| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is malF [H]
Identifier: 222526637
GI number: 222526637
Start: 4242396
End: 4243616
Strand: Direct
Name: malF [H]
Synonym: Chy400_3405
Alternate gene names: 222526637
Gene position: 4242396-4243616 (Clockwise)
Preceding gene: 222526636
Following gene: 222526638
Centisome position: 80.52
GC content: 55.2
Gene sequence:
>1221_bases ATGGTCTCGTGGTCTAATCGCCGCAAAGCGCTCACCGTTCTGCTCTTCACCGGTCCCACTATCATTGGTATTTTGCTGTT CAATATTTATCCTATTCTGCTCAGTGTATATACCTCGTTTACCAATCGTAATCGTTTTCGCCCCAACCCCGATTGTGACG TGTTTCTGACCGGTATCCTCGATCCGCTGTGCTGGCCGCAATTCCGTACCAGCGCACCGGTTGGTCTGGGACAGCCGTAC CGGTTACAAGACCCTCTCTTTGCGAATTACGCGAATCTGATCGGTAATCTCTTTACCCCAGAGGCGTTGTCGGCAATGGC TGCCATTGCCCTCTGCTTTGTGCCCCTGGTCGCGGCTGCGTTCGTGAACCGACGCTTGCAGCGCATGATGGAACCGCCGG TCGCGCCGTCGATTGTCTGGTTGGGAGCGTTGGTGCTGGGTTTTATCCTGGCGGCGGTTATCAATGTCGCCAATGCGTAT GAGACGCTGATGCGCAGCGGCGATTTTGTGGTTGTGGTCTTCCGCACGTTGCTCTTTGTGGTTGCACGGGTGCCGTTCAG TTTTCTGCTTGGTCTGACCTTTGCCCTGCTGCTGAACAGTGACTATCTCCCCGGTCGCACGTTGTTTCGGGTGTTGCTCT TCGTGCCATGGGCTGCATCCTCACTGGCGATTCTGATGGCCCTGATCTGGCAGTTCTTCTTCCGCGAACAGGGAACCCTC AATCAGGTGTTGGCGATCTTTGGGATTGACGGCCCGTCCTGGCTCCGTGATCCGGTCAGTGCGTTTGCAATTGTGGTGCT GGTTGACACCTGGTTTTCGTATCCCTTCTTTATGATCGTGATTCTGGGTGCGCTGCAGGCGGTTCCTCGCGATGTGTACG AAGCGGCTGAGCTGGATGGCGCTTCCTGGTGGCAGCAGCTTACCCGTATTACCTTGCCGCTGATCCGTCCGGCAGTACTT CCGGCAACGGTCTTGACCTCGATCACCGCATTTCAGATGTTCGGTACGGTGTGGGCAATCACTCAGGGTGGGCCGGTGAA TGAGGTCGGTCGGCCCGGTGCAACTGAGTTTGTGATTGTGTACGCCTACAAGCAGATTTTTCAAACTCAGAATTACGGTA ACGCGACCGCTTTTGCCGTCATTCTCTTCATTTTCCTGTTTACGGCTACCCTCTATAGCCTCCGGTTGACGCGCATCACG AAAGGGGCCTACGAGTCATGA
Upstream 100 bases:
>100_bases CCGGACCACGCTGTCCGGCTCACTCACTACACCCGCTGCGCCGGTTGGGCGCCCGGTAGCCGATGACTGGCCTGCCGGTT GCTTCCAGTGAGGTACGCAC
Downstream 100 bases:
>100_bases TTCGCAAGCCTTCTCGACCGGTGTTGGTGTTGCAGTACACCATCCTTATTCTCGGCGTGCTGTTTGCTGTCTATCCGCTC TGGTTTGCTTTTCTCGCCTC
Product: binding-protein-dependent transport systems inner membrane component
Products: ADP; phosphate; maltose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MVSWSNRRKALTVLLFTGPTIIGILLFNIYPILLSVYTSFTNRNRFRPNPDCDVFLTGILDPLCWPQFRTSAPVGLGQPY RLQDPLFANYANLIGNLFTPEALSAMAAIALCFVPLVAAAFVNRRLQRMMEPPVAPSIVWLGALVLGFILAAVINVANAY ETLMRSGDFVVVVFRTLLFVVARVPFSFLLGLTFALLLNSDYLPGRTLFRVLLFVPWAASSLAILMALIWQFFFREQGTL NQVLAIFGIDGPSWLRDPVSAFAIVVLVDTWFSYPFFMIVILGALQAVPRDVYEAAELDGASWWQQLTRITLPLIRPAVL PATVLTSITAFQMFGTVWAITQGGPVNEVGRPGATEFVIVYAYKQIFQTQNYGNATAFAVILFIFLFTATLYSLRLTRIT KGAYES
Sequences:
>Translated_406_residues MVSWSNRRKALTVLLFTGPTIIGILLFNIYPILLSVYTSFTNRNRFRPNPDCDVFLTGILDPLCWPQFRTSAPVGLGQPY RLQDPLFANYANLIGNLFTPEALSAMAAIALCFVPLVAAAFVNRRLQRMMEPPVAPSIVWLGALVLGFILAAVINVANAY ETLMRSGDFVVVVFRTLLFVVARVPFSFLLGLTFALLLNSDYLPGRTLFRVLLFVPWAASSLAILMALIWQFFFREQGTL NQVLAIFGIDGPSWLRDPVSAFAIVVLVDTWFSYPFFMIVILGALQAVPRDVYEAAELDGASWWQQLTRITLPLIRPAVL PATVLTSITAFQMFGTVWAITQGGPVNEVGRPGATEFVIVYAYKQIFQTQNYGNATAFAVILFIFLFTATLYSLRLTRIT KGAYES >Mature_406_residues MVSWSNRRKALTVLLFTGPTIIGILLFNIYPILLSVYTSFTNRNRFRPNPDCDVFLTGILDPLCWPQFRTSAPVGLGQPY RLQDPLFANYANLIGNLFTPEALSAMAAIALCFVPLVAAAFVNRRLQRMMEPPVAPSIVWLGALVLGFILAAVINVANAY ETLMRSGDFVVVVFRTLLFVVARVPFSFLLGLTFALLLNSDYLPGRTLFRVLLFVPWAASSLAILMALIWQFFFREQGTL NQVLAIFGIDGPSWLRDPVSAFAIVVLVDTWFSYPFFMIVILGALQAVPRDVYEAAELDGASWWQQLTRITLPLIRPAVL PATVLTSITAFQMFGTVWAITQGGPVNEVGRPGATEFVIVYAYKQIFQTQNYGNATAFAVILFIFLFTATLYSLRLTRIT KGAYES
Specific function: Part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1175
COG function: function code G; ABC-type sugar transport systems, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790465, Length=239, Percent_Identity=31.7991631799163, Blast_Score=121, Evalue=7e-29, Organism=Escherichia coli, GI1787570, Length=255, Percent_Identity=29.8039215686275, Blast_Score=97, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 45203; Mature: 45203
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSWSNRRKALTVLLFTGPTIIGILLFNIYPILLSVYTSFTNRNRFRPNPDCDVFLTGIL CCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH DPLCWPQFRTSAPVGLGQPYRLQDPLFANYANLIGNLFTPEALSAMAAIALCFVPLVAAA HHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH FVNRRLQRMMEPPVAPSIVWLGALVLGFILAAVINVANAYETLMRSGDFVVVVFRTLLFV HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH VARVPFSFLLGLTFALLLNSDYLPGRTLFRVLLFVPWAASSLAILMALIWQFFFREQGTL HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCH NQVLAIFGIDGPSWLRDPVSAFAIVVLVDTWFSYPFFMIVILGALQAVPRDVYEAAELDG HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH ASWWQQLTRITLPLIRPAVLPATVLTSITAFQMFGTVWAITQGGPVNEVGRPGATEFVIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHH YAYKQIFQTQNYGNATAFAVILFIFLFTATLYSLRLTRITKGAYES HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MVSWSNRRKALTVLLFTGPTIIGILLFNIYPILLSVYTSFTNRNRFRPNPDCDVFLTGIL CCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH DPLCWPQFRTSAPVGLGQPYRLQDPLFANYANLIGNLFTPEALSAMAAIALCFVPLVAAA HHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH FVNRRLQRMMEPPVAPSIVWLGALVLGFILAAVINVANAYETLMRSGDFVVVVFRTLLFV HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH VARVPFSFLLGLTFALLLNSDYLPGRTLFRVLLFVPWAASSLAILMALIWQFFFREQGTL HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCH NQVLAIFGIDGPSWLRDPVSAFAIVVLVDTWFSYPFFMIVILGALQAVPRDVYEAAELDG HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH ASWWQQLTRITLPLIRPAVLPATVLTSITAFQMFGTVWAITQGGPVNEVGRPGATEFVIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHH YAYKQIFQTQNYGNATAFAVILFIFLFTATLYSLRLTRITKGAYES HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; maltose [Periplasm]; H2O [C]
Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA