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The map label for this gene is rsmC [H]

Identifier: 222526494

GI number: 222526494

Start: 4067477

End: 4068100

Strand: Direct

Name: rsmC [H]

Synonym: Chy400_3261

Alternate gene names: 222526494

Gene position: 4067477-4068100 (Clockwise)

Preceding gene: 222526493

Following gene: 222526495

Centisome position: 77.2

GC content: 54.17

Gene sequence:

>624_bases
ATGAACAGTAATCTCGTTCCGTTCGATCCCTATTACAAGAAGCGGATCACGTATGTATGGCGTGGTCAGCAGTTTGCATT
CGATGTGGCGCATACGATCTTCTCTTCGTTTCAGATCGATGAAGGGACTGATTTACTGCTGCGTCTGATCGAGCCGGCAT
TCCCGGAACCACAGCGTATTCTCGATGTGGGTTGCGGTTGCGGAGTCATCGGGATTTGCCTTGCCCGCCGCTTTCCGCAG
GCTGATGTGACTCTAGTCGATAAAGACCTGCTTGCCGTGCGCTACGCTCGTCACAATGCCGAATTGAACGCCACAACGAA
TGTAACCGTCCTTGGCAGCGTCGGTTTGAGCGAGGCGCCTCCCGGCCCATACGATTTAATTGTCTCGAACATCCCGGCAA
AGATTGGTGACTACGCTATCGAGCATGAGTTCATTCTGGAACCGTTGCGCCATTTACGTCCCGGCGGCGAATACTGGTTT
GTTGTTGTGAGCGGCCTCAACCACCTGATACCCCGCCTTGGGCCGCGCCACAATCTGCGTCTCAAAGAGATCAAGAAGCG
GGCTGGTCATTCGGTGTACCGCATTATCGCGCCAGCAGCTACGGTACCAACAGGAGGCTTATGA

Upstream 100 bases:

>100_bases
CACCTGATTCAGGACACCTCTCTCGACTACACGATGCATATGGACGAAGTATTCCGCGCTATTCAACACGAGCGGTTAGT
CAATCCGCCCAAACTTGACG

Downstream 100 bases:

>100_bases
TCTACACCGATCCCCGGCAAGCGGTCGAACCGATCCGGTCACTGCTGGATCAGACTCAACGGATTCTGGTGCTGAGCCAC
GTGAATCCTGATGGTGATGC

Product: methyltransferase small

Products: NA

Alternate protein names: 16S rRNA m2G1207 methyltransferase; rRNA (guanine-N(2)-)-methyltransferase rsmC [H]

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MNSNLVPFDPYYKKRITYVWRGQQFAFDVAHTIFSSFQIDEGTDLLLRLIEPAFPEPQRILDVGCGCGVIGICLARRFPQ
ADVTLVDKDLLAVRYARHNAELNATTNVTVLGSVGLSEAPPGPYDLIVSNIPAKIGDYAIEHEFILEPLRHLRPGGEYWF
VVVSGLNHLIPRLGPRHNLRLKEIKKRAGHSVYRIIAPAATVPTGGL

Sequences:

>Translated_207_residues
MNSNLVPFDPYYKKRITYVWRGQQFAFDVAHTIFSSFQIDEGTDLLLRLIEPAFPEPQRILDVGCGCGVIGICLARRFPQ
ADVTLVDKDLLAVRYARHNAELNATTNVTVLGSVGLSEAPPGPYDLIVSNIPAKIGDYAIEHEFILEPLRHLRPGGEYWF
VVVSGLNHLIPRLGPRHNLRLKEIKKRAGHSVYRIIAPAATVPTGGL
>Mature_207_residues
MNSNLVPFDPYYKKRITYVWRGQQFAFDVAHTIFSSFQIDEGTDLLLRLIEPAFPEPQRILDVGCGCGVIGICLARRFPQ
ADVTLVDKDLLAVRYARHNAELNATTNVTVLGSVGLSEAPPGPYDLIVSNIPAKIGDYAIEHEFILEPLRHLRPGGEYWF
VVVSGLNHLIPRLGPRHNLRLKEIKKRAGHSVYRIIAPAATVPTGGL

Specific function: Specifically methylates the guanosine in position 1207 of 16S rRNA in the 30S particle [H]

COG id: COG2813

COG function: function code J; 16S RNA G1207 methylase RsmC

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002295
- InterPro:   IPR002052
- InterPro:   IPR013675
- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS; PF08468 MTS_N [H]

EC number: =2.1.1.172 [H]

Molecular weight: Translated: 23023; Mature: 23023

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSNLVPFDPYYKKRITYVWRGQQFAFDVAHTIFSSFQIDEGTDLLLRLIEPAFPEPQRI
CCCCCCCCCHHHHHEEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHH
LDVGCGCGVIGICLARRFPQADVTLVDKDLLAVRYARHNAELNATTNVTVLGSVGLSEAP
HHCCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCC
PGPYDLIVSNIPAKIGDYAIEHEFILEPLRHLRPGGEYWFVVVSGLNHLIPRLGPRHNLR
CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCCCCCH
LKEIKKRAGHSVYRIIAPAATVPTGGL
HHHHHHHHCCCEEEEEECCCCCCCCCC
>Mature Secondary Structure
MNSNLVPFDPYYKKRITYVWRGQQFAFDVAHTIFSSFQIDEGTDLLLRLIEPAFPEPQRI
CCCCCCCCCHHHHHEEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHH
LDVGCGCGVIGICLARRFPQADVTLVDKDLLAVRYARHNAELNATTNVTVLGSVGLSEAP
HHCCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCC
PGPYDLIVSNIPAKIGDYAIEHEFILEPLRHLRPGGEYWFVVVSGLNHLIPRLGPRHNLR
CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCCCCCH
LKEIKKRAGHSVYRIIAPAATVPTGGL
HHHHHHHHCCCEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA