| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is namA [H]
Identifier: 222526530
GI number: 222526530
Start: 4109653
End: 4110558
Strand: Direct
Name: namA [H]
Synonym: Chy400_3297
Alternate gene names: 222526530
Gene position: 4109653-4110558 (Clockwise)
Preceding gene: 222526517
Following gene: 222526535
Centisome position: 78.0
GC content: 56.4
Gene sequence:
>906_bases ATGGCCGATCTCTTCACACCGCTACAGGTTGCCGGTCGGCAGTTGCGCAATCGGATTGTGATGGCGCCGGCACCGAGTGG GCTGGCCGGTTCTGATGGCTTTTGCCATAGCGCTCTGATCAGTTATTACGAGCGACGAGCAAAGGCCGGGGTAGGTCTGA TTGTTACTGAACCGATGCTTATTTGTGCGCCATCAACACCGACGAGTCATCTCGGTATCTGGCACGATTGTTTTGTTCCT GCACTCCGGCGGCTTTCAGCCGCAGCCCATGCGTTTGGGAGCCGGATTGTCTTTTTGCTGGAAGTTCCGCTTGCTGATAT AGCAATGCCCATGCTCGTTGAGAGCTACGTACAGGGTGCCTGGCGTGCATTAGCCGCCAGTGCAGATGGCGTATTCATCT CGGTTGCCGATGGTGGATTGTTAGCGACGATCATTGCGGCAAATCGGCAGTCGGGTAACGGCAGGCAAATACCGATCACT GAACGTATTCTGCCGTTACTGACTATCATTGAACAGATTCGCCGAAACTATGGTCGTCACATATGGGTTGGGTTGCGTAT GCCGGCAGCGGAACTGGTGGCGGATGGCCTGACCCACCAGGATGCCCGGCTGATTGCCCGACGGGCCGTGGCTGCCGGTG CGCAATTTCTGGATGTGACGATTAATCGTTATTCGCCTGATGTAGCACGCTTTCCGGGCTGGACGCTCCCCCTGGTTGCG AGTATCCATCGTATCGCCAGTGAAGCAGTTGTGATTGGCTCCGGGCAATTGAGTGATCCGTGGCTGGCCGATGCGGCCAT TCAGGACGGAAGTGTTGATTTGGTCATGCTGTGTACCGCTCTGCGGCTCTTGCCTGAATGGCCGCAACTGGCACGCCGGG TGCTGGGAATGGTCAGCGTAAAATGA
Upstream 100 bases:
>100_bases GCGAACGATTACGATGGTAGTGCACCGGTCATTCGGGGCTGGTGGCAAACGCATGGCGTCATCTTCAGGCACCCATACAT GTAAGCAGTGAGCGTCATAT
Downstream 100 bases:
>100_bases CCAGCATGACTCCTGCCGCCACTGCCGATCCGATCACGCCGGCAACGTTTGGACACATTGCCTGCCAGATTAAGAAGTTG TGCCGATCCTCTGCCTGCGC
Product: NADH:flavin oxidoreductase/NADH oxidase
Products: NA
Alternate protein names: Xenobiotic reductase [H]
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MADLFTPLQVAGRQLRNRIVMAPAPSGLAGSDGFCHSALISYYERRAKAGVGLIVTEPMLICAPSTPTSHLGIWHDCFVP ALRRLSAAAHAFGSRIVFLLEVPLADIAMPMLVESYVQGAWRALAASADGVFISVADGGLLATIIAANRQSGNGRQIPIT ERILPLLTIIEQIRRNYGRHIWVGLRMPAAELVADGLTHQDARLIARRAVAAGAQFLDVTINRYSPDVARFPGWTLPLVA SIHRIASEAVVIGSGQLSDPWLADAAIQDGSVDLVMLCTALRLLPEWPQLARRVLGMVSVK
Sequences:
>Translated_301_residues MADLFTPLQVAGRQLRNRIVMAPAPSGLAGSDGFCHSALISYYERRAKAGVGLIVTEPMLICAPSTPTSHLGIWHDCFVP ALRRLSAAAHAFGSRIVFLLEVPLADIAMPMLVESYVQGAWRALAASADGVFISVADGGLLATIIAANRQSGNGRQIPIT ERILPLLTIIEQIRRNYGRHIWVGLRMPAAELVADGLTHQDARLIARRAVAAGAQFLDVTINRYSPDVARFPGWTLPLVA SIHRIASEAVVIGSGQLSDPWLADAAIQDGSVDLVMLCTALRLLPEWPQLARRVLGMVSVK >Mature_300_residues ADLFTPLQVAGRQLRNRIVMAPAPSGLAGSDGFCHSALISYYERRAKAGVGLIVTEPMLICAPSTPTSHLGIWHDCFVPA LRRLSAAAHAFGSRIVFLLEVPLADIAMPMLVESYVQGAWRALAASADGVFISVADGGLLATIIAANRQSGNGRQIPITE RILPLLTIIEQIRRNYGRHIWVGLRMPAAELVADGLTHQDARLIARRAVAAGAQFLDVTINRYSPDVARFPGWTLPLVAS IHRIASEAVVIGSGQLSDPWLADAAIQDGSVDLVMLCTALRLLPEWPQLARRVLGMVSVK
Specific function: Catalyzes the reduction of the double bond of an array of alpha, beta-unsaturated aldehydes and ketones. It also reduces the nitro group of nitroester and nitroaromatic compounds. It could have a role in detoxification processes [H]
COG id: COG1902
COG function: function code C; NADH:flavin oxidoreductases, Old Yellow Enzyme family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NADH:flavin oxidoreductase/NADH oxidase family. NamA subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001155 [H]
Pfam domain/function: PF00724 Oxidored_FMN [H]
EC number: =1.6.99.1 [H]
Molecular weight: Translated: 32404; Mature: 32273
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADLFTPLQVAGRQLRNRIVMAPAPSGLAGSDGFCHSALISYYERRAKAGVGLIVTEPML CCCCCCHHHHHHHHHHCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCEE ICAPSTPTSHLGIWHDCFVPALRRLSAAAHAFGSRIVFLLEVPLADIAMPMLVESYVQGA EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCHHHHHHHHHHHHHHHHH WRALAASADGVFISVADGGLLATIIAANRQSGNGRQIPITERILPLLTIIEQIRRNYGRH HHHHHCCCCCEEEEEECCCEEEEHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCE IWVGLRMPAAELVADGLTHQDARLIARRAVAAGAQFLDVTINRYSPDVARFPGWTLPLVA EEEEECCCHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHCCCCCHHHHH SIHRIASEAVVIGSGQLSDPWLADAAIQDGSVDLVMLCTALRLLPEWPQLARRVLGMVSV HHHHHHHCEEEEECCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCC K C >Mature Secondary Structure ADLFTPLQVAGRQLRNRIVMAPAPSGLAGSDGFCHSALISYYERRAKAGVGLIVTEPML CCCCCHHHHHHHHHHCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCEE ICAPSTPTSHLGIWHDCFVPALRRLSAAAHAFGSRIVFLLEVPLADIAMPMLVESYVQGA EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCHHHHHHHHHHHHHHHHH WRALAASADGVFISVADGGLLATIIAANRQSGNGRQIPITERILPLLTIIEQIRRNYGRH HHHHHCCCCCEEEEEECCCEEEEHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCE IWVGLRMPAAELVADGLTHQDARLIARRAVAAGAQFLDVTINRYSPDVARFPGWTLPLVA EEEEECCCHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHCCCCCHHHHH SIHRIASEAVVIGSGQLSDPWLADAAIQDGSVDLVMLCTALRLLPEWPQLARRVLGMVSV HHHHHHHCEEEEECCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA