| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526517
Identifier: 222526517
GI number: 222526517
Start: 4093058
End: 4094038
Strand: Direct
Name: 222526517
Synonym: Chy400_3284
Alternate gene names: NA
Gene position: 4093058-4094038 (Clockwise)
Preceding gene: 222526516
Following gene: 222526530
Centisome position: 77.68
GC content: 56.57
Gene sequence:
>981_bases ATGACATGGAATGACGAAGAACATCGTCGCTTGCTGGTAAGCACGAGTATCGGGTATACGGCGTACACTGCCTGGGCACG GCAGGCTCGCCGTGAACGACTGTTTAACATCGCCCGTTTGCTTGATGCGTCGGCAGCGGTTAAACGGGTTCGTGCCGAGC AGTCGTTGCGGCGTCTGGGTGAAGTCGCGAAGACGACGACCAACATTGAGCGGGCACTTGCCGGTCTCGAACCAGAAGCC GTTGTCACCGGCCCTGTCACCGGTACCAGCGCATTTCAACGCGAGTTACTGGAGCGTGCAGCACGAGCACTGGCCGCGGG ACGCGATCTGATCTACACCGAGTTAGGTGATCTCTTTGTATGCAGTATGTGTGGTCAGTTGATGGAAGGTGATCCACTTC CATTCTGCTCCATCTGTGGCACGGTGCGTGAGGGGTTTCTGGATTTTCGGATTGTCGATTGTATGGGGACATTAGGCCCC TCTACAATTGTACGTCGCCTCGAACAGGGCCTCCGCACTGTGCAGGATCTGGTTGTCGATCTGACTGAAGAGCAGCTTTC AACCCCGGTGAATGGCTTTCCTGCCTGTAAAGACCTGATCGGCCATCTGACCGACATGGACATCGTCTTTCGCGAGCGGG CATGGATGATTCTTGAGACGAACCAGCCCAGGCTGCCCTCAGCCCATCCGCCAACCTTGCAGCACGCCGTGAAGTATCGC ACGGTACCAATTGCTGATCTCCTCGAACAGTACACCTCAAGCCGACAACAGACACTCAACCTGCTTCGCGGTTTGACCCA GGCTGCCTGGCAGCGCATCGGCTACCACGCGATATTCGGCCCGGTCCCCCTGCTGCATCAAGGAAACTGGGTGGTCACAC ACGAACAGGGGCATCTGATTGAACTGGCGCAAATGCGGCACAATTTGTTGCATGGCGGCAATCAGATGATCGAGATTGCG CAGGAAGTGCTGCATCCATAG
Upstream 100 bases:
>100_bases TCCATCCGAAAGCCGGCGGACAGGGTGTATTGGTTGAGCTAGTGCAACATCGTTCCCCACATCACAGGTAAGTCAAGAAA ACAGATTTGGAGCAGCATGT
Downstream 100 bases:
>100_bases CCGGCACCGGCAATTGTCAGAAATAGTAACGGGGCGACCTTCCAGTCGCCCCGTCATGCATGAGAGTGTTTCAGTTGCGC TTACGTTAAATCTAACCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MTWNDEEHRRLLVSTSIGYTAYTAWARQARRERLFNIARLLDASAAVKRVRAEQSLRRLGEVAKTTTNIERALAGLEPEA VVTGPVTGTSAFQRELLERAARALAAGRDLIYTELGDLFVCSMCGQLMEGDPLPFCSICGTVREGFLDFRIVDCMGTLGP STIVRRLEQGLRTVQDLVVDLTEEQLSTPVNGFPACKDLIGHLTDMDIVFRERAWMILETNQPRLPSAHPPTLQHAVKYR TVPIADLLEQYTSSRQQTLNLLRGLTQAAWQRIGYHAIFGPVPLLHQGNWVVTHEQGHLIELAQMRHNLLHGGNQMIEIA QEVLHP
Sequences:
>Translated_326_residues MTWNDEEHRRLLVSTSIGYTAYTAWARQARRERLFNIARLLDASAAVKRVRAEQSLRRLGEVAKTTTNIERALAGLEPEA VVTGPVTGTSAFQRELLERAARALAAGRDLIYTELGDLFVCSMCGQLMEGDPLPFCSICGTVREGFLDFRIVDCMGTLGP STIVRRLEQGLRTVQDLVVDLTEEQLSTPVNGFPACKDLIGHLTDMDIVFRERAWMILETNQPRLPSAHPPTLQHAVKYR TVPIADLLEQYTSSRQQTLNLLRGLTQAAWQRIGYHAIFGPVPLLHQGNWVVTHEQGHLIELAQMRHNLLHGGNQMIEIA QEVLHP >Mature_325_residues TWNDEEHRRLLVSTSIGYTAYTAWARQARRERLFNIARLLDASAAVKRVRAEQSLRRLGEVAKTTTNIERALAGLEPEAV VTGPVTGTSAFQRELLERAARALAAGRDLIYTELGDLFVCSMCGQLMEGDPLPFCSICGTVREGFLDFRIVDCMGTLGPS TIVRRLEQGLRTVQDLVVDLTEEQLSTPVNGFPACKDLIGHLTDMDIVFRERAWMILETNQPRLPSAHPPTLQHAVKYRT VPIADLLEQYTSSRQQTLNLLRGLTQAAWQRIGYHAIFGPVPLLHQGNWVVTHEQGHLIELAQMRHNLLHGGNQMIEIAQ EVLHP
Specific function: Unknown
COG id: COG1592
COG function: function code C; Rubrerythrin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36547; Mature: 36415
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWNDEEHRRLLVSTSIGYTAYTAWARQARRERLFNIARLLDASAAVKRVRAEQSLRRLG CCCCCCHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVAKTTTNIERALAGLEPEAVVTGPVTGTSAFQRELLERAARALAAGRDLIYTELGDLFV HHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH CSMCGQLMEGDPLPFCSICGTVREGFLDFRIVDCMGTLGPSTIVRRLEQGLRTVQDLVVD HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LTEEQLSTPVNGFPACKDLIGHLTDMDIVFRERAWMILETNQPRLPSAHPPTLQHAVKYR HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHC TVPIADLLEQYTSSRQQTLNLLRGLTQAAWQRIGYHAIFGPVPLLHQGNWVVTHEQGHLI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEECCCEEEECCCCCHH ELAQMRHNLLHGGNQMIEIAQEVLHP HHHHHHHHHHHCCHHHHHHHHHHHCC >Mature Secondary Structure TWNDEEHRRLLVSTSIGYTAYTAWARQARRERLFNIARLLDASAAVKRVRAEQSLRRLG CCCCCHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVAKTTTNIERALAGLEPEAVVTGPVTGTSAFQRELLERAARALAAGRDLIYTELGDLFV HHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH CSMCGQLMEGDPLPFCSICGTVREGFLDFRIVDCMGTLGPSTIVRRLEQGLRTVQDLVVD HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LTEEQLSTPVNGFPACKDLIGHLTDMDIVFRERAWMILETNQPRLPSAHPPTLQHAVKYR HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHC TVPIADLLEQYTSSRQQTLNLLRGLTQAAWQRIGYHAIFGPVPLLHQGNWVVTHEQGHLI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEECCCEEEECCCCCHH ELAQMRHNLLHGGNQMIEIAQEVLHP HHHHHHHHHHHCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA