| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526535
Identifier: 222526535
GI number: 222526535
Start: 4114326
End: 4115543
Strand: Direct
Name: 222526535
Synonym: Chy400_3302
Alternate gene names: NA
Gene position: 4114326-4115543 (Clockwise)
Preceding gene: 222526530
Following gene: 222526536
Centisome position: 78.09
GC content: 61.49
Gene sequence:
>1218_bases ATGACAACCATTCCATTTCGTCAAGCAGGGTTTGTGGTAACGGTGCTGGCAGTGTCAGTGCTGCTGGCGAAAGGGACGTG GTTTTCCGCTTCAGCCGTCATTCCGGCATTGACTGCCGAATGGGCCTTGAACGACACAGTTCGGGCATGGCTCACGATGT CGGTGCAGTTGGGTTTTGCCTGTGGCGCGTTTATCTCGGCAGTGCTGGGATTGGCGGATCGCTGGCCGACCCACTGGTTT TTTGCCGGTTCAGCCTTGCTGGCGGCGTTGTGTACGGCGTTGATTGCGTGGTGGGCCAATGGCCCTCTACTGGCGTTACC ACTGCGTTTTTTGACGGGCATGGCACTGGCTGGAGTGTATCCGGTTGGGATGAAAATCATGGCGACATGGACGCAACGGG GGCGTGGGCTGGCAATCGGGGTGTTGGTCGGAGCACTGACTGTCGGTTCGGCCTCGCCGCATCTGCTGAATGTTATGGGT GGGATTGATGACTGGCGGCGGACGTTGTTGATGGCTGCCGGTCTGGCAGTTGTGGGTGGGCTGATCGTTGCGCTTATGGT ACGCGAAGGGCCACTACGCACAGCGGCACCGCGTTTCAGTTGGTCGCAGGTGGTGGACGTGGCACGTGAACGACCGGTGT TGCTGGCGAATCTGGGGTATCTGGGCCATATGTGGGAGCTGTACGCGGCGTGGGCATGGTTGCCGCTTTTCCTGCTGGCC AGCTTCGAGGAGCGCGGTATCGCGGCGTCGTGGGCGGGCCTGGTGGCTTTTGCCGCGATTGCAATGGGTGGGCTGGGGAG TGTGCTGGCCGGGCTGCTTGCCGACCGGATCGGGCGAACGACCATCACGATAGCAGCAATGGCGGTGAGTGGCAGTTGCG CACTCGCGATAGGCTTTACCTTTGGCGGAGAACCATGGGTGGTTGCTGTACTGGCGATGGTATGGGGATTAACGATTGTT GCCGACTCGGCCCAATTCTCGGCAGCGGTAAGCGAACTCTCACCGCCGGGCCGTACCGGTACGGCGCTGACGTTGCAGAC CAGTCTGGGGTTTCTGCTCACCCTGATCACCATCTGGCTCATCCCACCACTGGTCAATCTGGTTGGCTGGCGGTGGGCCT TTGCCGGGCTGGCAGTTGGCCCGGCAATCGGGATTTGGGCGATGGCGACGCTGCGGCGTTCGCCGGCAGCGGCACGGCTG GCGGGTGGACGTGGATAA
Upstream 100 bases:
>100_bases ATGTACAGAAGTCAGTATAGCACTCGCAATTGTTGCGAGCGGTAAGATCGGGTCATTCTTTGCTAACTGTGCATTGTCGT TGTATTCACGGAGTGAACAG
Downstream 100 bases:
>100_bases GAGCGGAAAGGGCATGCAGCCGATTGGATTCTGTCATACAATGACATAATGCAATAATAACTCTTAGCCAATCGGGTGGA GTGGCGCATGTCCGTTGACC
Product: major facilitator superfamily protein
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Transporter Facilitator Family; Facilitator Superfamily Transporter; MFS Transporter; Facilitator Family Transporter; Facilitator Superfamily Permease; MFS Superfamily Transporter
Number of amino acids: Translated: 405; Mature: 404
Protein sequence:
>405_residues MTTIPFRQAGFVVTVLAVSVLLAKGTWFSASAVIPALTAEWALNDTVRAWLTMSVQLGFACGAFISAVLGLADRWPTHWF FAGSALLAALCTALIAWWANGPLLALPLRFLTGMALAGVYPVGMKIMATWTQRGRGLAIGVLVGALTVGSASPHLLNVMG GIDDWRRTLLMAAGLAVVGGLIVALMVREGPLRTAAPRFSWSQVVDVARERPVLLANLGYLGHMWELYAAWAWLPLFLLA SFEERGIAASWAGLVAFAAIAMGGLGSVLAGLLADRIGRTTITIAAMAVSGSCALAIGFTFGGEPWVVAVLAMVWGLTIV ADSAQFSAAVSELSPPGRTGTALTLQTSLGFLLTLITIWLIPPLVNLVGWRWAFAGLAVGPAIGIWAMATLRRSPAAARL AGGRG
Sequences:
>Translated_405_residues MTTIPFRQAGFVVTVLAVSVLLAKGTWFSASAVIPALTAEWALNDTVRAWLTMSVQLGFACGAFISAVLGLADRWPTHWF FAGSALLAALCTALIAWWANGPLLALPLRFLTGMALAGVYPVGMKIMATWTQRGRGLAIGVLVGALTVGSASPHLLNVMG GIDDWRRTLLMAAGLAVVGGLIVALMVREGPLRTAAPRFSWSQVVDVARERPVLLANLGYLGHMWELYAAWAWLPLFLLA SFEERGIAASWAGLVAFAAIAMGGLGSVLAGLLADRIGRTTITIAAMAVSGSCALAIGFTFGGEPWVVAVLAMVWGLTIV ADSAQFSAAVSELSPPGRTGTALTLQTSLGFLLTLITIWLIPPLVNLVGWRWAFAGLAVGPAIGIWAMATLRRSPAAARL AGGRG >Mature_404_residues TTIPFRQAGFVVTVLAVSVLLAKGTWFSASAVIPALTAEWALNDTVRAWLTMSVQLGFACGAFISAVLGLADRWPTHWFF AGSALLAALCTALIAWWANGPLLALPLRFLTGMALAGVYPVGMKIMATWTQRGRGLAIGVLVGALTVGSASPHLLNVMGG IDDWRRTLLMAAGLAVVGGLIVALMVREGPLRTAAPRFSWSQVVDVARERPVLLANLGYLGHMWELYAAWAWLPLFLLAS FEERGIAASWAGLVAFAAIAMGGLGSVLAGLLADRIGRTTITIAAMAVSGSCALAIGFTFGGEPWVVAVLAMVWGLTIVA DSAQFSAAVSELSPPGRTGTALTLQTSLGFLLTLITIWLIPPLVNLVGWRWAFAGLAVGPAIGIWAMATLRRSPAAARLA GGRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI256219598, Length=342, Percent_Identity=26.3157894736842, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI4503847, Length=342, Percent_Identity=26.3157894736842, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI256219483, Length=342, Percent_Identity=26.3157894736842, Blast_Score=68, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42403; Mature: 42272
Theoretical pI: Translated: 11.13; Mature: 11.13
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTIPFRQAGFVVTVLAVSVLLAKGTWFSASAVIPALTAEWALNDTVRAWLTMSVQLGFA CCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CGAFISAVLGLADRWPTHWFFAGSALLAALCTALIAWWANGPLLALPLRFLTGMALAGVY HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH PVGMKIMATWTQRGRGLAIGVLVGALTVGSASPHLLNVMGGIDDWRRTLLMAAGLAVVGG HHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHH LIVALMVREGPLRTAAPRFSWSQVVDVARERPVLLANLGYLGHMWELYAAWAWLPLFLLA HHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHH SFEERGIAASWAGLVAFAAIAMGGLGSVLAGLLADRIGRTTITIAAMAVSGSCALAIGFT HHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEEEECCCEEEEEEEC FGGEPWVVAVLAMVWGLTIVADSAQFSAAVSELSPPGRTGTALTLQTSLGFLLTLITIWL CCCCHHHHHHHHHHHHHHHEECCHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHH IPPLVNLVGWRWAFAGLAVGPAIGIWAMATLRRSPAAARLAGGRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCC >Mature Secondary Structure TTIPFRQAGFVVTVLAVSVLLAKGTWFSASAVIPALTAEWALNDTVRAWLTMSVQLGFA CCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CGAFISAVLGLADRWPTHWFFAGSALLAALCTALIAWWANGPLLALPLRFLTGMALAGVY HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH PVGMKIMATWTQRGRGLAIGVLVGALTVGSASPHLLNVMGGIDDWRRTLLMAAGLAVVGG HHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHH LIVALMVREGPLRTAAPRFSWSQVVDVARERPVLLANLGYLGHMWELYAAWAWLPLFLLA HHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHH SFEERGIAASWAGLVAFAAIAMGGLGSVLAGLLADRIGRTTITIAAMAVSGSCALAIGFT HHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEEEECCCEEEEEEEC FGGEPWVVAVLAMVWGLTIVADSAQFSAAVSELSPPGRTGTALTLQTSLGFLLTLITIWL CCCCHHHHHHHHHHHHHHHEECCHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHH IPPLVNLVGWRWAFAGLAVGPAIGIWAMATLRRSPAAARLAGGRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA