCGGTGGCAT
GATCTTCAATCTGGTTGAGACCGGTCCTGACTGGTTCACCGGCGGTGCATTCGGGCCGGAAGGCGGATTGGTGACAACGA
TTGTCCTGCTGTTAAGCATCGCGATTATCTGGTGGTGGCCGGCAACCGGCCAGCGTGTCGCCACCCAACCGGTTACAGCG
GATCGTGCGTTGTAG

Upstream 100 bases:

>100_bases
ACAGATCATCTTTTACCCGACTCGATCCCTCTTGACGACGATGTATGGTTATTGTTAGAATAAATGATAACGATATTATT
ATTGATAATAAGGAGCAGAT

Downstream 100 bases:

>100_bases
TCGGCTAGGGTTGATGATTCCACAGTGTCAACTGCGCTTCATCAACGACACCTGACGCCATTCTCAATAGTTCCTGCAGG
GGATGGGGAAACCTTACGGG

Product: abortive infection protein

Products: NA

Alternate protein names: CAAX Amino Terminal Protease Family Protein; Metal-Dependent Membrane Protease; CAAX Amino Terminal Protease Family; Protease; CAAX Amino Terminal Protease; Caax Amino Protease Family; Ypothetical Protein SMU.; Membrane-Associated CAAX Amino Terminal Protease; CAAX Amino Protease Family Protein; Caax Amino Terminal Protease Family; CAAX Amino Protease; CAAX-Like Membrane Endopeptidase

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MIPQWLTHNRLYDLARSGQRLPPWWAVILVGLFIAFGSQLFALPIVFMLFLAGIIPITEESALTQPPLLSGLGLSLQLMV
AFGAMILFTWLWIRFYERRSFTTLGFERGSILFLYGRGLLIGLAAFTATVGLMALLGYIAIEDSDPAQVGLAALGGVVLV
FFPGWLIQGAAEEIVTRGWMLPTLSARYRVWVGLLISSLFFAFMHALNPNMSVLAMINLALYGLFGALYALREESLWGIC
AFHSIWNWAQGNLFGLQVSGQMVSGGMIFNLVETGPDWFTGGAFGPEGGLVTTIVLLLSIAIIWWWPATGQRVATQPVTA
DRAL

Sequences:

>Translated_324_residues
MIPQWLTHNRLYDLARSGQRLPPWWAVILVGLFIAFGSQLFALPIVFMLFLAGIIPITEESALTQPPLLSGLGLSLQLMV
AFGAMILFTWLWIRFYERRSFTTLGFERGSILFLYGRGLLIGLAAFTATVGLMALLGYIAIEDSDPAQVGLAALGGVVLV
FFPGWLIQGAAEEIVTRGWMLPTLSARYRVWVGLLISSLFFAFMHALNPNMSVLAMINLALYGLFGALYALREESLWGIC
AFHSIWNWAQGNLFGLQVSGQMVSGGMIFNLVETGPDWFTGGAFGPEGGLVTTIVLLLSIAIIWWWPATGQRVATQPVTA
DRAL
>Mature_324_residues
MIPQWLTHNRLYDLARSGQRLPPWWAVILVGLFIAFGSQLFALPIVFMLFLAGIIPITEESALTQPPLLSGLGLSLQLMV
AFGAMILFTWLWIRFYERRSFTTLGFERGSILFLYGRGLLIGLAAFTATVGLMALLGYIAIEDSDPAQVGLAALGGVVLV
FFPGWLIQGAAEEIVTRGWMLPTLSARYRVWVGLLISSLFFAFMHALNPNMSVLAMINLALYGLFGALYALREESLWGIC
AFHSIWNWAQGNLFGLQVSGQMVSGGMIFNLVETGPDWFTGGAFGPEGGLVTTIVLLLSIAIIWWWPATGQRVATQPVTA
DRAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35567; Mature: 35567

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPQWLTHNRLYDLARSGQRLPPWWAVILVGLFIAFGSQLFALPIVFMLFLAGIIPITEE
CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SALTQPPLLSGLGLSLQLMVAFGAMILFTWLWIRFYERRSFTTLGFERGSILFLYGRGLL
CCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEECCHHH
IGLAAFTATVGLMALLGYIAIEDSDPAQVGLAALGGVVLVFFPGWLIQGAAEEIVTRGWM
HHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LPTLSARYRVWVGLLISSLFFAFMHALNPNMSVLAMINLALYGLFGALYALREESLWGIC
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
AFHSIWNWAQGNLFGLQVSGQMVSGGMIFNLVETGPDWFTGGAFGPEGGLVTTIVLLLSI
HHHHHHHCCCCCEEEEEEECEEECCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH
AIIWWWPATGQRVATQPVTADRAL
HHHHCCCCCCCEEECCCCCCCCCC
>Mature Secondary Structure
MIPQWLTHNRLYDLARSGQRLPPWWAVILVGLFIAFGSQLFALPIVFMLFLAGIIPITEE
CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SALTQPPLLSGLGLSLQLMVAFGAMILFTWLWIRFYERRSFTTLGFERGSILFLYGRGLL
CCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEECCHHH
IGLAAFTATVGLMALLGYIAIEDSDPAQVGLAALGGVVLVFFPGWLIQGAAEEIVTRGWM
HHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LPTLSARYRVWVGLLISSLFFAFMHALNPNMSVLAMINLALYGLFGALYALREESLWGIC
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
AFHSIWNWAQGNLFGLQVSGQMVSGGMIFNLVETGPDWFTGGAFGPEGGLVTTIVLLLSI
HHHHHHHCCCCCEEEEEEECEEECCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH
AIIWWWPATGQRVATQPVTADRAL
HHHHCCCCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA