| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is malE [H]
Identifier: 222526636
GI number: 222526636
Start: 4240914
End: 4242227
Strand: Direct
Name: malE [H]
Synonym: Chy400_3404
Alternate gene names: 222526636
Gene position: 4240914-4242227 (Clockwise)
Preceding gene: 222526634
Following gene: 222526637
Centisome position: 80.49
GC content: 59.82
Gene sequence:
>1314_bases GTGAGTGCAATGAAGCGTGCTTTGATTGCTCTGTTCCTCGCCGCCGCAATGATTTTGGCGGCATGTGGTTCGAATCAGAC GGCCACTCAGCCGACCACCGCTCCTGCCGAGCAGCCGACCACCGCTCCTGCCGAGCAGCCGACCACCGCTCCTGCCGAGC AGCCCACCACCGCACCCTCTGCTCAACAGGTTACCATTCGTATCTGGCATCAGTGGGATGGTGCGTATCTGACTGCGATT GAGCAGGCTTTCCGTGATTACGAAGCCGCCAATCCGAATGTCAAGATCGATCTCTCGAAGCCGGAAGATGTCAGCAATGC GTTGAATGTGGCGATTCCCGCCGGTGAAGGCCCCGATATTATCGGTTGGGCGAATGACCAGATCGGTCAGCAGGCACTGG TTGGCAACATCGTCGCGCTGAACGATTACGGCATCACCGAGGATTTCCTGCGCAGCACCTATGAGCCGGCTGCAGTCAAT GGTGTGATCTGGCAGGGCAAGATTTGGGCATTGCCGGAGACCCAGGAAGGTATTGCTCTAATCTACAACAAGGCAGTCGT GGGCGATATGCAGTTGCCGACCAGCCTCGATGAGCTGTTGCAGATGGCGAAGGATTTCCGCGCTGCCAACCCTGACAAGA CCTTCGTCTGCAACCAGGGCTTCGGTGGTAACGATGCGTACCACGTCGCTCCGATCTACTTCGGCTACGGTGTTCCGAGC TATGTTGACGATGAGGGCAATGTCTACGTTAACACGCCGGAGATGATCAAGGGTGGCGAGTGGCTGGCCGAGATGAGCAA GGTCTCGTTCAGCGAGCAGAGCTACGACATCTGCAAGGCTGCTCTGGCTGAAGGCAAGGCGGCTATGTGGTGGACCGGCC CGTGGGCGATTGCCGGTATCGAGCAGGATGGTGTTGATTACGGCATTCTGCCGATGGGCAAGCCCTTCGTCGGTATCAAG ACCCTGATGCTGACCCGCAATGCGGTTGAGCGCGGCAATGCTGAGGTGGCGCTCGATATTATGAAGTACTTCACCAGCGC CGAGGTGCAGGCGAAGCTGGCCTTGACCAACAAGACGGTGCCCGCAGCGACCGCAGCGCTCCAGAACCCCGAGGTCGCCG CGCTGCCCACGCTGGCCGGCTTTGGTGCCGCCCTTAATACGGGTGTGCCGATGGCCAACACCCCCTTCGCTTCGGCCCAG TGGGGTCCGGTCGGTGAGGCAAGCGTTGCCATCTGGACCGGTGCGCAGACGCCGGCTGAGGCGCTGGCCGCTGCCCAGCA GGCGATTGAAGCTGCGATTATGCAGATGAAGTAA
Upstream 100 bases:
>100_bases CGGGTCTAATGCCTTTTCGATGAATTTGTCTATCTGTTCGTCATTCCAGATTTCCGTTGTTGTGCTGTTGTCGTAGAAGA CACAGTCAAGGAGTACAACC
Downstream 100 bases:
>100_bases ACCTTCCGTGTAGGGGTGAGCAAGGTTCGCTCACCCCTTTTGAACGCCGTCGTTATCAACAACACGAGCCGGACCACGCT GTCCGGCTCACTCACTACAC
Product: family 1 extracellular solute-binding protein
Products: ADP; phosphate; maltose [Cytoplasm] [C]
Alternate protein names: MMBP; Maltodextrin-binding protein [H]
Number of amino acids: Translated: 437; Mature: 436
Protein sequence:
>437_residues MSAMKRALIALFLAAAMILAACGSNQTATQPTTAPAEQPTTAPAEQPTTAPAEQPTTAPSAQQVTIRIWHQWDGAYLTAI EQAFRDYEAANPNVKIDLSKPEDVSNALNVAIPAGEGPDIIGWANDQIGQQALVGNIVALNDYGITEDFLRSTYEPAAVN GVIWQGKIWALPETQEGIALIYNKAVVGDMQLPTSLDELLQMAKDFRAANPDKTFVCNQGFGGNDAYHVAPIYFGYGVPS YVDDEGNVYVNTPEMIKGGEWLAEMSKVSFSEQSYDICKAALAEGKAAMWWTGPWAIAGIEQDGVDYGILPMGKPFVGIK TLMLTRNAVERGNAEVALDIMKYFTSAEVQAKLALTNKTVPAATAALQNPEVAALPTLAGFGAALNTGVPMANTPFASAQ WGPVGEASVAIWTGAQTPAEALAAAQQAIEAAIMQMK
Sequences:
>Translated_437_residues MSAMKRALIALFLAAAMILAACGSNQTATQPTTAPAEQPTTAPAEQPTTAPAEQPTTAPSAQQVTIRIWHQWDGAYLTAI EQAFRDYEAANPNVKIDLSKPEDVSNALNVAIPAGEGPDIIGWANDQIGQQALVGNIVALNDYGITEDFLRSTYEPAAVN GVIWQGKIWALPETQEGIALIYNKAVVGDMQLPTSLDELLQMAKDFRAANPDKTFVCNQGFGGNDAYHVAPIYFGYGVPS YVDDEGNVYVNTPEMIKGGEWLAEMSKVSFSEQSYDICKAALAEGKAAMWWTGPWAIAGIEQDGVDYGILPMGKPFVGIK TLMLTRNAVERGNAEVALDIMKYFTSAEVQAKLALTNKTVPAATAALQNPEVAALPTLAGFGAALNTGVPMANTPFASAQ WGPVGEASVAIWTGAQTPAEALAAAQQAIEAAIMQMK >Mature_436_residues SAMKRALIALFLAAAMILAACGSNQTATQPTTAPAEQPTTAPAEQPTTAPAEQPTTAPSAQQVTIRIWHQWDGAYLTAIE QAFRDYEAANPNVKIDLSKPEDVSNALNVAIPAGEGPDIIGWANDQIGQQALVGNIVALNDYGITEDFLRSTYEPAAVNG VIWQGKIWALPETQEGIALIYNKAVVGDMQLPTSLDELLQMAKDFRAANPDKTFVCNQGFGGNDAYHVAPIYFGYGVPSY VDDEGNVYVNTPEMIKGGEWLAEMSKVSFSEQSYDICKAALAEGKAAMWWTGPWAIAGIEQDGVDYGILPMGKPFVGIKT LMLTRNAVERGNAEVALDIMKYFTSAEVQAKLALTNKTVPAATAALQNPEVAALPTLAGFGAALNTGVPMANTPFASAQW GPVGEASVAIWTGAQTPAEALAAAQQAIEAAIMQMK
Specific function: Involved in an abc transport system for maltotriose [H]
COG id: COG2182
COG function: function code G; Maltose-binding periplasmic proteins/domains
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
Organism=Escherichia coli, GI1790466, Length=387, Percent_Identity=27.6485788113695, Blast_Score=93, Evalue=3e-20,
Paralogues:
None
Copy number: 660 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 720 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase,
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006060 - InterPro: IPR006059 - InterPro: IPR006061 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 46358; Mature: 46227
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAMKRALIALFLAAAMILAACGSNQTATQPTTAPAEQPTTAPAEQPTTAPAEQPTTAPS CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AQQVTIRIWHQWDGAYLTAIEQAFRDYEAANPNVKIDLSKPEDVSNALNVAIPAGEGPDI CCEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEEECCCCCCE IGWANDQIGQQALVGNIVALNDYGITEDFLRSTYEPAAVNGVIWQGKIWALPETQEGIAL EEECCCHHCHHHHHCCEEEEECCCCCHHHHHCCCCCCCCCCEEECCEEEECCCCCCCEEE IYNKAVVGDMQLPTSLDELLQMAKDFRAANPDKTFVCNQGFGGNDAYHVAPIYFGYGVPS EEECEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEEEEECCCCCC YVDDEGNVYVNTPEMIKGGEWLAEMSKVSFSEQSYDICKAALAEGKAAMWWTGPWAIAGI EECCCCCEEECCHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCEEEEEC EQDGVDYGILPMGKPFVGIKTLMLTRNAVERGNAEVALDIMKYFTSAEVQAKLALTNKTV CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEEECCCCC PAATAALQNPEVAALPTLAGFGAALNTGVPMANTPFASAQWGPVGEASVAIWTGAQTPAE CHHHHHHCCCCCEECCCHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHH ALAAAQQAIEAAIMQMK HHHHHHHHHHHHHHHCC >Mature Secondary Structure SAMKRALIALFLAAAMILAACGSNQTATQPTTAPAEQPTTAPAEQPTTAPAEQPTTAPS CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AQQVTIRIWHQWDGAYLTAIEQAFRDYEAANPNVKIDLSKPEDVSNALNVAIPAGEGPDI CCEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEEECCCCCCE IGWANDQIGQQALVGNIVALNDYGITEDFLRSTYEPAAVNGVIWQGKIWALPETQEGIAL EEECCCHHCHHHHHCCEEEEECCCCCHHHHHCCCCCCCCCCEEECCEEEECCCCCCCEEE IYNKAVVGDMQLPTSLDELLQMAKDFRAANPDKTFVCNQGFGGNDAYHVAPIYFGYGVPS EEECEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEEEEECCCCCC YVDDEGNVYVNTPEMIKGGEWLAEMSKVSFSEQSYDICKAALAEGKAAMWWTGPWAIAGI EECCCCCEEECCHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCEEEEEC EQDGVDYGILPMGKPFVGIKTLMLTRNAVERGNAEVALDIMKYFTSAEVQAKLALTNKTV CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEEECCCCC PAATAALQNPEVAALPTLAGFGAALNTGVPMANTPFASAQWGPVGEASVAIWTGAQTPAE CHHHHHHCCCCCEECCCHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHH ALAAAQQAIEAAIMQMK HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; maltose [Periplasm]; H2O [C]
Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12622808 [H]